RNA–Protein interactions for RNA: ENST00000467062.5

SNAPC3-205, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-205ENST00000467062 SPATA17Q96L03 361 aa18.02■□□□□ 0.48
SNAPC3-205ENST00000467062 APBA2Q99767 749 aa18.02■□□□□ 0.48
SNAPC3-205ENST00000467062 RTP3Q9BQQ7 232 aa18.02■□□□□ 0.48
SNAPC3-205ENST00000467062 SP140LQ9H930 580 aa18.02■□□□□ 0.48
SNAPC3-205ENST00000467062 NDFIP2Q9NV92 336 aa18.02■□□□□ 0.48
SNAPC3-205ENST00000467062 A0A096LPK6 155 aa18.02■□□□□ 0.47
SNAPC3-205ENST00000467062 AURKAO14965 403 aa18.02■□□□□ 0.47
SNAPC3-205ENST00000467062 DYRK3O43781 588 aa18.02■□□□□ 0.47
SNAPC3-205ENST00000467062 IDH3BO43837 385 aa18.02■□□□□ 0.47
SNAPC3-205ENST00000467062 H2AFYO75367 372 aaKnown RBP18.02■□□□□ 0.47
SNAPC3-205ENST00000467062 GARSP41250 739 aaKnown RBP18.02■□□□□ 0.47
SNAPC3-205ENST00000467062 GNG2P59768 71 aa18.02■□□□□ 0.47
SNAPC3-205ENST00000467062 TAF1CQ15572 869 aaPredicted RBP18.02■□□□□ 0.47
SNAPC3-205ENST00000467062 HCAR2Q8TDS4 363 aa18.02■□□□□ 0.47
SNAPC3-205ENST00000467062 MTRRQ9UBK8 725 aa18.02■□□□□ 0.47
SNAPC3-205ENST00000467062 SFMBT1Q9UHJ3 866 aa18.02■□□□□ 0.47
SNAPC3-205ENST00000467062 SLC39A10Q9ULF5 831 aa18.02■□□□□ 0.47
SNAPC3-205ENST00000467062 PCDHGA7Q9Y5G6 932 aa18.02■□□□□ 0.47
SNAPC3-205ENST00000467062 MKI67P46013 3256 aaKnown RBP18.01■□□□□ 0.47
SNAPC3-205ENST00000467062 TCAF2A6NFQ2 919 aa18.01■□□□□ 0.47
SNAPC3-205ENST00000467062 SYCE1LA8MT33 242 aa18.01■□□□□ 0.47
SNAPC3-205ENST00000467062 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.01■□□□□ 0.47
SNAPC3-205ENST00000467062 ACOX3O15254 700 aa18.01■□□□□ 0.47
SNAPC3-205ENST00000467062 HOXC11O43248 304 aaPredicted RBP18.01■□□□□ 0.47
SNAPC3-205ENST00000467062 TNK2Q07912 1038 aa18.01■□□□□ 0.47
SNAPC3-205ENST00000467062 ZNF460Q14592 562 aa18.01■□□□□ 0.47
SNAPC3-205ENST00000467062 ARHGEF6Q15052 776 aa18.01■□□□□ 0.47
SNAPC3-205ENST00000467062 AASDHQ4L235 1098 aaPredicted RBP18.01■□□□□ 0.47
SNAPC3-205ENST00000467062 TMEM135Q86UB9 458 aa18.01■□□□□ 0.47
SNAPC3-205ENST00000467062 GRAMD2AQ8IUY3 354 aa18.01■□□□□ 0.47
SNAPC3-205ENST00000467062 DHRSXQ8N5I4 330 aa18.01■□□□□ 0.47
SNAPC3-205ENST00000467062 ANGPTL6Q8NI99 470 aa18.01■□□□□ 0.47
SNAPC3-205ENST00000467062 RASSF5Q8WWW0 418 aa18.01■□□□□ 0.47
SNAPC3-205ENST00000467062 CSF3RQ99062 836 aa18.01■□□□□ 0.47
SNAPC3-205ENST00000467062 RBBP8Q99708 897 aa18.01■□□□□ 0.47
SNAPC3-205ENST00000467062 DNAI2Q9GZS0 605 aa18.01■□□□□ 0.47
SNAPC3-205ENST00000467062 IFT80Q9P2H3 777 aaPredicted RBP18.01■□□□□ 0.47
SNAPC3-205ENST00000467062 TESMINQ9Y4I5 508 aa18.01■□□□□ 0.47
SNAPC3-205ENST00000467062 SNPHO15079 494 aa18.01■□□□□ 0.47
SNAPC3-205ENST00000467062 PRKCAP17252 672 aa18.01■□□□□ 0.47
SNAPC3-205ENST00000467062 EEF1B2P24534 225 aaKnown RBP18.01■□□□□ 0.47
SNAPC3-205ENST00000467062 IFNA8P32881 189 aa18.01■□□□□ 0.47
SNAPC3-205ENST00000467062 CAPGP40121 348 aa18.01■□□□□ 0.47
SNAPC3-205ENST00000467062 LHX1P48742 406 aa18.01■□□□□ 0.47
SNAPC3-205ENST00000467062 CLK3P49761 638 aaKnown RBP18.01■□□□□ 0.47
SNAPC3-205ENST00000467062 COPZ1P61923 177 aa18.01■□□□□ 0.47
SNAPC3-205ENST00000467062 MRPS6P82932 125 aaKnown RBP18.01■□□□□ 0.47
SNAPC3-205ENST00000467062 BROXQ5VW32 411 aa18.01■□□□□ 0.47
SNAPC3-205ENST00000467062 CYP2R1Q6VVX0 501 aa18.01■□□□□ 0.47
SNAPC3-205ENST00000467062 TFAP2DQ7Z6R9 452 aa18.01■□□□□ 0.47
SNAPC3-205ENST00000467062 KCNMB4Q86W47 210 aa18.01■□□□□ 0.47
SNAPC3-205ENST00000467062 SFRP1Q8N474 314 aa18.01■□□□□ 0.47
SNAPC3-205ENST00000467062 STON2Q8WXE9 905 aa18.01■□□□□ 0.47
SNAPC3-205ENST00000467062 FBXL20Q96IG2 436 aa18.01■□□□□ 0.47
SNAPC3-205ENST00000467062 EGLN2Q96KS0 407 aa18.01■□□□□ 0.47
SNAPC3-205ENST00000467062 CPNE1Q99829 537 aa18.01■□□□□ 0.47
SNAPC3-205ENST00000467062 TAF4O00268 1085 aa18■□□□□ 0.47
SNAPC3-205ENST00000467062 ICMTO60725 284 aa18■□□□□ 0.47
SNAPC3-205ENST00000467062 C2P06681 752 aa18■□□□□ 0.47
SNAPC3-205ENST00000467062 TSPY1Q01534 308 aa18■□□□□ 0.47
SNAPC3-205ENST00000467062 POU6F1Q14863 301 aa18■□□□□ 0.47
SNAPC3-205ENST00000467062 SPANXN3Q5MJ09 141 aa18■□□□□ 0.47
SNAPC3-205ENST00000467062 KCTD11Q693B1 232 aa18■□□□□ 0.47
SNAPC3-205ENST00000467062 GTF2IRD2BQ6EKJ0 949 aa18■□□□□ 0.47
SNAPC3-205ENST00000467062 GTF2IRD2Q86UP8 949 aa18■□□□□ 0.47
SNAPC3-205ENST00000467062 MUC3BQ9H195 1237 aa18■□□□□ 0.47
SNAPC3-205ENST00000467062 ENPP5Q9UJA9 477 aa18■□□□□ 0.47
SNAPC3-205ENST00000467062 TANC1Q9C0D5 1861 aa18■□□□□ 0.47
SNAPC3-205ENST00000467062 E7ENX8 843 aa18■□□□□ 0.47
SNAPC3-205ENST00000467062 M0QZ92 97 aa18■□□□□ 0.47
SNAPC3-205ENST00000467062 TRIM24O15164 1050 aa18■□□□□ 0.47
SNAPC3-205ENST00000467062 TIMM44O43615 452 aa18■□□□□ 0.47
SNAPC3-205ENST00000467062 MOCS2O96007 188 aaPredicted RBP18■□□□□ 0.47
SNAPC3-205ENST00000467062 OR4Q2P0C623 313 aa18■□□□□ 0.47
SNAPC3-205ENST00000467062 CD52P31358 61 aa18■□□□□ 0.47
SNAPC3-205ENST00000467062 HUNKP57058 714 aa18■□□□□ 0.47
SNAPC3-205ENST00000467062 ECT2LQ008S8 904 aa18■□□□□ 0.47
SNAPC3-205ENST00000467062 RAB41Q5JT25 222 aa18■□□□□ 0.47
SNAPC3-205ENST00000467062 GRTP1Q5TC63 336 aa18■□□□□ 0.47
SNAPC3-205ENST00000467062 CST9Q5W186 159 aa18■□□□□ 0.47
SNAPC3-205ENST00000467062 NXNQ6DKJ4 435 aa18■□□□□ 0.47
SNAPC3-205ENST00000467062 GET4Q7L5D6 327 aaPredicted RBP18■□□□□ 0.47
SNAPC3-205ENST00000467062 PCDH20Q8N6Y1 951 aaKnown RBP18■□□□□ 0.47
SNAPC3-205ENST00000467062 TRPV1Q8NER1 839 aa18■□□□□ 0.47
SNAPC3-205ENST00000467062 NAT9Q9BTE0 207 aa18■□□□□ 0.47
SNAPC3-205ENST00000467062 CASS4Q9NQ75 786 aa18■□□□□ 0.47
SNAPC3-205ENST00000467062 FBXO9Q9UK97 447 aaPredicted RBP18■□□□□ 0.47
SNAPC3-205ENST00000467062 CDYLQ9Y232 598 aa18■□□□□ 0.47
SNAPC3-205ENST00000467062 DGKBQ9Y6T7 804 aa18■□□□□ 0.47
SNAPC3-205ENST00000467062 TTC3P53804 2025 aa18■□□□□ 0.47
SNAPC3-205ENST00000467062 TK2O00142 265 aa17.99■□□□□ 0.47
SNAPC3-205ENST00000467062 CHRNGP07510 517 aa17.99■□□□□ 0.47
SNAPC3-205ENST00000467062 CDH1P12830 882 aa17.99■□□□□ 0.47
SNAPC3-205ENST00000467062 SPRP35270 261 aaPredicted RBP17.99■□□□□ 0.47
SNAPC3-205ENST00000467062 POLR2IP36954 125 aaKnown RBP17.99■□□□□ 0.47
SNAPC3-205ENST00000467062 GRM3Q14832 879 aa17.99■□□□□ 0.47
SNAPC3-205ENST00000467062 UPP1Q16831 310 aa17.99■□□□□ 0.47
SNAPC3-205ENST00000467062 C6orf10Q5SRN2 563 aa17.99■□□□□ 0.47
SNAPC3-205ENST00000467062 CRTC3Q6UUV7 619 aa17.99■□□□□ 0.47
SNAPC3-205ENST00000467062 PDZD4Q76G19 769 aaPredicted RBP17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms