RNA–Protein interactions for RNA: ENST00000449058.6

TOM1-210, Transcript of target of myb1 membrane trafficking protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TOM1, Length 2,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-210ENST00000449058 NR5A2O00482 541 aa16.86■□□□□ 0.29
TOM1-210ENST00000449058 RHOBTB1O94844 696 aa16.86■□□□□ 0.29
TOM1-210ENST00000449058 ATP6V0D1P61421 351 aa16.86■□□□□ 0.29
TOM1-210ENST00000449058 CAP1Q01518 475 aa16.86■□□□□ 0.29
TOM1-210ENST00000449058 CLCQ05315 142 aa16.86■□□□□ 0.29
TOM1-210ENST00000449058 LCP2Q13094 533 aa16.86■□□□□ 0.29
TOM1-210ENST00000449058 IKBKEQ14164 716 aa16.86■□□□□ 0.29
TOM1-210ENST00000449058 AFTPHQ6ULP2 937 aa16.86■□□□□ 0.29
TOM1-210ENST00000449058 RNF180Q86T96 592 aa16.86■□□□□ 0.29
TOM1-210ENST00000449058 DHFR2Q86XF0 187 aa16.86■□□□□ 0.29
TOM1-210ENST00000449058 CHERPQ8IWX8 916 aaKnown RBP16.86■□□□□ 0.29
TOM1-210ENST00000449058 ZFRQ96KR1 1074 aaKnown RBP16.86■□□□□ 0.29
TOM1-210ENST00000449058 KCNA7Q96RP8 456 aa16.86■□□□□ 0.29
TOM1-210ENST00000449058 TCF12Q99081 682 aa16.86■□□□□ 0.29
TOM1-210ENST00000449058 HOPXQ9BPY8 73 aaPredicted RBP16.86■□□□□ 0.29
TOM1-210ENST00000449058 SEMA6AQ9H2E6 1030 aa16.86■□□□□ 0.29
TOM1-210ENST00000449058 UBA6A0AVT1 1052 aaPredicted RBP16.86■□□□□ 0.29
TOM1-210ENST00000449058 OR6B1O95007 311 aa16.86■□□□□ 0.29
TOM1-210ENST00000449058 HSPA8P11142 646 aaKnown RBP16.86■□□□□ 0.29
TOM1-210ENST00000449058 LBPP18428 481 aa16.86■□□□□ 0.29
TOM1-210ENST00000449058 CR2P20023 1033 aa16.86■□□□□ 0.29
TOM1-210ENST00000449058 CAPN3P20807 821 aa16.86■□□□□ 0.29
TOM1-210ENST00000449058 EEF1DP29692 281 aaKnown RBP16.86■□□□□ 0.29
TOM1-210ENST00000449058 SMARCB1Q12824 385 aa16.86■□□□□ 0.29
TOM1-210ENST00000449058 APOFQ13790 326 aa16.86■□□□□ 0.29
TOM1-210ENST00000449058 TAF1AQ15573 450 aaPredicted RBP16.86■□□□□ 0.29
TOM1-210ENST00000449058 HMBOX1Q6NT76 420 aa16.86■□□□□ 0.29
TOM1-210ENST00000449058 PRMT9Q6P2P2 845 aa16.86■□□□□ 0.29
TOM1-210ENST00000449058 DDIASQ8IXT1 998 aa16.86■□□□□ 0.29
TOM1-210ENST00000449058 FBXO39Q8N4B4 442 aa16.86■□□□□ 0.29
TOM1-210ENST00000449058 MINDY1Q8N5J2 469 aa16.86■□□□□ 0.29
TOM1-210ENST00000449058 OR4K2Q8NGD2 314 aa16.86■□□□□ 0.29
TOM1-210ENST00000449058 ZUFSPQ96AP4 578 aa16.86■□□□□ 0.29
TOM1-210ENST00000449058 LRCH3Q96II8 777 aa16.86■□□□□ 0.29
TOM1-210ENST00000449058 TTLL2Q9BWV7 592 aa16.86■□□□□ 0.29
TOM1-210ENST00000449058 GMPR2Q9P2T1 348 aaKnown RBP16.86■□□□□ 0.29
TOM1-210ENST00000449058 UBA2Q9UBT2 640 aaPredicted RBP16.86■□□□□ 0.29
TOM1-210ENST00000449058 POLG2Q9UHN1 485 aa16.86■□□□□ 0.29
TOM1-210ENST00000449058 APPL1Q9UKG1 709 aa16.86■□□□□ 0.29
TOM1-210ENST00000449058 CNOT6Q9ULM6 557 aaKnown RBP16.86■□□□□ 0.29
TOM1-210ENST00000449058 RNF112Q9ULX5 631 aa16.86■□□□□ 0.29
TOM1-210ENST00000449058 OAS3Q9Y6K5 1087 aaKnown RBP16.86■□□□□ 0.29
TOM1-210ENST00000449058 A0A1B0GTL3 188 aa16.85■□□□□ 0.29
TOM1-210ENST00000449058 SLC38A8A6NNN8 435 aa16.85■□□□□ 0.29
TOM1-210ENST00000449058 SUPT3HB4E1H0 165 aa16.85■□□□□ 0.29
TOM1-210ENST00000449058 NME4O00746 187 aa16.85■□□□□ 0.29
TOM1-210ENST00000449058 KDELR3O43731 214 aa16.85■□□□□ 0.29
TOM1-210ENST00000449058 SUPT3HO75486 399 aa16.85■□□□□ 0.29
TOM1-210ENST00000449058 CSPG5O95196 566 aa16.85■□□□□ 0.29
TOM1-210ENST00000449058 PRLP01236 227 aa16.85■□□□□ 0.29
TOM1-210ENST00000449058 RPS17P08708 135 aaKnown RBP16.85■□□□□ 0.29
TOM1-210ENST00000449058 FMO4P31512 558 aa16.85■□□□□ 0.29
TOM1-210ENST00000449058 CDH4P55283 916 aa16.85■□□□□ 0.29
TOM1-210ENST00000449058 DUSP4Q13115 394 aa16.85■□□□□ 0.29
TOM1-210ENST00000449058 GEN1Q17RS7 908 aa16.85■□□□□ 0.29
TOM1-210ENST00000449058 IL31Q6EBC2 164 aa16.85■□□□□ 0.29
TOM1-210ENST00000449058 MDGA1Q8NFP4 955 aa16.85■□□□□ 0.29
TOM1-210ENST00000449058 OR2T34Q8NGX1 318 aa16.85■□□□□ 0.29
TOM1-210ENST00000449058 OR2T3Q8NH03 318 aa16.85■□□□□ 0.29
TOM1-210ENST00000449058 GIPC2Q8TF65 315 aa16.85■□□□□ 0.29
TOM1-210ENST00000449058 ZIC5Q96T25 663 aa16.85■□□□□ 0.29
TOM1-210ENST00000449058 EFHD1Q9BUP0 239 aa16.85■□□□□ 0.29
TOM1-210ENST00000449058 CINPQ9BW66 212 aaPredicted RBP16.85■□□□□ 0.29
TOM1-210ENST00000449058 C1QTNF3Q9BXJ4 246 aa16.85■□□□□ 0.29
TOM1-210ENST00000449058 SLC52A3Q9NQ40 469 aa16.85■□□□□ 0.29
TOM1-210ENST00000449058 ARMC1Q9NVT9 282 aa16.85■□□□□ 0.29
TOM1-210ENST00000449058 ARIH1Q9Y4X5 557 aaPredicted RBP16.85■□□□□ 0.29
TOM1-210ENST00000449058 SNX13Q9Y5W8 968 aa16.85■□□□□ 0.29
TOM1-210ENST00000449058 ZFP37Q9Y6Q3 630 aaPredicted RBP16.85■□□□□ 0.29
TOM1-210ENST00000449058 FXYD1O00168 92 aa16.85■□□□□ 0.29
TOM1-210ENST00000449058 VPS4BO75351 444 aa16.85■□□□□ 0.29
TOM1-210ENST00000449058 ECI2O75521 394 aa16.85■□□□□ 0.29
TOM1-210ENST00000449058 ATP6V1B2P21281 511 aa16.85■□□□□ 0.29
TOM1-210ENST00000449058 NME5P56597 212 aa16.85■□□□□ 0.29
TOM1-210ENST00000449058 TXNL4AP83876 142 aaKnown RBP16.85■□□□□ 0.29
TOM1-210ENST00000449058 RAD51Q06609 339 aa16.85■□□□□ 0.29
TOM1-210ENST00000449058 LSAMPQ13449 338 aa16.85■□□□□ 0.29
TOM1-210ENST00000449058 NRF1Q16656 503 aa16.85■□□□□ 0.29
TOM1-210ENST00000449058 VPS26BQ4G0F5 336 aa16.85■□□□□ 0.29
TOM1-210ENST00000449058 MTX3Q5HYI7 312 aa16.85■□□□□ 0.29
TOM1-210ENST00000449058 PITRM1Q5JRX3 1037 aa16.85■□□□□ 0.29
TOM1-210ENST00000449058 METTL25Q8N6Q8 603 aa16.85■□□□□ 0.29
TOM1-210ENST00000449058 TUBGCP3Q96CW5 907 aa16.85■□□□□ 0.29
TOM1-210ENST00000449058 DGCR14Q96DF8 476 aaKnown RBP16.85■□□□□ 0.29
TOM1-210ENST00000449058 PADI4Q9UM07 663 aa16.85■□□□□ 0.29
TOM1-210ENST00000449058 FAM50BQ9Y247 325 aa16.85■□□□□ 0.29
TOM1-210ENST00000449058 AK5Q9Y6K8 562 aa16.85■□□□□ 0.29
TOM1-210ENST00000449058 INSIG1O15503 277 aa16.84■□□□□ 0.29
TOM1-210ENST00000449058 KLK8O60259 260 aa16.84■□□□□ 0.29
TOM1-210ENST00000449058 LINC00032P0C843 101 aa16.84■□□□□ 0.29
TOM1-210ENST00000449058 HGFP14210 728 aa16.84■□□□□ 0.29
TOM1-210ENST00000449058 ATF6P18850 670 aa16.84■□□□□ 0.29
TOM1-210ENST00000449058 SLC11A1P49279 550 aa16.84■□□□□ 0.29
TOM1-210ENST00000449058 OXCT1P55809 520 aa16.84■□□□□ 0.29
TOM1-210ENST00000449058 TSNQ15631 228 aaKnown RBP16.84■□□□□ 0.29
TOM1-210ENST00000449058 C11orf91Q3C1V1 193 aa16.84■□□□□ 0.29
TOM1-210ENST00000449058 MAP7D1Q3KQU3 841 aa16.84■□□□□ 0.29
TOM1-210ENST00000449058 COQ5Q5HYK3 327 aa16.84■□□□□ 0.29
TOM1-210ENST00000449058 RTP2Q5QGT7 225 aa16.84■□□□□ 0.29
TOM1-210ENST00000449058 OGFOD2Q6N063 350 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms