RNA–Protein interactions for RNA: ENST00000412274.6

DDR1-230, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 496 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-230ENST00000412274 HMGCLP35914 325 aa16.11■□□□□ 0.17
DDR1-230ENST00000412274 TARDBPQ13148 414 aaKnown RBP eCLIP16.11■□□□□ 0.17
DDR1-230ENST00000412274 PTPRRQ15256 657 aa16.11■□□□□ 0.17
DDR1-230ENST00000412274 CDCP2Q5VXM1 449 aa16.11■□□□□ 0.17
DDR1-230ENST00000412274 KDELC1Q6UW63 502 aa16.11■□□□□ 0.17
DDR1-230ENST00000412274 EFL1Q7Z2Z2 1120 aaKnown RBP16.11■□□□□ 0.17
DDR1-230ENST00000412274 LYSMD3Q7Z3D4 306 aa16.11■□□□□ 0.17
DDR1-230ENST00000412274 KDELC2Q7Z4H8 507 aa16.11■□□□□ 0.17
DDR1-230ENST00000412274 TRAM1L1Q8N609 369 aa16.11■□□□□ 0.17
DDR1-230ENST00000412274 FAM46DQ8NEK8 389 aa16.11■□□□□ 0.17
DDR1-230ENST00000412274 GPR156Q8NFN8 814 aa16.11■□□□□ 0.17
DDR1-230ENST00000412274 ZCCHC14Q8WYQ9 949 aaKnown RBP16.11■□□□□ 0.17
DDR1-230ENST00000412274 PLEKHG4BQ96PX9 1271 aa16.11■□□□□ 0.17
DDR1-230ENST00000412274 ALS2CR12Q96Q35 445 aa16.11■□□□□ 0.17
DDR1-230ENST00000412274 TMEM168Q9H0V1 697 aa16.11■□□□□ 0.17
DDR1-230ENST00000412274 MRPL40Q9NQ50 206 aaKnown RBP16.11■□□□□ 0.17
DDR1-230ENST00000412274 GULP1Q9UBP9 304 aa16.11■□□□□ 0.17
DDR1-230ENST00000412274 SUFUQ9UMX1 484 aa16.11■□□□□ 0.17
DDR1-230ENST00000412274 GUCA1BQ9UMX6 200 aa16.11■□□□□ 0.17
DDR1-230ENST00000412274 ZNF711Q9Y462 761 aa16.11■□□□□ 0.17
DDR1-230ENST00000412274 CEP295Q9C0D2 2601 aa16.1■□□□□ 0.17
DDR1-230ENST00000412274 TRABD2BA6NFA1 517 aa16.1■□□□□ 0.17
DDR1-230ENST00000412274 TMX2-CTNND1H3BSU7 103 aa16.1■□□□□ 0.17
DDR1-230ENST00000412274 DDX3YO15523 660 aaKnown RBP16.1■□□□□ 0.17
DDR1-230ENST00000412274 FTCDO95954 541 aa16.1■□□□□ 0.17
DDR1-230ENST00000412274 GLB1P16278 677 aa16.1■□□□□ 0.17
DDR1-230ENST00000412274 GNPDA1P46926 289 aa16.1■□□□□ 0.17
DDR1-230ENST00000412274 SLC1A5Q15758 541 aa16.1■□□□□ 0.17
DDR1-230ENST00000412274 SEL1L2Q5TEA6 688 aa16.1■□□□□ 0.17
DDR1-230ENST00000412274 GUSBP11Q6P575 273 aa16.1■□□□□ 0.17
DDR1-230ENST00000412274 B4GALNT4Q76KP1 1039 aa16.1■□□□□ 0.17
DDR1-230ENST00000412274 MRGPRX2Q96LB1 330 aa16.1■□□□□ 0.17
DDR1-230ENST00000412274 SPATA13Q96N96 652 aa16.1■□□□□ 0.17
DDR1-230ENST00000412274 C19orf43Q9BQ61 176 aa16.1■□□□□ 0.17
DDR1-230ENST00000412274 DPEP2Q9H4A9 486 aa16.1■□□□□ 0.17
DDR1-230ENST00000412274 TRIM10Q9UDY6 481 aa16.1■□□□□ 0.17
DDR1-230ENST00000412274 FEZ2Q9UHY8 353 aaPredicted RBP16.1■□□□□ 0.17
DDR1-230ENST00000412274 APPL1Q9UKG1 709 aa16.1■□□□□ 0.17
DDR1-230ENST00000412274 PLXNB3Q9ULL4 1909 aa16.09■□□□□ 0.17
DDR1-230ENST00000412274 C5orf60A6NFR6 353 aa16.09■□□□□ 0.17
DDR1-230ENST00000412274 KCNN4O15554 427 aa16.09■□□□□ 0.17
DDR1-230ENST00000412274 NUDT21O43809 227 aaKnown RBP16.09■□□□□ 0.17
DDR1-230ENST00000412274 CELA2BP08218 269 aaPredicted RBP16.09■□□□□ 0.17
DDR1-230ENST00000412274 PDE1BQ01064 536 aa16.09■□□□□ 0.17
DDR1-230ENST00000412274 KLF1Q13351 362 aaPredicted RBP16.09■□□□□ 0.17
DDR1-230ENST00000412274 RTP5Q14D33 572 aa16.09■□□□□ 0.17
DDR1-230ENST00000412274 SIRPB2Q5JXA9 342 aa16.09■□□□□ 0.17
DDR1-230ENST00000412274 ZNF569Q5MCW4 686 aa16.09■□□□□ 0.17
DDR1-230ENST00000412274 ANKRD20A2Q5SQ80 823 aa16.09■□□□□ 0.17
DDR1-230ENST00000412274 ANKRD20A1Q5TYW2 823 aa16.09■□□□□ 0.17
DDR1-230ENST00000412274 ANKRD20A3Q5VUR7 823 aa16.09■□□□□ 0.17
DDR1-230ENST00000412274 RFLNAQ6ZTI6 216 aa16.09■□□□□ 0.17
DDR1-230ENST00000412274 GALNT13Q8IUC8 556 aa16.09■□□□□ 0.17
DDR1-230ENST00000412274 LSMEM2Q8N112 164 aa16.09■□□□□ 0.17
DDR1-230ENST00000412274 SMIM14Q96QK8 99 aa16.09■□□□□ 0.17
DDR1-230ENST00000412274 OR2M4Q96R27 311 aa16.09■□□□□ 0.17
DDR1-230ENST00000412274 WDR24Q96S15 920 aa16.09■□□□□ 0.17
DDR1-230ENST00000412274 SPATA16Q9BXB7 569 aa16.09■□□□□ 0.17
DDR1-230ENST00000412274 UBP1Q9NZI7 540 aa16.09■□□□□ 0.17
DDR1-230ENST00000412274 ZMIZ1Q9ULJ6 1067 aa16.09■□□□□ 0.17
DDR1-230ENST00000412274 SHOC2Q9UQ13 582 aa16.09■□□□□ 0.17
DDR1-230ENST00000412274 CAPN6Q9Y6Q1 641 aa16.09■□□□□ 0.17
DDR1-230ENST00000412274 A0A0U1RQS6 177 aa16.08■□□□□ 0.16
DDR1-230ENST00000412274 FAM149AA5PLN7 773 aa16.08■□□□□ 0.16
DDR1-230ENST00000412274 PSMD3O43242 534 aa16.08■□□□□ 0.16
DDR1-230ENST00000412274 ASMTLO95671 621 aa16.08■□□□□ 0.16
DDR1-230ENST00000412274 CAPNS1P04632 268 aa16.08■□□□□ 0.16
DDR1-230ENST00000412274 STIP1P31948 543 aaKnown RBP16.08■□□□□ 0.16
DDR1-230ENST00000412274 ADCY8P40145 1251 aa16.08■□□□□ 0.16
DDR1-230ENST00000412274 C14orf28Q4W4Y0 310 aa16.08■□□□□ 0.16
DDR1-230ENST00000412274 PYCR3Q53H96 274 aa16.08■□□□□ 0.16
DDR1-230ENST00000412274 RBM44Q6ZP01 1051 aaKnown RBP16.08■□□□□ 0.16
DDR1-230ENST00000412274 PROSER1Q86XN7 944 aa16.08■□□□□ 0.16
DDR1-230ENST00000412274 PHYKPLQ8IUZ5 450 aa16.08■□□□□ 0.16
DDR1-230ENST00000412274 KYQ8NBH2 561 aa16.08■□□□□ 0.16
DDR1-230ENST00000412274 IPMKQ8NFU5 416 aa16.08■□□□□ 0.16
DDR1-230ENST00000412274 TRIM58Q8NG06 486 aa16.08■□□□□ 0.16
DDR1-230ENST00000412274 BRSK1Q8TDC3 778 aa16.08■□□□□ 0.16
DDR1-230ENST00000412274 OXNAD1Q96HP4 312 aaPredicted RBP16.08■□□□□ 0.16
DDR1-230ENST00000412274 VPS35Q96QK1 796 aa16.08■□□□□ 0.16
DDR1-230ENST00000412274 CCDC3Q9BQI4 270 aa16.08■□□□□ 0.16
DDR1-230ENST00000412274 HERPUD2Q9BSE4 406 aa16.08■□□□□ 0.16
DDR1-230ENST00000412274 CARD9Q9H257 536 aa16.08■□□□□ 0.16
DDR1-230ENST00000412274 TRIM39Q9HCM9 518 aa16.08■□□□□ 0.16
DDR1-230ENST00000412274 TAAR2Q9P1P5 351 aa16.08■□□□□ 0.16
DDR1-230ENST00000412274 CNOT6Q9ULM6 557 aaKnown RBP16.08■□□□□ 0.16
DDR1-230ENST00000412274 PACSIN2Q9UNF0 486 aaPredicted RBP16.08■□□□□ 0.16
DDR1-230ENST00000412274 PKP3Q9Y446 797 aa16.08■□□□□ 0.16
DDR1-230ENST00000412274 GPSM3Q9Y4H4 160 aa16.08■□□□□ 0.16
DDR1-230ENST00000412274 CHD8Q9HCK8 2581 aa16.07■□□□□ 0.16
DDR1-230ENST00000412274 C2orf81A6NN90 581 aa16.07■□□□□ 0.16
DDR1-230ENST00000412274 INPP4BO15327 924 aa16.07■□□□□ 0.16
DDR1-230ENST00000412274 VEGFDO43915 354 aa16.07■□□□□ 0.16
DDR1-230ENST00000412274 SLC25A14O95258 325 aaPredicted RBP16.07■□□□□ 0.16
DDR1-230ENST00000412274 SLC2A4P14672 509 aa16.07■□□□□ 0.16
DDR1-230ENST00000412274 CTBSQ01459 385 aa16.07■□□□□ 0.16
DDR1-230ENST00000412274 SPIDRQ14159 915 aa16.07■□□□□ 0.16
DDR1-230ENST00000412274 RPS6KA1Q15418 735 aa16.07■□□□□ 0.16
DDR1-230ENST00000412274 CLPPQ16740 277 aaPredicted RBP16.07■□□□□ 0.16
DDR1-230ENST00000412274 PARP6Q2NL67 630 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms