RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 ITIH5Q86UX2 942 aa12.32□□□□□ -0.44
CLCN4-203ENST00000421085 TSSK3Q96PN8 268 aa12.32□□□□□ -0.44
CLCN4-203ENST00000421085 TRIT1Q9H3H1 467 aaKnown RBP12.32□□□□□ -0.44
CLCN4-203ENST00000421085 ZNF490Q9ULM2 529 aaPredicted RBP12.32□□□□□ -0.44
CLCN4-203ENST00000421085 HOXA2O43364 376 aa12.32□□□□□ -0.44
CLCN4-203ENST00000421085 ZNF24P17028 368 aa12.32□□□□□ -0.44
CLCN4-203ENST00000421085 OR2B6P58173 313 aa12.32□□□□□ -0.44
CLCN4-203ENST00000421085 E2F2Q14209 437 aa12.32□□□□□ -0.44
CLCN4-203ENST00000421085 FBXO42Q6P3S6 717 aa12.32□□□□□ -0.44
CLCN4-203ENST00000421085 TRPV3Q8NET8 790 aa12.32□□□□□ -0.44
CLCN4-203ENST00000421085 KBTBD7Q8WVZ9 684 aa12.32□□□□□ -0.44
CLCN4-203ENST00000421085 NXF3Q9H4D5 531 aaKnown RBP12.32□□□□□ -0.44
CLCN4-203ENST00000421085 ELL3Q9HB65 397 aaPredicted RBP12.32□□□□□ -0.44
CLCN4-203ENST00000421085 NKX1-2Q9UD57 310 aaPredicted RBP12.32□□□□□ -0.44
CLCN4-203ENST00000421085 RAB23Q9ULC3 237 aa12.32□□□□□ -0.44
CLCN4-203ENST00000421085 A0A0X1KG70 313 aa12.31□□□□□ -0.44
CLCN4-203ENST00000421085 COL6A2P12110 1019 aa12.31□□□□□ -0.44
CLCN4-203ENST00000421085 SGCGQ13326 291 aa12.31□□□□□ -0.44
CLCN4-203ENST00000421085 SMCO1Q147U7 214 aa12.31□□□□□ -0.44
CLCN4-203ENST00000421085 SWI5Q1ZZU3 235 aa12.31□□□□□ -0.44
CLCN4-203ENST00000421085 C6orf183Q5T699 404 aa12.31□□□□□ -0.44
CLCN4-203ENST00000421085 PAOXQ6QHF9 649 aa12.31□□□□□ -0.44
CLCN4-203ENST00000421085 C10orf82Q8WW14 230 aa12.31□□□□□ -0.44
CLCN4-203ENST00000421085 SPATC1LQ9H0A9 340 aa12.31□□□□□ -0.44
CLCN4-203ENST00000421085 C12orf4Q9NQ89 552 aa12.31□□□□□ -0.44
CLCN4-203ENST00000421085 A0A088AWK7 358 aa12.31□□□□□ -0.44
CLCN4-203ENST00000421085 C5orf60A6NFR6 353 aa12.31□□□□□ -0.44
CLCN4-203ENST00000421085 TNFRSF11BO00300 401 aa12.31□□□□□ -0.44
CLCN4-203ENST00000421085 TBX10O75333 385 aa12.31□□□□□ -0.44
CLCN4-203ENST00000421085 ZNF10P21506 573 aaPredicted RBP12.31□□□□□ -0.44
CLCN4-203ENST00000421085 FOXN2P32314 431 aa12.31□□□□□ -0.44
CLCN4-203ENST00000421085 ICAM3P32942 547 aa12.31□□□□□ -0.44
CLCN4-203ENST00000421085 TDRPQ86YL5 185 aa12.31□□□□□ -0.44
CLCN4-203ENST00000421085 DAW1Q8N136 415 aa12.31□□□□□ -0.44
CLCN4-203ENST00000421085 CLIP4Q8N3C7 705 aa12.31□□□□□ -0.44
CLCN4-203ENST00000421085 MAB21L3Q8N8X9 362 aa12.31□□□□□ -0.44
CLCN4-203ENST00000421085 CCDC115Q96NT0 180 aa12.31□□□□□ -0.44
CLCN4-203ENST00000421085 TNKS2Q9H2K2 1166 aa12.31□□□□□ -0.44
CLCN4-203ENST00000421085 DDX4Q9NQI0 724 aaKnown RBP12.31□□□□□ -0.44
CLCN4-203ENST00000421085 ZNF99A8MXY4 864 aaPredicted RBP12.31□□□□□ -0.44
CLCN4-203ENST00000421085 MEIS2O14770 477 aa12.31□□□□□ -0.44
CLCN4-203ENST00000421085 MTA2O94776 668 aa12.31□□□□□ -0.44
CLCN4-203ENST00000421085 CXCR2P25025 360 aa12.31□□□□□ -0.44
CLCN4-203ENST00000421085 ABRQ12979 859 aa12.31□□□□□ -0.44
CLCN4-203ENST00000421085 FAM98AQ8NCA5 519 aaKnown RBP12.31□□□□□ -0.44
CLCN4-203ENST00000421085 HELQQ8TDG4 1101 aa12.31□□□□□ -0.44
CLCN4-203ENST00000421085 PPCDCQ96CD2 204 aa12.31□□□□□ -0.44
CLCN4-203ENST00000421085 KAT8Q9H7Z6 458 aaKnown RBP12.31□□□□□ -0.44
CLCN4-203ENST00000421085 KPNA3O00505 521 aaPredicted RBP12.31□□□□□ -0.44
CLCN4-203ENST00000421085 CHST10O43529 356 aa12.31□□□□□ -0.44
CLCN4-203ENST00000421085 UGT1A9O60656 530 aa12.31□□□□□ -0.44
CLCN4-203ENST00000421085 SPATA31C1P0DKV0 1188 aa12.31□□□□□ -0.44
CLCN4-203ENST00000421085 ATF6P18850 670 aa12.31□□□□□ -0.44
CLCN4-203ENST00000421085 UGT1A6P19224 532 aa12.31□□□□□ -0.44
CLCN4-203ENST00000421085 UGT1A1P22309 533 aa12.31□□□□□ -0.44
CLCN4-203ENST00000421085 UGT1A4P22310 534 aa12.31□□□□□ -0.44
CLCN4-203ENST00000421085 UGT1A3P35503 534 aa12.31□□□□□ -0.44
CLCN4-203ENST00000421085 UGT1A5P35504 534 aa12.31□□□□□ -0.44
CLCN4-203ENST00000421085 TMEM214Q6NUQ4 689 aaKnown RBP12.31□□□□□ -0.44
CLCN4-203ENST00000421085 OR52J3Q8NH60 311 aa12.31□□□□□ -0.44
CLCN4-203ENST00000421085 MRPL45Q9BRJ2 306 aaKnown RBP12.31□□□□□ -0.44
CLCN4-203ENST00000421085 IKZF4Q9H2S9 585 aa12.31□□□□□ -0.44
CLCN4-203ENST00000421085 UGT1A7Q9HAW7 530 aa12.31□□□□□ -0.44
CLCN4-203ENST00000421085 UGT1A10Q9HAW8 530 aa12.31□□□□□ -0.44
CLCN4-203ENST00000421085 UGT1A8Q9HAW9 530 aa12.31□□□□□ -0.44
CLCN4-203ENST00000421085 PCDHGC3Q9UN70 934 aa12.31□□□□□ -0.44
CLCN4-203ENST00000421085 BAZ2BQ9UIF8 2168 aaKnown RBP12.31□□□□□ -0.44
CLCN4-203ENST00000421085 TARBP1Q13395 1621 aaKnown RBP12.31□□□□□ -0.44
CLCN4-203ENST00000421085 SLC30A4O14863 429 aa12.31□□□□□ -0.44
CLCN4-203ENST00000421085 MC4RP32245 332 aa12.31□□□□□ -0.44
CLCN4-203ENST00000421085 MATKP42679 507 aa12.31□□□□□ -0.44
CLCN4-203ENST00000421085 RAB15P59190 212 aa12.31□□□□□ -0.44
CLCN4-203ENST00000421085 SNAPC1Q16533 368 aa12.31□□□□□ -0.44
CLCN4-203ENST00000421085 ARSHQ5FYA8 562 aa12.31□□□□□ -0.44
CLCN4-203ENST00000421085 TAPT1Q6NXT6 567 aa12.31□□□□□ -0.44
CLCN4-203ENST00000421085 FAM171BQ6P995 826 aa12.31□□□□□ -0.44
CLCN4-203ENST00000421085 PIGKQ92643 395 aa12.31□□□□□ -0.44
CLCN4-203ENST00000421085 FGFBP2Q9BYJ0 223 aa12.31□□□□□ -0.44
CLCN4-203ENST00000421085 BHLHE41Q9C0J9 482 aaPredicted RBP12.31□□□□□ -0.44
CLCN4-203ENST00000421085 CNOT6Q9ULM6 557 aaKnown RBP12.31□□□□□ -0.44
CLCN4-203ENST00000421085 PRELID1Q9Y255 219 aa12.31□□□□□ -0.44
CLCN4-203ENST00000421085 GIT1Q9Y2X7 761 aa12.31□□□□□ -0.44
CLCN4-203ENST00000421085 PPP2R3BQ9Y5P8 575 aa12.31□□□□□ -0.44
CLCN4-203ENST00000421085 LPOP22079 712 aaPredicted RBP12.3□□□□□ -0.44
CLCN4-203ENST00000421085 TLX1P31314 330 aaPredicted RBP12.3□□□□□ -0.44
CLCN4-203ENST00000421085 RAB27AP51159 221 aa12.3□□□□□ -0.44
CLCN4-203ENST00000421085 WNT3AP56704 352 aa12.3□□□□□ -0.44
CLCN4-203ENST00000421085 PITRM1Q5JRX3 1037 aa12.3□□□□□ -0.44
CLCN4-203ENST00000421085 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.3□□□□□ -0.44
CLCN4-203ENST00000421085 CPTPQ5TA50 214 aa12.3□□□□□ -0.44
CLCN4-203ENST00000421085 TMCO6Q96DC7 493 aa12.3□□□□□ -0.44
CLCN4-203ENST00000421085 FAM84AQ96KN4 292 aa12.3□□□□□ -0.44
CLCN4-203ENST00000421085 GJD4Q96KN9 370 aaPredicted RBP12.3□□□□□ -0.44
CLCN4-203ENST00000421085 WDR37Q9Y2I8 494 aa12.3□□□□□ -0.44
CLCN4-203ENST00000421085 CEP152O94986 1710 aa12.3□□□□□ -0.44
CLCN4-203ENST00000421085 TULP3O75386 442 aa12.3□□□□□ -0.44
CLCN4-203ENST00000421085 ELAVL2Q12926 359 aaKnown RBP12.3□□□□□ -0.44
CLCN4-203ENST00000421085 ZNHIT3Q15649 155 aaPredicted RBP12.3□□□□□ -0.44
CLCN4-203ENST00000421085 ACO2Q99798 780 aaKnown RBP12.3□□□□□ -0.44
CLCN4-203ENST00000421085 KANSL3Q9P2N6 904 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms