RNA–Protein interactions for RNA: ENST00000470083.5

LSM2-209, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 641 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-209ENST00000470083 GSDMAQ96QA5 445 aa11.9□□□□□ -0.5
LSM2-209ENST00000470083 RUFY1Q96T51 708 aa11.9□□□□□ -0.5
LSM2-209ENST00000470083 NUDT9Q9BW91 350 aa11.9□□□□□ -0.5
LSM2-209ENST00000470083 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.9□□□□□ -0.5
LSM2-209ENST00000470083 MAGEB5Q9BZ81 275 aa11.9□□□□□ -0.5
LSM2-209ENST00000470083 RAB6CQ9H0N0 254 aa11.9□□□□□ -0.5
LSM2-209ENST00000470083 PDFQ9HBH1 243 aa11.9□□□□□ -0.5
LSM2-209ENST00000470083 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.9□□□□□ -0.5
LSM2-209ENST00000470083 DIDO1Q9BTC0 2240 aaKnown RBP11.9□□□□□ -0.51
LSM2-209ENST00000470083 SSU72P8A0A1W2PR75 194 aa11.89□□□□□ -0.51
LSM2-209ENST00000470083 GOLGA6CA6NDK9 693 aa11.89□□□□□ -0.51
LSM2-209ENST00000470083 GOLGA6BA6NDN3 693 aa11.89□□□□□ -0.51
LSM2-209ENST00000470083 LILRA5A6NI73 299 aa11.89□□□□□ -0.51
LSM2-209ENST00000470083 WASH4PA8MWX3 477 aa11.89□□□□□ -0.51
LSM2-209ENST00000470083 GOLGA8SH3BPF8 625 aa11.89□□□□□ -0.51
LSM2-209ENST00000470083 K7ELQ4 463 aaPredicted RBP11.89□□□□□ -0.51
LSM2-209ENST00000470083 TRAFD1O14545 582 aaPredicted RBP11.89□□□□□ -0.51
LSM2-209ENST00000470083 GOLGA6DP0CG33 693 aa11.89□□□□□ -0.51
LSM2-209ENST00000470083 LPOP22079 712 aaPredicted RBP11.89□□□□□ -0.51
LSM2-209ENST00000470083 ITGA3P26006 1051 aa11.89□□□□□ -0.51
LSM2-209ENST00000470083 EPHB2P29323 1055 aa11.89□□□□□ -0.51
LSM2-209ENST00000470083 ETV3P41162 512 aa11.89□□□□□ -0.51
LSM2-209ENST00000470083 PTGIRP43119 386 aa11.89□□□□□ -0.51
LSM2-209ENST00000470083 RPS18P62269 152 aaKnown RBP11.89□□□□□ -0.51
LSM2-209ENST00000470083 CDK18Q07002 472 aa11.89□□□□□ -0.51
LSM2-209ENST00000470083 BCL2L1Q07817 233 aa11.89□□□□□ -0.51
LSM2-209ENST00000470083 LAMB3Q13751 1172 aa11.89□□□□□ -0.51
LSM2-209ENST00000470083 IYDQ6PHW0 289 aa11.89□□□□□ -0.51
LSM2-209ENST00000470083 PHLDB2Q86SQ0 1253 aa11.89□□□□□ -0.51
LSM2-209ENST00000470083 SLC9B2Q86UD5 537 aa11.89□□□□□ -0.51
LSM2-209ENST00000470083 PPP1R3BQ86XI6 285 aa11.89□□□□□ -0.51
LSM2-209ENST00000470083 GALNT13Q8IUC8 556 aa11.89□□□□□ -0.51
LSM2-209ENST00000470083 CBARPQ8N350 705 aaPredicted RBP11.89□□□□□ -0.51
LSM2-209ENST00000470083 CISD2Q8N5K1 135 aaKnown RBP11.89□□□□□ -0.51
LSM2-209ENST00000470083 PAF1Q8N7H5 531 aa11.89□□□□□ -0.51
LSM2-209ENST00000470083 SPOCK2Q92563 424 aa11.89□□□□□ -0.51
LSM2-209ENST00000470083 DHTKD1Q96HY7 919 aaPredicted RBP11.89□□□□□ -0.51
LSM2-209ENST00000470083 SPATA32Q96LK8 384 aa11.89□□□□□ -0.51
LSM2-209ENST00000470083 SMAD5Q99717 465 aaKnown RBP11.89□□□□□ -0.51
LSM2-209ENST00000470083 BARD1Q99728 777 aaKnown RBP11.89□□□□□ -0.51
LSM2-209ENST00000470083 TBC1D10AQ9BXI6 508 aa11.89□□□□□ -0.51
LSM2-209ENST00000470083 GOLPH3LQ9H4A5 285 aa11.89□□□□□ -0.51
LSM2-209ENST00000470083 GOLGA6AQ9NYA3 693 aa11.89□□□□□ -0.51
LSM2-209ENST00000470083 APEX2Q9UBZ4 518 aa11.89□□□□□ -0.51
LSM2-209ENST00000470083 PRSS44E7EML9 344 aa11.88□□□□□ -0.51
LSM2-209ENST00000470083 HEXIM1O94992 359 aaKnown RBP11.88□□□□□ -0.51
LSM2-209ENST00000470083 SEPHS1P49903 392 aa11.88□□□□□ -0.51
LSM2-209ENST00000470083 RPS15P62841 145 aaKnown RBP11.88□□□□□ -0.51
LSM2-209ENST00000470083 STIM1Q13586 685 aa11.88□□□□□ -0.51
LSM2-209ENST00000470083 CDO1Q16878 200 aa11.88□□□□□ -0.51
LSM2-209ENST00000470083 PLEKHN1Q494U1 663 aaPredicted RBP11.88□□□□□ -0.51
LSM2-209ENST00000470083 ERICH6BQ5W0A0 696 aa11.88□□□□□ -0.51
LSM2-209ENST00000470083 TTI2Q6NXR4 508 aa11.88□□□□□ -0.51
LSM2-209ENST00000470083 CYB5D1Q6P9G0 228 aa11.88□□□□□ -0.51
LSM2-209ENST00000470083 GDF7Q7Z4P5 450 aa11.88□□□□□ -0.51
LSM2-209ENST00000470083 HSD11B1LQ7Z5J1 315 aa11.88□□□□□ -0.51
LSM2-209ENST00000470083 UMODL1-AS1Q8N2C9 162 aa11.88□□□□□ -0.51
LSM2-209ENST00000470083 EMC1Q8N766 993 aa11.88□□□□□ -0.51
LSM2-209ENST00000470083 AVL9Q8NBF6 648 aa11.88□□□□□ -0.51
LSM2-209ENST00000470083 TSEN2Q8NCE0 465 aaKnown RBP11.88□□□□□ -0.51
LSM2-209ENST00000470083 HERPUD2Q9BSE4 406 aa11.88□□□□□ -0.51
LSM2-209ENST00000470083 CRACR2AQ9BSW2 395 aa11.88□□□□□ -0.51
LSM2-209ENST00000470083 SCAND2PQ9GZW5 306 aaPredicted RBP11.88□□□□□ -0.51
LSM2-209ENST00000470083 GPR83Q9NYM4 423 aa11.88□□□□□ -0.51
LSM2-209ENST00000470083 CNOT8Q9UFF9 292 aaKnown RBP11.88□□□□□ -0.51
LSM2-209ENST00000470083 TBC1D29Q9UFV1 150 aa11.88□□□□□ -0.51
LSM2-209ENST00000470083 B3GNT3Q9Y2A9 372 aa11.88□□□□□ -0.51
LSM2-209ENST00000470083 TMEM98Q9Y2Y6 226 aa11.88□□□□□ -0.51
LSM2-209ENST00000470083 DCHS2Q6V1P9 2916 aa11.88□□□□□ -0.51
LSM2-209ENST00000470083 CROCCQ5TZA2 2017 aa11.87□□□□□ -0.51
LSM2-209ENST00000470083 MED13LQ71F56 2210 aa11.87□□□□□ -0.51
LSM2-209ENST00000470083 KIR2DS5A0A0G2JLQ3 304 aa11.87□□□□□ -0.51
LSM2-209ENST00000470083 A0A0G2JNG1 304 aa11.87□□□□□ -0.51
LSM2-209ENST00000470083 J3KR12 359 aa11.87□□□□□ -0.51
LSM2-209ENST00000470083 KIR2DS3K7RE56 304 aa11.87□□□□□ -0.51
LSM2-209ENST00000470083 PSMD11O00231 422 aa11.87□□□□□ -0.51
LSM2-209ENST00000470083 LRRTM2O43300 516 aa11.87□□□□□ -0.51
LSM2-209ENST00000470083 PRAMEF11O60813 436 aa11.87□□□□□ -0.51
LSM2-209ENST00000470083 TIAF1O95411 115 aa11.87□□□□□ -0.51
LSM2-209ENST00000470083 GNA14O95837 355 aa11.87□□□□□ -0.51
LSM2-209ENST00000470083 SOD1P00441 154 aa11.87□□□□□ -0.51
LSM2-209ENST00000470083 SLC2A4P14672 509 aa11.87□□□□□ -0.51
LSM2-209ENST00000470083 VIPR1P32241 457 aa11.87□□□□□ -0.51
LSM2-209ENST00000470083 PTGER4P35408 488 aa11.87□□□□□ -0.51
LSM2-209ENST00000470083 CLCN1P35523 988 aa11.87□□□□□ -0.51
LSM2-209ENST00000470083 APBA1Q02410 837 aa11.87□□□□□ -0.51
LSM2-209ENST00000470083 DPTQ07507 201 aa11.87□□□□□ -0.51
LSM2-209ENST00000470083 PKP1Q13835 747 aa11.87□□□□□ -0.51
LSM2-209ENST00000470083 KIR2DS5Q14953 304 aa11.87□□□□□ -0.51
LSM2-209ENST00000470083 C15orf59Q2T9L4 293 aaPredicted RBP11.87□□□□□ -0.51
LSM2-209ENST00000470083 C2CD6Q53TS8 623 aa11.87□□□□□ -0.51
LSM2-209ENST00000470083 DENND2CQ68D51 928 aa11.87□□□□□ -0.51
LSM2-209ENST00000470083 ADAMTSL4Q6UY14 1074 aa11.87□□□□□ -0.51
LSM2-209ENST00000470083 Q6ZVL8 140 aa11.87□□□□□ -0.51
LSM2-209ENST00000470083 MARK2Q7KZI7 788 aaKnown RBP11.87□□□□□ -0.51
LSM2-209ENST00000470083 PRSS42Q7Z5A4 293 aa11.87□□□□□ -0.51
LSM2-209ENST00000470083 LZTR1Q8N653 840 aa11.87□□□□□ -0.51
LSM2-209ENST00000470083 CCDC185Q8N715 623 aa11.87□□□□□ -0.51
LSM2-209ENST00000470083 GLIS1Q8NBF1 620 aa11.87□□□□□ -0.51
LSM2-209ENST00000470083 ST6GALNAC3Q8NDV1 305 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms