RNA–Protein interactions for RNA: ENST00000444058.1

ATPAF2-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-201ENST00000444058 LRP8Q14114 963 aa18.72■□□□□ 0.59
ATPAF2-201ENST00000444058 SPIDRQ14159 915 aa18.72■□□□□ 0.59
ATPAF2-201ENST00000444058 HLTFQ14527 1009 aaKnown RBP eCLIP18.72■□□□□ 0.59
ATPAF2-201ENST00000444058 IGF2-ASQ6U949 168 aa18.72■□□□□ 0.59
ATPAF2-201ENST00000444058 B4GALNT4Q76KP1 1039 aa18.72■□□□□ 0.59
ATPAF2-201ENST00000444058 TMC3Q7Z5M5 1100 aa18.72■□□□□ 0.59
ATPAF2-201ENST00000444058 KIAA1328Q86T90 577 aa18.72■□□□□ 0.59
ATPAF2-201ENST00000444058 NRROSQ86YC3 692 aa18.72■□□□□ 0.59
ATPAF2-201ENST00000444058 ACRBPQ8NEB7 543 aa18.72■□□□□ 0.59
ATPAF2-201ENST00000444058 SPATA22Q8NHS9 363 aa18.72■□□□□ 0.59
ATPAF2-201ENST00000444058 SNIP1Q8TAD8 396 aaKnown RBP18.72■□□□□ 0.59
ATPAF2-201ENST00000444058 CCDC74AQ96AQ1 378 aa18.72■□□□□ 0.59
ATPAF2-201ENST00000444058 EID2BQ96D98 161 aa18.72■□□□□ 0.59
ATPAF2-201ENST00000444058 FCRL5Q96RD9 977 aa18.72■□□□□ 0.59
ATPAF2-201ENST00000444058 WDR24Q96S15 920 aa18.72■□□□□ 0.59
ATPAF2-201ENST00000444058 AGAP2Q99490 1192 aa18.72■□□□□ 0.59
ATPAF2-201ENST00000444058 FAM153AQ9UHL3 310 aa18.72■□□□□ 0.59
ATPAF2-201ENST00000444058 URB1O60287 2271 aaKnown RBP18.72■□□□□ 0.59
ATPAF2-201ENST00000444058 RP1P56715 2156 aa18.71■□□□□ 0.59
ATPAF2-201ENST00000444058 LOC285095A0A1B0GVY8 99 aa18.71■□□□□ 0.59
ATPAF2-201ENST00000444058 ADCY8P40145 1251 aa18.71■□□□□ 0.59
ATPAF2-201ENST00000444058 CETN2P41208 172 aa18.71■□□□□ 0.59
ATPAF2-201ENST00000444058 CTBSQ01459 385 aa18.71■□□□□ 0.59
ATPAF2-201ENST00000444058 KIF5AQ12840 1032 aa18.71■□□□□ 0.59
ATPAF2-201ENST00000444058 NOMO1Q15155 1222 aa18.71■□□□□ 0.59
ATPAF2-201ENST00000444058 PCSK7Q16549 785 aa18.71■□□□□ 0.59
ATPAF2-201ENST00000444058 PYCR3Q53H96 274 aa18.71■□□□□ 0.59
ATPAF2-201ENST00000444058 PDPK2PQ6A1A2 396 aa18.71■□□□□ 0.59
ATPAF2-201ENST00000444058 LYSMD3Q7Z3D4 306 aa18.71■□□□□ 0.59
ATPAF2-201ENST00000444058 SYCE1Q8N0S2 351 aa18.71■□□□□ 0.59
ATPAF2-201ENST00000444058 ZNF567Q8N184 647 aa18.71■□□□□ 0.59
ATPAF2-201ENST00000444058 FGF11Q92914 225 aa18.71■□□□□ 0.59
ATPAF2-201ENST00000444058 OR2M4Q96R27 311 aa18.71■□□□□ 0.59
ATPAF2-201ENST00000444058 FERMT1Q9BQL6 677 aa18.71■□□□□ 0.59
ATPAF2-201ENST00000444058 HEMGNQ9BXL5 484 aa18.71■□□□□ 0.59
ATPAF2-201ENST00000444058 OSBPL8Q9BZF1 889 aa18.71■□□□□ 0.59
ATPAF2-201ENST00000444058 RMI1Q9H9A7 625 aa18.71■□□□□ 0.59
ATPAF2-201ENST00000444058 POLR1BQ9H9Y6 1135 aa18.71■□□□□ 0.59
ATPAF2-201ENST00000444058 SPATS2LQ9NUQ6 558 aaKnown RBP18.71■□□□□ 0.59
ATPAF2-201ENST00000444058 TAAR2Q9P1P5 351 aa18.71■□□□□ 0.59
ATPAF2-201ENST00000444058 KLHL8Q9P2G9 620 aaPredicted RBP18.71■□□□□ 0.59
ATPAF2-201ENST00000444058 RABGEF1Q9UJ41 708 aa18.71■□□□□ 0.59
ATPAF2-201ENST00000444058 CNOT6Q9ULM6 557 aaKnown RBP18.71■□□□□ 0.59
ATPAF2-201ENST00000444058 ENTPD2Q9Y5L3 495 aa18.71■□□□□ 0.59
ATPAF2-201ENST00000444058 GRID2IPA4D2P6 1211 aa18.7■□□□□ 0.58
ATPAF2-201ENST00000444058 GOLGA6L6A8MZA4 724 aa18.7■□□□□ 0.58
ATPAF2-201ENST00000444058 TMX2-CTNND1H3BSU7 103 aa18.7■□□□□ 0.58
ATPAF2-201ENST00000444058 BRINP1O60477 761 aa18.7■□□□□ 0.58
ATPAF2-201ENST00000444058 PMPCBO75439 489 aa18.7■□□□□ 0.58
ATPAF2-201ENST00000444058 ZNF189O75820 626 aaPredicted RBP18.7■□□□□ 0.58
ATPAF2-201ENST00000444058 FGF1P05230 155 aa18.7■□□□□ 0.58
ATPAF2-201ENST00000444058 NFKB1P19838 968 aa18.7■□□□□ 0.58
ATPAF2-201ENST00000444058 TBC1D25Q3MII6 688 aa18.7■□□□□ 0.58
ATPAF2-201ENST00000444058 DOK6Q6PKX4 331 aa18.7■□□□□ 0.58
ATPAF2-201ENST00000444058 PID1Q7Z2X4 250 aa18.7■□□□□ 0.58
ATPAF2-201ENST00000444058 KDELC2Q7Z4H8 507 aa18.7■□□□□ 0.58
ATPAF2-201ENST00000444058 PTCD2Q8WV60 388 aaKnown RBP18.7■□□□□ 0.58
ATPAF2-201ENST00000444058 ZNF578Q96N58 590 aaPredicted RBP18.7■□□□□ 0.58
ATPAF2-201ENST00000444058 ZSCAN5AQ9BUG6 496 aa18.7■□□□□ 0.58
ATPAF2-201ENST00000444058 TRABDQ9H4I3 376 aa18.7■□□□□ 0.58
ATPAF2-201ENST00000444058 LRIT1Q9P2V4 623 aa18.7■□□□□ 0.58
ATPAF2-201ENST00000444058 TMEM98Q9Y2Y6 226 aa18.7■□□□□ 0.58
ATPAF2-201ENST00000444058 ZNF711Q9Y462 761 aa18.7■□□□□ 0.58
ATPAF2-201ENST00000444058 PCDHGA8Q9Y5G5 932 aa18.7■□□□□ 0.58
ATPAF2-201ENST00000444058 ZFHX4Q86UP3 3567 aa18.7■□□□□ 0.58
ATPAF2-201ENST00000444058 CFAP47Q6ZTR5 3102 aa18.69■□□□□ 0.58
ATPAF2-201ENST00000444058 FADS2P1A8MWK0 482 aa18.69■□□□□ 0.58
ATPAF2-201ENST00000444058 MIF4GDA9UHW6 222 aaKnown RBP18.69■□□□□ 0.58
ATPAF2-201ENST00000444058 B4DGG1 531 aa18.69■□□□□ 0.58
ATPAF2-201ENST00000444058 GPR89AB7ZAQ6 455 aa18.69■□□□□ 0.58
ATPAF2-201ENST00000444058 TJP3O95049 919 aa18.69■□□□□ 0.58
ATPAF2-201ENST00000444058 GPR89BP0CG08 455 aa18.69■□□□□ 0.58
ATPAF2-201ENST00000444058 HMGCLP35914 325 aa18.69■□□□□ 0.58
ATPAF2-201ENST00000444058 EIF2S3P41091 472 aaKnown RBP18.69■□□□□ 0.58
ATPAF2-201ENST00000444058 MLLT3P42568 568 aaPredicted RBP18.69■□□□□ 0.58
ATPAF2-201ENST00000444058 TNNT3P45378 269 aaPredicted RBP18.69■□□□□ 0.58
ATPAF2-201ENST00000444058 WNT3AP56704 352 aa18.69■□□□□ 0.58
ATPAF2-201ENST00000444058 ERVPABLB-1P60509 514 aa18.69■□□□□ 0.58
ATPAF2-201ENST00000444058 GABREP78334 506 aa18.69■□□□□ 0.58
ATPAF2-201ENST00000444058 MPP3Q13368 585 aa18.69■□□□□ 0.58
ATPAF2-201ENST00000444058 CCDC181Q5TID7 509 aa18.69■□□□□ 0.58
ATPAF2-201ENST00000444058 KDELC1Q6UW63 502 aa18.69■□□□□ 0.58
ATPAF2-201ENST00000444058 ZNF438Q7Z4V0 828 aa18.69■□□□□ 0.58
ATPAF2-201ENST00000444058 GALNT13Q8IUC8 556 aa18.69■□□□□ 0.58
ATPAF2-201ENST00000444058 ACTL9Q8TC94 416 aa18.69■□□□□ 0.58
ATPAF2-201ENST00000444058 DTX3LQ8TDB6 740 aa18.69■□□□□ 0.58
ATPAF2-201ENST00000444058 ZDHHC1Q8WTX9 485 aa18.69■□□□□ 0.58
ATPAF2-201ENST00000444058 UBE2Q2Q8WVN8 375 aa18.69■□□□□ 0.58
ATPAF2-201ENST00000444058 ALG3Q92685 438 aa18.69■□□□□ 0.58
ATPAF2-201ENST00000444058 HAUS1Q96CS2 278 aa18.69■□□□□ 0.58
ATPAF2-201ENST00000444058 GFM1Q96RP9 751 aaKnown RBP18.69■□□□□ 0.58
ATPAF2-201ENST00000444058 GPR63Q9BZJ6 419 aa18.69■□□□□ 0.58
ATPAF2-201ENST00000444058 LRRN3Q9H3W5 708 aa18.69■□□□□ 0.58
ATPAF2-201ENST00000444058 AMFRQ9UKV5 643 aa18.69■□□□□ 0.58
ATPAF2-201ENST00000444058 SHOC2Q9UQ13 582 aa18.69■□□□□ 0.58
ATPAF2-201ENST00000444058 ST14Q9Y5Y6 855 aa18.69■□□□□ 0.58
ATPAF2-201ENST00000444058 COL27A1Q8IZC6 1860 aaPredicted RBP18.69■□□□□ 0.58
ATPAF2-201ENST00000444058 FAM208BQ5VWN6 2430 aa18.69■□□□□ 0.58
ATPAF2-201ENST00000444058 A0A1W2PQM1 296 aa18.68■□□□□ 0.58
ATPAF2-201ENST00000444058 D6RAR5 112 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms