RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 GLT6D1Q7Z4J2 308 aa16.06■□□□□ 0.16
CD28-203ENST00000458610 TAF8Q7Z7C8 310 aa16.06■□□□□ 0.16
CD28-203ENST00000458610 LINC00523Q86TU6 105 aa16.06■□□□□ 0.16
CD28-203ENST00000458610 PELI3Q8N2H9 469 aa16.06■□□□□ 0.16
CD28-203ENST00000458610 PNPLA1Q8N8W4 532 aa16.06■□□□□ 0.16
CD28-203ENST00000458610 CCDC89Q8N998 374 aa16.06■□□□□ 0.16
CD28-203ENST00000458610 BLOC1S5Q8TDH9 187 aa16.06■□□□□ 0.16
CD28-203ENST00000458610 C1orf54Q8WWF1 131 aa16.06■□□□□ 0.16
CD28-203ENST00000458610 ATG4AQ8WYN0 398 aa16.06■□□□□ 0.16
CD28-203ENST00000458610 RTP4Q96DX8 246 aa16.06■□□□□ 0.16
CD28-203ENST00000458610 PLEKHG4BQ96PX9 1271 aa16.06■□□□□ 0.16
CD28-203ENST00000458610 TBL1YQ9BQ87 522 aa16.06■□□□□ 0.16
CD28-203ENST00000458610 GSDMCQ9BYG8 508 aa16.06■□□□□ 0.16
CD28-203ENST00000458610 FRMD8Q9BZ67 464 aaPredicted RBP16.06■□□□□ 0.16
CD28-203ENST00000458610 TCEAL2Q9H3H9 227 aaPredicted RBP16.06■□□□□ 0.16
CD28-203ENST00000458610 LRRC40Q9H9A6 602 aa16.06■□□□□ 0.16
CD28-203ENST00000458610 RMI1Q9H9A7 625 aa16.06■□□□□ 0.16
CD28-203ENST00000458610 CARS2Q9HA77 564 aaKnown RBP16.06■□□□□ 0.16
CD28-203ENST00000458610 VPS18Q9P253 973 aa16.06■□□□□ 0.16
CD28-203ENST00000458610 INPP4BO15327 924 aa16.05■□□□□ 0.16
CD28-203ENST00000458610 CRTAMO95727 393 aa16.05■□□□□ 0.16
CD28-203ENST00000458610 GAS8O95995 478 aa16.05■□□□□ 0.16
CD28-203ENST00000458610 SLC4A1P02730 911 aa16.05■□□□□ 0.16
CD28-203ENST00000458610 GP1BAP07359 652 aa16.05■□□□□ 0.16
CD28-203ENST00000458610 ADRA1AP35348 466 aa16.05■□□□□ 0.16
CD28-203ENST00000458610 FDFT1P37268 417 aa16.05■□□□□ 0.16
CD28-203ENST00000458610 ACADVLP49748 655 aa16.05■□□□□ 0.16
CD28-203ENST00000458610 DNAJC3Q13217 504 aa16.05■□□□□ 0.16
CD28-203ENST00000458610 SNX1Q13596 522 aa16.05■□□□□ 0.16
CD28-203ENST00000458610 NR0B2Q15466 257 aa16.05■□□□□ 0.16
CD28-203ENST00000458610 OASLQ15646 514 aaKnown RBP16.05■□□□□ 0.16
CD28-203ENST00000458610 CHCHD4Q8N4Q1 142 aa16.05■□□□□ 0.16
CD28-203ENST00000458610 GPR26Q8NDV2 337 aa16.05■□□□□ 0.16
CD28-203ENST00000458610 OR6C4Q8NGE1 309 aa16.05■□□□□ 0.16
CD28-203ENST00000458610 EID2BQ96D98 161 aa16.05■□□□□ 0.16
CD28-203ENST00000458610 PDXPQ96GD0 296 aa16.05■□□□□ 0.16
CD28-203ENST00000458610 COX14Q96I36 57 aa16.05■□□□□ 0.16
CD28-203ENST00000458610 AGAP2Q99490 1192 aa16.05■□□□□ 0.16
CD28-203ENST00000458610 CLPBQ9H078 707 aa16.05■□□□□ 0.16
CD28-203ENST00000458610 KCNF1Q9H3M0 494 aa16.05■□□□□ 0.16
CD28-203ENST00000458610 ARNT2Q9HBZ2 717 aa16.05■□□□□ 0.16
CD28-203ENST00000458610 MRPL40Q9NQ50 206 aaKnown RBP16.05■□□□□ 0.16
CD28-203ENST00000458610 TOR4AQ9NXH8 423 aa16.05■□□□□ 0.16
CD28-203ENST00000458610 TRMT1Q9NXH9 659 aaKnown RBP16.05■□□□□ 0.16
CD28-203ENST00000458610 PNMA8BQ9ULN7 279 aaPredicted RBP16.05■□□□□ 0.16
CD28-203ENST00000458610 NEUROG3Q9Y4Z2 214 aa16.05■□□□□ 0.16
CD28-203ENST00000458610 SPO11Q9Y5K1 396 aa16.05■□□□□ 0.16
CD28-203ENST00000458610 COL5A1P20908 1838 aaPredicted RBP16.05■□□□□ 0.16
CD28-203ENST00000458610 CACNA1AO00555 2505 aa16.05■□□□□ 0.16
CD28-203ENST00000458610 GPR89AB7ZAQ6 455 aa16.04■□□□□ 0.16
CD28-203ENST00000458610 E7EVH7 732 aa16.04■□□□□ 0.16
CD28-203ENST00000458610 STX7O15400 261 aaKnown RBP16.04■□□□□ 0.16
CD28-203ENST00000458610 SLC25A14O95258 325 aaPredicted RBP16.04■□□□□ 0.16
CD28-203ENST00000458610 SOD1P00441 154 aa16.04■□□□□ 0.16
CD28-203ENST00000458610 IFNB1P01574 187 aa16.04■□□□□ 0.16
CD28-203ENST00000458610 GPR89BP0CG08 455 aa16.04■□□□□ 0.16
CD28-203ENST00000458610 BPIP17213 487 aa16.04■□□□□ 0.16
CD28-203ENST00000458610 LPOP22079 712 aaPredicted RBP16.04■□□□□ 0.16
CD28-203ENST00000458610 CHRNA4P43681 627 aa16.04■□□□□ 0.16
CD28-203ENST00000458610 GNPDA1P46926 289 aa16.04■□□□□ 0.16
CD28-203ENST00000458610 LMAN1P49257 510 aa16.04■□□□□ 0.16
CD28-203ENST00000458610 CCDC173Q0VFZ6 552 aa16.04■□□□□ 0.16
CD28-203ENST00000458610 LRP8Q14114 963 aa16.04■□□□□ 0.16
CD28-203ENST00000458610 TAF1AQ15573 450 aaPredicted RBP16.04■□□□□ 0.16
CD28-203ENST00000458610 ALS2CLQ60I27 953 aa16.04■□□□□ 0.16
CD28-203ENST00000458610 DOK6Q6PKX4 331 aa16.04■□□□□ 0.16
CD28-203ENST00000458610 GSTA5Q7RTV2 222 aa16.04■□□□□ 0.16
CD28-203ENST00000458610 TMPRSS12Q86WS5 348 aa16.04■□□□□ 0.16
CD28-203ENST00000458610 GALNT13Q8IUC8 556 aa16.04■□□□□ 0.16
CD28-203ENST00000458610 KLHDC8BQ8IXV7 354 aa16.04■□□□□ 0.16
CD28-203ENST00000458610 BRSK1Q8TDC3 778 aa16.04■□□□□ 0.16
CD28-203ENST00000458610 NAT6Q93015 286 aa16.04■□□□□ 0.16
CD28-203ENST00000458610 SCARF2Q96GP6 870 aaPredicted RBP16.04■□□□□ 0.16
CD28-203ENST00000458610 WDR24Q96S15 920 aa16.04■□□□□ 0.16
CD28-203ENST00000458610 C19orf43Q9BQ61 176 aa16.04■□□□□ 0.16
CD28-203ENST00000458610 SCNM1Q9BWG6 230 aa16.04■□□□□ 0.16
CD28-203ENST00000458610 BOCQ9BWV1 1114 aa16.04■□□□□ 0.16
CD28-203ENST00000458610 ABCG4Q9H172 646 aa16.04■□□□□ 0.16
CD28-203ENST00000458610 TRIM39Q9HCM9 518 aa16.04■□□□□ 0.16
CD28-203ENST00000458610 IL17CQ9P0M4 197 aa16.04■□□□□ 0.16
CD28-203ENST00000458610 PAK5Q9P286 719 aa16.04■□□□□ 0.16
CD28-203ENST00000458610 SUFUQ9UMX1 484 aa16.04■□□□□ 0.16
CD28-203ENST00000458610 GPR34Q9UPC5 381 aa16.04■□□□□ 0.16
CD28-203ENST00000458610 TMEM98Q9Y2Y6 226 aa16.04■□□□□ 0.16
CD28-203ENST00000458610 GPSM3Q9Y4H4 160 aa16.04■□□□□ 0.16
CD28-203ENST00000458610 DMXL1Q9Y485 3027 aa16.04■□□□□ 0.16
CD28-203ENST00000458610 LRRK1Q38SD2 2015 aa16.04■□□□□ 0.16
CD28-203ENST00000458610 FAM221BA6H8Z2 402 aa16.03■□□□□ 0.16
CD28-203ENST00000458610 AURKAO14965 403 aa16.03■□□□□ 0.16
CD28-203ENST00000458610 HYAL3O43820 417 aaPredicted RBP16.03■□□□□ 0.16
CD28-203ENST00000458610 METTL18O95568 372 aa16.03■□□□□ 0.16
CD28-203ENST00000458610 CXCR5P32302 372 aa16.03■□□□□ 0.16
CD28-203ENST00000458610 SPAM1P38567 509 aa16.03■□□□□ 0.16
CD28-203ENST00000458610 GDF10P55107 478 aa16.03■□□□□ 0.16
CD28-203ENST00000458610 LAMB3Q13751 1172 aa16.03■□□□□ 0.16
CD28-203ENST00000458610 TMPRSS7Q7RTY8 843 aa16.03■□□□□ 0.16
CD28-203ENST00000458610 PHYKPLQ8IUZ5 450 aa16.03■□□□□ 0.16
CD28-203ENST00000458610 SLC35F6Q8N357 371 aa16.03■□□□□ 0.16
CD28-203ENST00000458610 TTC30BQ8N4P2 665 aa16.03■□□□□ 0.16
CD28-203ENST00000458610 ARL10Q8N8L6 244 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms