RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 GPR20Q99678 358 aa14.68□□□□□ -0.06
NCKIPSD-204ENST00000416649 GPR22Q99680 433 aa14.68□□□□□ -0.06
NCKIPSD-204ENST00000416649 KCTD14Q9BQ13 255 aaPredicted RBP14.68□□□□□ -0.06
NCKIPSD-204ENST00000416649 CENPOQ9BU64 300 aa14.68□□□□□ -0.06
NCKIPSD-204ENST00000416649 ANKRD6Q9Y2G4 727 aa14.68□□□□□ -0.06
NCKIPSD-204ENST00000416649 DYRK3O43781 588 aa14.67□□□□□ -0.06
NCKIPSD-204ENST00000416649 KPNA6O60684 536 aa14.67□□□□□ -0.06
NCKIPSD-204ENST00000416649 CILPO75339 1184 aa14.67□□□□□ -0.06
NCKIPSD-204ENST00000416649 PIGRP01833 764 aa14.67□□□□□ -0.06
NCKIPSD-204ENST00000416649 AHSGP02765 367 aa14.67□□□□□ -0.06
NCKIPSD-204ENST00000416649 HTR1AP08908 422 aa14.67□□□□□ -0.06
NCKIPSD-204ENST00000416649 THRBP10828 461 aa14.67□□□□□ -0.06
NCKIPSD-204ENST00000416649 TCF3P15923 654 aa14.67□□□□□ -0.06
NCKIPSD-204ENST00000416649 SPNP16150 400 aa14.67□□□□□ -0.06
NCKIPSD-204ENST00000416649 ARCN1P48444 511 aaKnown RBP14.67□□□□□ -0.06
NCKIPSD-204ENST00000416649 RABGGTBP53611 331 aa14.67□□□□□ -0.06
NCKIPSD-204ENST00000416649 BCAT1P54687 386 aa14.67□□□□□ -0.06
NCKIPSD-204ENST00000416649 ARSFP54793 590 aa14.67□□□□□ -0.06
NCKIPSD-204ENST00000416649 SLC12A2P55011 1212 aa14.67□□□□□ -0.06
NCKIPSD-204ENST00000416649 DPY19L1Q2PZI1 675 aa14.67□□□□□ -0.06
NCKIPSD-204ENST00000416649 JADE1Q6IE81 842 aa14.67□□□□□ -0.06
NCKIPSD-204ENST00000416649 LCN8Q6JVE9 175 aa14.67□□□□□ -0.06
NCKIPSD-204ENST00000416649 TMEM135Q86UB9 458 aa14.67□□□□□ -0.06
NCKIPSD-204ENST00000416649 DOCK3Q8IZD9 2030 aa14.67□□□□□ -0.06
NCKIPSD-204ENST00000416649 GPRC5AQ8NFJ5 357 aa14.67□□□□□ -0.06
NCKIPSD-204ENST00000416649 HEXDCQ8WVB3 486 aa14.67□□□□□ -0.06
NCKIPSD-204ENST00000416649 TXNDC15Q96J42 360 aa14.67□□□□□ -0.06
NCKIPSD-204ENST00000416649 WDR90Q96KV7 1748 aa14.67□□□□□ -0.06
NCKIPSD-204ENST00000416649 TMEM74Q96NL1 305 aa14.67□□□□□ -0.06
NCKIPSD-204ENST00000416649 BDH2Q9BUT1 245 aa14.67□□□□□ -0.06
NCKIPSD-204ENST00000416649 TRIM39Q9HCM9 518 aa14.67□□□□□ -0.06
NCKIPSD-204ENST00000416649 EVLQ9UI08 416 aaPredicted RBP14.67□□□□□ -0.06
NCKIPSD-204ENST00000416649 CPA4Q9UI42 421 aa14.67□□□□□ -0.06
NCKIPSD-204ENST00000416649 PCDHGA11Q9Y5H2 935 aa14.67□□□□□ -0.06
NCKIPSD-204ENST00000416649 A8MV72 311 aaPredicted RBP14.67□□□□□ -0.06
NCKIPSD-204ENST00000416649 HOXC11O43248 304 aaPredicted RBP14.67□□□□□ -0.06
NCKIPSD-204ENST00000416649 TOMM70O94826 608 aa14.67□□□□□ -0.06
NCKIPSD-204ENST00000416649 KCNK2O95069 426 aa14.67□□□□□ -0.06
NCKIPSD-204ENST00000416649 GPIP06744 558 aa14.67□□□□□ -0.06
NCKIPSD-204ENST00000416649 NFICP08651 508 aa14.67□□□□□ -0.06
NCKIPSD-204ENST00000416649 ALDOCP09972 364 aaKnown RBP14.67□□□□□ -0.06
NCKIPSD-204ENST00000416649 VDRP11473 427 aa14.67□□□□□ -0.06
NCKIPSD-204ENST00000416649 SLC6A2P23975 617 aa14.67□□□□□ -0.06
NCKIPSD-204ENST00000416649 EDNRBP24530 442 aa14.67□□□□□ -0.06
NCKIPSD-204ENST00000416649 ALDH7A1P49419 539 aaKnown RBP14.67□□□□□ -0.06
NCKIPSD-204ENST00000416649 GP2P55259 537 aaKnown RBP14.67□□□□□ -0.06
NCKIPSD-204ENST00000416649 BNIP2Q12982 314 aa14.67□□□□□ -0.06
NCKIPSD-204ENST00000416649 ACAP2Q15057 778 aa14.67□□□□□ -0.06
NCKIPSD-204ENST00000416649 AASDHQ4L235 1098 aaPredicted RBP14.67□□□□□ -0.06
NCKIPSD-204ENST00000416649 WDR45BQ5MNZ6 344 aa14.67□□□□□ -0.06
NCKIPSD-204ENST00000416649 IQCF2Q8IXL9 164 aa14.67□□□□□ -0.06
NCKIPSD-204ENST00000416649 ATL1Q8WXF7 558 aa14.67□□□□□ -0.06
NCKIPSD-204ENST00000416649 ROPN1LQ96C74 230 aa14.67□□□□□ -0.06
NCKIPSD-204ENST00000416649 ZFYVE19Q96K21 471 aa14.67□□□□□ -0.06
NCKIPSD-204ENST00000416649 C3orf30Q96M34 536 aa14.67□□□□□ -0.06
NCKIPSD-204ENST00000416649 EMILIN2Q9BXX0 1053 aa14.67□□□□□ -0.06
NCKIPSD-204ENST00000416649 MRPL4Q9BYD3 311 aaKnown RBP14.67□□□□□ -0.06
NCKIPSD-204ENST00000416649 TOR3AQ9H497 397 aa14.67□□□□□ -0.06
NCKIPSD-204ENST00000416649 SMURF2Q9HAU4 748 aa14.67□□□□□ -0.06
NCKIPSD-204ENST00000416649 GMIPQ9P107 970 aa14.67□□□□□ -0.06
NCKIPSD-204ENST00000416649 NDUFAF1Q9Y375 327 aa14.67□□□□□ -0.06
NCKIPSD-204ENST00000416649 H3BMM5 538 aa14.66□□□□□ -0.06
NCKIPSD-204ENST00000416649 XPNPEP2O43895 674 aa14.66□□□□□ -0.06
NCKIPSD-204ENST00000416649 NPHS1O60500 1241 aa14.66□□□□□ -0.06
NCKIPSD-204ENST00000416649 SUPT7LO94864 414 aa14.66□□□□□ -0.06
NCKIPSD-204ENST00000416649 SLC25A27O95847 323 aa14.66□□□□□ -0.06
NCKIPSD-204ENST00000416649 C7P10643 843 aa14.66□□□□□ -0.06
NCKIPSD-204ENST00000416649 PSMB9P28065 219 aa14.66□□□□□ -0.06
NCKIPSD-204ENST00000416649 GTF2E2P29084 291 aaKnown RBP14.66□□□□□ -0.06
NCKIPSD-204ENST00000416649 ICAM3P32942 547 aa14.66□□□□□ -0.06
NCKIPSD-204ENST00000416649 CASP3P42574 277 aa14.66□□□□□ -0.06
NCKIPSD-204ENST00000416649 GSK3BP49841 420 aa14.66□□□□□ -0.06
NCKIPSD-204ENST00000416649 CDH13P55290 713 aa14.66□□□□□ -0.06
NCKIPSD-204ENST00000416649 DPYSL2Q16555 572 aa14.66□□□□□ -0.06
NCKIPSD-204ENST00000416649 COLEC12Q5KU26 742 aa14.66□□□□□ -0.06
NCKIPSD-204ENST00000416649 CELF3Q5SZQ8 465 aaKnown RBP14.66□□□□□ -0.06
NCKIPSD-204ENST00000416649 FAM160B1Q5W0V3 765 aa14.66□□□□□ -0.06
NCKIPSD-204ENST00000416649 DESI1Q6ICB0 168 aa14.66□□□□□ -0.06
NCKIPSD-204ENST00000416649 SPATC1Q76KD6 591 aa14.66□□□□□ -0.06
NCKIPSD-204ENST00000416649 C11orf74Q86VG3 221 aa14.66□□□□□ -0.06
NCKIPSD-204ENST00000416649 RALGPS2Q86X27 583 aaPredicted RBP14.66□□□□□ -0.06
NCKIPSD-204ENST00000416649 TBC1D21Q8IYX1 336 aa14.66□□□□□ -0.06
NCKIPSD-204ENST00000416649 DEPDC4Q8N2C3 294 aa14.66□□□□□ -0.06
NCKIPSD-204ENST00000416649 C7orf31Q8N865 590 aa14.66□□□□□ -0.06
NCKIPSD-204ENST00000416649 OR6Q1Q8NGQ2 317 aa14.66□□□□□ -0.06
NCKIPSD-204ENST00000416649 TRIB2Q92519 343 aa14.66□□□□□ -0.06
NCKIPSD-204ENST00000416649 DMRTB1Q96MA1 342 aa14.66□□□□□ -0.06
NCKIPSD-204ENST00000416649 NODALQ96S42 347 aa14.66□□□□□ -0.06
NCKIPSD-204ENST00000416649 RHOBTB2Q9BYZ6 727 aa14.66□□□□□ -0.06
NCKIPSD-204ENST00000416649 RHOJQ9H4E5 214 aa14.66□□□□□ -0.06
NCKIPSD-204ENST00000416649 ALG2Q9H553 416 aa14.66□□□□□ -0.06
NCKIPSD-204ENST00000416649 MEAF6Q9HAF1 191 aa14.66□□□□□ -0.06
NCKIPSD-204ENST00000416649 GBA2Q9HCG7 927 aaPredicted RBP14.66□□□□□ -0.06
NCKIPSD-204ENST00000416649 MAGEE1Q9HCI5 957 aa14.66□□□□□ -0.06
NCKIPSD-204ENST00000416649 NMRK2Q9NPI5 230 aa14.66□□□□□ -0.06
NCKIPSD-204ENST00000416649 SIX4Q9UIU6 781 aa14.66□□□□□ -0.06
NCKIPSD-204ENST00000416649 TESMINQ9Y4I5 508 aa14.66□□□□□ -0.06
NCKIPSD-204ENST00000416649 MKI67P46013 3256 aaKnown RBP14.66□□□□□ -0.06
NCKIPSD-204ENST00000416649 FAM95CA0A1B0GW59 222 aa14.66□□□□□ -0.06
NCKIPSD-204ENST00000416649 TARM1B6A8C7 271 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms