RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 PFKFB4Q16877 469 aa16.63■□□□□ 0.25
LIMS2-208ENST00000410011 LPCAT2Q7L5N7 544 aa16.63■□□□□ 0.25
LIMS2-208ENST00000410011 ADGRG5Q8IZF4 528 aa16.63■□□□□ 0.25
LIMS2-208ENST00000410011 SNX31Q8N9S9 440 aa16.63■□□□□ 0.25
LIMS2-208ENST00000410011 OR4L1Q8NH43 312 aa16.63■□□□□ 0.25
LIMS2-208ENST00000410011 LRCH3Q96II8 777 aa16.63■□□□□ 0.25
LIMS2-208ENST00000410011 NUSAP1Q9BXS6 441 aaKnown RBP16.63■□□□□ 0.25
LIMS2-208ENST00000410011 POLG2Q9UHN1 485 aa16.63■□□□□ 0.25
LIMS2-208ENST00000410011 KCTD3Q9Y597 815 aa16.63■□□□□ 0.25
LIMS2-208ENST00000410011 DOCK3Q8IZD9 2030 aa16.63■□□□□ 0.25
LIMS2-208ENST00000410011 SCN10AQ9Y5Y9 1956 aa16.63■□□□□ 0.25
LIMS2-208ENST00000410011 UBXN8O00124 270 aa16.63■□□□□ 0.25
LIMS2-208ENST00000410011 MGEA5O60502 916 aa16.63■□□□□ 0.25
LIMS2-208ENST00000410011 CLASP2O75122 1294 aaKnown RBP16.63■□□□□ 0.25
LIMS2-208ENST00000410011 OAZ2O95190 189 aa16.63■□□□□ 0.25
LIMS2-208ENST00000410011 RASAL1O95294 804 aa16.63■□□□□ 0.25
LIMS2-208ENST00000410011 SIX3O95343 332 aaPredicted RBP16.63■□□□□ 0.25
LIMS2-208ENST00000410011 MT-CO1P00395 513 aa16.63■□□□□ 0.25
LIMS2-208ENST00000410011 NPPAP01160 153 aa16.63■□□□□ 0.25
LIMS2-208ENST00000410011 CTSHP09668 335 aa16.63■□□□□ 0.25
LIMS2-208ENST00000410011 PSMA3P25788 255 aa16.63■□□□□ 0.25
LIMS2-208ENST00000410011 FOXA1P55317 472 aa16.63■□□□□ 0.25
LIMS2-208ENST00000410011 CLCQ05315 142 aa16.63■□□□□ 0.25
LIMS2-208ENST00000410011 ZBED5Q49AG3 693 aa16.63■□□□□ 0.25
LIMS2-208ENST00000410011 PITRM1Q5JRX3 1037 aa16.63■□□□□ 0.25
LIMS2-208ENST00000410011 TMTC4Q5T4D3 741 aa16.63■□□□□ 0.25
LIMS2-208ENST00000410011 SPPL2CQ8IUH8 684 aa16.63■□□□□ 0.25
LIMS2-208ENST00000410011 EPHX4Q8IUS5 362 aa16.63■□□□□ 0.25
LIMS2-208ENST00000410011 SPNS2Q8IVW8 549 aa16.63■□□□□ 0.25
LIMS2-208ENST00000410011 CBR4Q8N4T8 237 aa16.63■□□□□ 0.25
LIMS2-208ENST00000410011 PNPLA1Q8N8W4 532 aa16.63■□□□□ 0.25
LIMS2-208ENST00000410011 DIS3LQ8TF46 1054 aaKnown RBP16.63■□□□□ 0.25
LIMS2-208ENST00000410011 ADI1Q9BV57 179 aa16.63■□□□□ 0.25
LIMS2-208ENST00000410011 ZNF408Q9H9D4 720 aa16.63■□□□□ 0.25
LIMS2-208ENST00000410011 CPA4Q9UI42 421 aa16.63■□□□□ 0.25
LIMS2-208ENST00000410011 FAM92AA1XBS5 289 aa16.62■□□□□ 0.25
LIMS2-208ENST00000410011 CCDC162PA2VCL2 907 aa16.62■□□□□ 0.25
LIMS2-208ENST00000410011 LCHNA4D1U4 455 aa16.62■□□□□ 0.25
LIMS2-208ENST00000410011 H3BMM5 538 aa16.62■□□□□ 0.25
LIMS2-208ENST00000410011 PPP6CO00743 305 aa16.62■□□□□ 0.25
LIMS2-208ENST00000410011 STX16O14662 325 aa16.62■□□□□ 0.25
LIMS2-208ENST00000410011 KLK8O60259 260 aa16.62■□□□□ 0.25
LIMS2-208ENST00000410011 RAMP2O60895 175 aa16.62■□□□□ 0.25
LIMS2-208ENST00000410011 HGFP14210 728 aa16.62■□□□□ 0.25
LIMS2-208ENST00000410011 EMP3P54852 163 aa16.62■□□□□ 0.25
LIMS2-208ENST00000410011 ESRRGP62508 458 aa16.62■□□□□ 0.25
LIMS2-208ENST00000410011 MTA1Q13330 715 aa16.62■□□□□ 0.25
LIMS2-208ENST00000410011 POLD3Q15054 466 aaPredicted RBP16.62■□□□□ 0.25
LIMS2-208ENST00000410011 TRIP4Q15650 581 aaPredicted RBP16.62■□□□□ 0.25
LIMS2-208ENST00000410011 FXNQ16595 210 aa16.62■□□□□ 0.25
LIMS2-208ENST00000410011 NFE2Q16621 373 aaPredicted RBP16.62■□□□□ 0.25
LIMS2-208ENST00000410011 FBXL22Q6P050 247 aa16.62■□□□□ 0.25
LIMS2-208ENST00000410011 GRIN3AQ8TCU5 1115 aa16.62■□□□□ 0.25
LIMS2-208ENST00000410011 HASPINQ8TF76 798 aa16.62■□□□□ 0.25
LIMS2-208ENST00000410011 TMIGD2Q96BF3 282 aa16.62■□□□□ 0.25
LIMS2-208ENST00000410011 TUBGCP3Q96CW5 907 aa16.62■□□□□ 0.25
LIMS2-208ENST00000410011 ZNF599Q96NL3 588 aa16.62■□□□□ 0.25
LIMS2-208ENST00000410011 YTHDF1Q9BYJ9 559 aaKnown RBP16.62■□□□□ 0.25
LIMS2-208ENST00000410011 CATSPERZQ9NTU4 200 aa16.62■□□□□ 0.25
LIMS2-208ENST00000410011 SMOXQ9NWM0 555 aa16.62■□□□□ 0.25
LIMS2-208ENST00000410011 PLXNA3P51805 1871 aa16.62■□□□□ 0.25
LIMS2-208ENST00000410011 IQCA1LA6NCM1 817 aa16.62■□□□□ 0.25
LIMS2-208ENST00000410011 CCL22O00626 93 aa16.62■□□□□ 0.25
LIMS2-208ENST00000410011 ACOX3O15254 700 aa16.62■□□□□ 0.25
LIMS2-208ENST00000410011 ITGB1P05556 798 aa16.62■□□□□ 0.25
LIMS2-208ENST00000410011 RPS17P08708 135 aaKnown RBP16.62■□□□□ 0.25
LIMS2-208ENST00000410011 GFAPP14136 432 aa16.62■□□□□ 0.25
LIMS2-208ENST00000410011 TTKP33981 857 aa16.62■□□□□ 0.25
LIMS2-208ENST00000410011 MAPKAPK2P49137 400 aa16.62■□□□□ 0.25
LIMS2-208ENST00000410011 NUP107P57740 925 aa16.62■□□□□ 0.25
LIMS2-208ENST00000410011 RCAN2Q14206 197 aa16.62■□□□□ 0.25
LIMS2-208ENST00000410011 RPS6KA2Q15349 733 aa16.62■□□□□ 0.25
LIMS2-208ENST00000410011 ANKS6Q68DC2 871 aa16.62■□□□□ 0.25
LIMS2-208ENST00000410011 TMEM125Q96AQ2 219 aa16.62■□□□□ 0.25
LIMS2-208ENST00000410011 SEMA3CQ99985 751 aa16.62■□□□□ 0.25
LIMS2-208ENST00000410011 PFDN4Q9NQP4 134 aa16.62■□□□□ 0.25
LIMS2-208ENST00000410011 OLA1Q9NTK5 396 aaKnown RBP16.62■□□□□ 0.25
LIMS2-208ENST00000410011 GMPR2Q9P2T1 348 aaKnown RBP16.62■□□□□ 0.25
LIMS2-208ENST00000410011 TDRD15B5MCY1 1934 aaKnown RBP16.61■□□□□ 0.25
LIMS2-208ENST00000410011 GRXCR2A6NFK2 248 aa16.61■□□□□ 0.25
LIMS2-208ENST00000410011 SYCE1LA8MT33 242 aa16.61■□□□□ 0.25
LIMS2-208ENST00000410011 ARPC2O15144 300 aa16.61■□□□□ 0.25
LIMS2-208ENST00000410011 PRAMEF11O60813 436 aa16.61■□□□□ 0.25
LIMS2-208ENST00000410011 SLC4A1P02730 911 aa16.61■□□□□ 0.25
LIMS2-208ENST00000410011 CD9P21926 228 aa16.61■□□□□ 0.25
LIMS2-208ENST00000410011 EEFSECP57772 596 aaKnown RBP16.61■□□□□ 0.25
LIMS2-208ENST00000410011 SEMA3AQ14563 771 aa16.61■□□□□ 0.25
LIMS2-208ENST00000410011 AASDHQ4L235 1098 aaPredicted RBP16.61■□□□□ 0.25
LIMS2-208ENST00000410011 CROCCP3Q8IVE0 287 aa16.61■□□□□ 0.25
LIMS2-208ENST00000410011 SCN4BQ8IWT1 228 aa16.61■□□□□ 0.25
LIMS2-208ENST00000410011 DDIASQ8IXT1 998 aa16.61■□□□□ 0.25
LIMS2-208ENST00000410011 CMTR2Q8IYT2 770 aaKnown RBP16.61■□□□□ 0.25
LIMS2-208ENST00000410011 SEPT8Q92599 483 aa16.61■□□□□ 0.25
LIMS2-208ENST00000410011 IGSF8Q969P0 613 aa16.61■□□□□ 0.25
LIMS2-208ENST00000410011 BRINP2Q9C0B6 783 aa16.61■□□□□ 0.25
LIMS2-208ENST00000410011 AIG1Q9NVV5 245 aa16.61■□□□□ 0.25
LIMS2-208ENST00000410011 AURKCQ9UQB9 309 aa16.61■□□□□ 0.25
LIMS2-208ENST00000410011 OAS3Q9Y6K5 1087 aaKnown RBP16.61■□□□□ 0.25
LIMS2-208ENST00000410011 BPTFQ12830 3046 aa16.61■□□□□ 0.25
LIMS2-208ENST00000410011 TCRBV5S2A0A599 114 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms