RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 MUC3BQ9H195 1237 aa11.85□□□□□ -0.51
LIMK1-202ENST00000418310 MFSD1Q9H3U5 465 aa11.85□□□□□ -0.51
LIMK1-202ENST00000418310 OLAHQ9NV23 265 aa11.85□□□□□ -0.51
LIMK1-202ENST00000418310 THEGQ9P2T0 379 aa11.85□□□□□ -0.51
LIMK1-202ENST00000418310 EBF1Q9UH73 591 aa11.85□□□□□ -0.51
LIMK1-202ENST00000418310 SPO11Q9Y5K1 396 aa11.85□□□□□ -0.51
LIMK1-202ENST00000418310 CEPT1Q9Y6K0 416 aa11.85□□□□□ -0.51
LIMK1-202ENST00000418310 SLC7A4O43246 635 aa11.85□□□□□ -0.51
LIMK1-202ENST00000418310 IRF1P10914 325 aa11.85□□□□□ -0.51
LIMK1-202ENST00000418310 MTHFD2P13995 350 aa11.85□□□□□ -0.51
LIMK1-202ENST00000418310 CLCQ05315 142 aa11.85□□□□□ -0.51
LIMK1-202ENST00000418310 PTPRNQ16849 979 aa11.85□□□□□ -0.51
LIMK1-202ENST00000418310 UGT3A2Q3SY77 523 aa11.85□□□□□ -0.51
LIMK1-202ENST00000418310 PAGE3Q5JUK9 113 aa11.85□□□□□ -0.51
LIMK1-202ENST00000418310 MRNIPQ6NTE8 343 aa11.85□□□□□ -0.51
LIMK1-202ENST00000418310 LCA5Q86VQ0 697 aa11.85□□□□□ -0.51
LIMK1-202ENST00000418310 EPHX4Q8IUS5 362 aa11.85□□□□□ -0.51
LIMK1-202ENST00000418310 CMTR2Q8IYT2 770 aaKnown RBP11.85□□□□□ -0.51
LIMK1-202ENST00000418310 SIDT2Q8NBJ9 832 aaKnown RBP11.85□□□□□ -0.51
LIMK1-202ENST00000418310 LPCAT1Q8NF37 534 aa11.85□□□□□ -0.51
LIMK1-202ENST00000418310 OR4L1Q8NH43 312 aa11.85□□□□□ -0.51
LIMK1-202ENST00000418310 ZNF597Q96LX8 424 aa11.85□□□□□ -0.51
LIMK1-202ENST00000418310 PKMYT1Q99640 499 aa11.85□□□□□ -0.51
LIMK1-202ENST00000418310 OSBPL11Q9BXB4 747 aa11.85□□□□□ -0.51
LIMK1-202ENST00000418310 INTS7Q9NVH2 962 aaKnown RBP11.85□□□□□ -0.51
LIMK1-202ENST00000418310 DUS2Q9NX74 493 aaKnown RBP11.85□□□□□ -0.51
LIMK1-202ENST00000418310 GALNT8Q9NY28 637 aa11.85□□□□□ -0.51
LIMK1-202ENST00000418310 CDC14AQ9UNH5 594 aa11.85□□□□□ -0.51
LIMK1-202ENST00000418310 TCRBV3S1A0A5B6 114 aa11.84□□□□□ -0.51
LIMK1-202ENST00000418310 ARPC2O15144 300 aa11.84□□□□□ -0.51
LIMK1-202ENST00000418310 NDUFS3O75489 264 aa11.84□□□□□ -0.51
LIMK1-202ENST00000418310 BMP1P13497 986 aa11.84□□□□□ -0.51
LIMK1-202ENST00000418310 RPS24P62847 133 aaKnown RBP11.84□□□□□ -0.51
LIMK1-202ENST00000418310 APOFQ13790 326 aa11.84□□□□□ -0.51
LIMK1-202ENST00000418310 LPIN1Q14693 890 aa11.84□□□□□ -0.51
LIMK1-202ENST00000418310 NEDD8Q15843 81 aa11.84□□□□□ -0.51
LIMK1-202ENST00000418310 ARTNQ5T4W7 220 aa11.84□□□□□ -0.51
LIMK1-202ENST00000418310 LINGO4Q6UY18 593 aa11.84□□□□□ -0.51
LIMK1-202ENST00000418310 C16orf59Q7L2K0 433 aa11.84□□□□□ -0.51
LIMK1-202ENST00000418310 HSPBAP1Q96EW2 488 aa11.84□□□□□ -0.51
LIMK1-202ENST00000418310 PPM1MQ96MI6 270 aa11.84□□□□□ -0.51
LIMK1-202ENST00000418310 TCF12Q99081 682 aa11.84□□□□□ -0.51
LIMK1-202ENST00000418310 ZBED2Q9BTP6 218 aa11.84□□□□□ -0.51
LIMK1-202ENST00000418310 SLC2A11Q9BYW1 496 aa11.84□□□□□ -0.51
LIMK1-202ENST00000418310 POLR1EQ9GZS1 481 aaKnown RBP11.84□□□□□ -0.51
LIMK1-202ENST00000418310 NDUFA13Q9P0J0 144 aa11.84□□□□□ -0.51
LIMK1-202ENST00000418310 HSFX1Q9UBD0 423 aa11.84□□□□□ -0.51
LIMK1-202ENST00000418310 RSL24D1Q9UHA3 163 aaKnown RBP11.84□□□□□ -0.51
LIMK1-202ENST00000418310 EIF2B4Q9UI10 523 aaKnown RBP11.84□□□□□ -0.51
LIMK1-202ENST00000418310 MAGED1Q9Y5V3 778 aaPredicted RBP11.84□□□□□ -0.51
LIMK1-202ENST00000418310 GLTPD2A6NH11 291 aa11.84□□□□□ -0.51
LIMK1-202ENST00000418310 ECI2O75521 394 aa11.84□□□□□ -0.51
LIMK1-202ENST00000418310 ASGR1P07306 291 aa11.84□□□□□ -0.51
LIMK1-202ENST00000418310 PIM1P11309 404 aaPredicted RBP11.84□□□□□ -0.51
LIMK1-202ENST00000418310 ZNF23P17027 643 aa11.84□□□□□ -0.51
LIMK1-202ENST00000418310 RHOQP17081 205 aa11.84□□□□□ -0.51
LIMK1-202ENST00000418310 PSMA4P25789 261 aaKnown RBP11.84□□□□□ -0.51
LIMK1-202ENST00000418310 HOXC13P31276 330 aa11.84□□□□□ -0.51
LIMK1-202ENST00000418310 GATMP50440 423 aa11.84□□□□□ -0.51
LIMK1-202ENST00000418310 TIAL1Q01085 375 aaKnown RBP eCLIP11.84□□□□□ -0.51
LIMK1-202ENST00000418310 MAPRE1Q15691 268 aaKnown RBP11.84□□□□□ -0.51
LIMK1-202ENST00000418310 GPR162Q16538 588 aa11.84□□□□□ -0.51
LIMK1-202ENST00000418310 CTXN3Q4LDR2 81 aa11.84□□□□□ -0.51
LIMK1-202ENST00000418310 ZRANB3Q5FWF4 1079 aa11.84□□□□□ -0.51
LIMK1-202ENST00000418310 MON1AQ86VX9 555 aa11.84□□□□□ -0.51
LIMK1-202ENST00000418310 MRM3Q9HC36 420 aaKnown RBP11.84□□□□□ -0.51
LIMK1-202ENST00000418310 ATXN10Q9UBB4 475 aa11.84□□□□□ -0.51
LIMK1-202ENST00000418310 MIA3Q5JRA6 1907 aa11.84□□□□□ -0.51
LIMK1-202ENST00000418310 A0A0U1RQF3 1178 aa11.84□□□□□ -0.51
LIMK1-202ENST00000418310 A8MX80 341 aa11.84□□□□□ -0.51
LIMK1-202ENST00000418310 FXYD1O00168 92 aa11.84□□□□□ -0.51
LIMK1-202ENST00000418310 B4GAT1O43505 415 aa11.84□□□□□ -0.51
LIMK1-202ENST00000418310 CDK4P11802 303 aa11.84□□□□□ -0.51
LIMK1-202ENST00000418310 LBPP18428 481 aa11.84□□□□□ -0.51
LIMK1-202ENST00000418310 IL10P22301 178 aa11.84□□□□□ -0.51
LIMK1-202ENST00000418310 SLC6A2P23975 617 aa11.84□□□□□ -0.51
LIMK1-202ENST00000418310 EEF1B2P24534 225 aaKnown RBP11.84□□□□□ -0.51
LIMK1-202ENST00000418310 ZNF157P51786 506 aaPredicted RBP11.84□□□□□ -0.51
LIMK1-202ENST00000418310 EIF4EBP2Q13542 120 aaPredicted RBP11.84□□□□□ -0.51
LIMK1-202ENST00000418310 TMEM259Q4ZIN3 620 aa11.84□□□□□ -0.51
LIMK1-202ENST00000418310 FAM171A1Q5VUB5 890 aa11.84□□□□□ -0.51
LIMK1-202ENST00000418310 TMEM214Q6NUQ4 689 aaKnown RBP11.84□□□□□ -0.51
LIMK1-202ENST00000418310 GLT6D1Q7Z4J2 308 aa11.84□□□□□ -0.51
LIMK1-202ENST00000418310 LRRC58Q96CX6 371 aa11.84□□□□□ -0.51
LIMK1-202ENST00000418310 RNF145Q96MT1 663 aa11.84□□□□□ -0.51
LIMK1-202ENST00000418310 HAUS8Q9BT25 410 aa11.84□□□□□ -0.51
LIMK1-202ENST00000418310 CD274Q9NZQ7 290 aa11.84□□□□□ -0.51
LIMK1-202ENST00000418310 TLR6Q9Y2C9 796 aa11.84□□□□□ -0.51
LIMK1-202ENST00000418310 CBX4O00257 560 aa11.83□□□□□ -0.52
LIMK1-202ENST00000418310 GIPC1O14908 333 aa11.83□□□□□ -0.52
LIMK1-202ENST00000418310 ZNF189O75820 626 aaPredicted RBP11.83□□□□□ -0.52
LIMK1-202ENST00000418310 TMCC1O94876 653 aa11.83□□□□□ -0.52
LIMK1-202ENST00000418310 OR4F21O95013 312 aa11.83□□□□□ -0.52
LIMK1-202ENST00000418310 GUCA1CO95843 209 aa11.83□□□□□ -0.52
LIMK1-202ENST00000418310 KCNK10P57789 538 aa11.83□□□□□ -0.52
LIMK1-202ENST00000418310 ZNF33AQ06730 810 aa11.83□□□□□ -0.52
LIMK1-202ENST00000418310 MSANTD2Q6P1R3 559 aa11.83□□□□□ -0.52
LIMK1-202ENST00000418310 SLC2A7Q6PXP3 512 aa11.83□□□□□ -0.52
LIMK1-202ENST00000418310 TAS2R42Q7RTR8 314 aa11.83□□□□□ -0.52
LIMK1-202ENST00000418310 ZNF598Q86UK7 904 aaKnown RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms