RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 AGTP01019 485 aa7.48□□□□□ -1.21
USP16-204ENST00000399976 CTAGE8P0CG41 777 aa7.48□□□□□ -1.21
USP16-204ENST00000399976 SLC2A4P14672 509 aa7.48□□□□□ -1.21
USP16-204ENST00000399976 BPIP17213 487 aa7.48□□□□□ -1.21
USP16-204ENST00000399976 ITPKAP23677 461 aa7.48□□□□□ -1.21
USP16-204ENST00000399976 ATP5DP30049 168 aa7.48□□□□□ -1.21
USP16-204ENST00000399976 HNRNPKP61978 463 aaKnown RBP eCLIP7.48□□□□□ -1.21
USP16-204ENST00000399976 BNC1Q01954 994 aa7.48□□□□□ -1.21
USP16-204ENST00000399976 PLOD1Q02809 727 aaPredicted RBP7.48□□□□□ -1.21
USP16-204ENST00000399976 GALNT3Q14435 633 aa7.48□□□□□ -1.21
USP16-204ENST00000399976 NR1D2Q14995 579 aa7.48□□□□□ -1.21
USP16-204ENST00000399976 ACOX1Q15067 660 aa7.48□□□□□ -1.21
USP16-204ENST00000399976 TYSND1Q2T9J0 566 aa7.48□□□□□ -1.21
USP16-204ENST00000399976 SPANXN3Q5MJ09 141 aa7.48□□□□□ -1.21
USP16-204ENST00000399976 KIAA0408Q6ZU52 694 aa7.48□□□□□ -1.21
USP16-204ENST00000399976 PIP4P1Q86T03 277 aa7.48□□□□□ -1.21
USP16-204ENST00000399976 CTAGE6Q86UF2 777 aa7.48□□□□□ -1.21
USP16-204ENST00000399976 CAND1Q86VP6 1230 aaKnown RBP7.48□□□□□ -1.21
USP16-204ENST00000399976 C17orf82Q86X59 251 aaPredicted RBP7.48□□□□□ -1.21
USP16-204ENST00000399976 CTAGE4Q8IX94 777 aa7.48□□□□□ -1.21
USP16-204ENST00000399976 ZFPM2Q8WW38 1151 aa7.48□□□□□ -1.21
USP16-204ENST00000399976 RLN3Q8WXF3 142 aa7.48□□□□□ -1.21
USP16-204ENST00000399976 AP2M1Q96CW1 435 aa7.48□□□□□ -1.21
USP16-204ENST00000399976 EID2BQ96D98 161 aa7.48□□□□□ -1.21
USP16-204ENST00000399976 FAM122AQ96E09 287 aa7.48□□□□□ -1.21
USP16-204ENST00000399976 SERPINB12Q96P63 405 aa7.48□□□□□ -1.21
USP16-204ENST00000399976 ELF4Q99607 663 aaPredicted RBP7.48□□□□□ -1.21
USP16-204ENST00000399976 TTC1Q99614 292 aa7.48□□□□□ -1.21
USP16-204ENST00000399976 DDX47Q9H0S4 455 aaKnown RBP7.48□□□□□ -1.21
USP16-204ENST00000399976 TRIM39Q9HCM9 518 aa7.48□□□□□ -1.21
USP16-204ENST00000399976 INTS10Q9NVR2 710 aaKnown RBP7.48□□□□□ -1.21
USP16-204ENST00000399976 EIF2B4Q9UI10 523 aaKnown RBP7.48□□□□□ -1.21
USP16-204ENST00000399976 GGT7Q9UJ14 662 aa7.48□□□□□ -1.21
USP16-204ENST00000399976 CNOT6Q9ULM6 557 aaKnown RBP7.48□□□□□ -1.21
USP16-204ENST00000399976 GLYATL1P3A0A0U1RQE8 302 aa7.48□□□□□ -1.21
USP16-204ENST00000399976 SLC30A4O14863 429 aa7.48□□□□□ -1.21
USP16-204ENST00000399976 PFDN6O15212 129 aa7.48□□□□□ -1.21
USP16-204ENST00000399976 TP73O15350 636 aa7.48□□□□□ -1.21
USP16-204ENST00000399976 BNIP3LO60238 219 aa7.48□□□□□ -1.21
USP16-204ENST00000399976 WNT1P04628 370 aa7.48□□□□□ -1.21
USP16-204ENST00000399976 PGAM1P18669 254 aa7.48□□□□□ -1.21
USP16-204ENST00000399976 EPHA8P29322 1005 aaPredicted RBP7.48□□□□□ -1.21
USP16-204ENST00000399976 HOXD11P31277 338 aaPredicted RBP7.48□□□□□ -1.21
USP16-204ENST00000399976 MAPK9P45984 424 aa7.48□□□□□ -1.21
USP16-204ENST00000399976 ARRB1P49407 418 aaPredicted RBP7.48□□□□□ -1.21
USP16-204ENST00000399976 GUCY2DQ02846 1103 aa7.48□□□□□ -1.21
USP16-204ENST00000399976 GRIK2Q13002 908 aa7.48□□□□□ -1.21
USP16-204ENST00000399976 SNX1Q13596 522 aa7.48□□□□□ -1.21
USP16-204ENST00000399976 FZD2Q14332 565 aa7.48□□□□□ -1.21
USP16-204ENST00000399976 OGFOD3Q6PK18 319 aa7.48□□□□□ -1.21
USP16-204ENST00000399976 PRR23BQ6ZRT6 265 aa7.48□□□□□ -1.21
USP16-204ENST00000399976 GLIS1Q8NBF1 620 aa7.48□□□□□ -1.21
USP16-204ENST00000399976 WDR48Q8TAF3 677 aa7.48□□□□□ -1.21
USP16-204ENST00000399976 CALML6Q8TD86 181 aa7.48□□□□□ -1.21
USP16-204ENST00000399976 GLYATL1Q969I3 302 aa7.48□□□□□ -1.21
USP16-204ENST00000399976 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.48□□□□□ -1.21
USP16-204ENST00000399976 SLC6A18Q96N87 628 aa7.48□□□□□ -1.21
USP16-204ENST00000399976 NLGN3Q9NZ94 848 aa7.48□□□□□ -1.21
USP16-204ENST00000399976 STX7O15400 261 aaKnown RBP7.47□□□□□ -1.21
USP16-204ENST00000399976 CLDN7O95471 211 aa7.47□□□□□ -1.21
USP16-204ENST00000399976 THEGLP0DJG4 465 aa7.47□□□□□ -1.21
USP16-204ENST00000399976 ITGALP20701 1170 aa7.47□□□□□ -1.21
USP16-204ENST00000399976 PXNP49023 591 aaPredicted RBP7.47□□□□□ -1.21
USP16-204ENST00000399976 ARL4CP56559 192 aa7.47□□□□□ -1.21
USP16-204ENST00000399976 RPA4Q13156 261 aa7.47□□□□□ -1.21
USP16-204ENST00000399976 TSPAN33Q86UF1 283 aa7.47□□□□□ -1.21
USP16-204ENST00000399976 SPATS2Q86XZ4 545 aaKnown RBP7.47□□□□□ -1.21
USP16-204ENST00000399976 RBM12BQ8IXT5 1001 aaKnown RBP7.47□□□□□ -1.21
USP16-204ENST00000399976 SLC22A18ASQ8N1D0 253 aa7.47□□□□□ -1.21
USP16-204ENST00000399976 OR56A4Q8NGH8 313 aa7.47□□□□□ -1.21
USP16-204ENST00000399976 GPBAR1Q8TDU6 330 aa7.47□□□□□ -1.21
USP16-204ENST00000399976 FUBP1Q96AE4 644 aaKnown RBP7.47□□□□□ -1.21
USP16-204ENST00000399976 SIGLEC10Q96LC7 697 aa7.47□□□□□ -1.21
USP16-204ENST00000399976 ARRDC1-AS1Q9H2J1 176 aa7.47□□□□□ -1.21
USP16-204ENST00000399976 TMEM9BQ9NQ34 198 aa7.47□□□□□ -1.21
USP16-204ENST00000399976 SPASTQ9UBP0 616 aa7.47□□□□□ -1.21
USP16-204ENST00000399976 ITM2BQ9Y287 266 aa7.47□□□□□ -1.21
USP16-204ENST00000399976 DOCK9Q9BZ29 2069 aa7.47□□□□□ -1.21
USP16-204ENST00000399976 H3BMM5 538 aa7.47□□□□□ -1.21
USP16-204ENST00000399976 TM4SF5O14894 197 aa7.47□□□□□ -1.21
USP16-204ENST00000399976 RAD51BO15315 384 aa7.47□□□□□ -1.21
USP16-204ENST00000399976 TMEM63AO94886 807 aa7.47□□□□□ -1.21
USP16-204ENST00000399976 IFNB1P01574 187 aa7.47□□□□□ -1.21
USP16-204ENST00000399976 APRTP07741 180 aa7.47□□□□□ -1.21
USP16-204ENST00000399976 FOXN2P32314 431 aa7.47□□□□□ -1.21
USP16-204ENST00000399976 KCNJ1P48048 391 aa7.47□□□□□ -1.21
USP16-204ENST00000399976 POLD2P49005 469 aa7.47□□□□□ -1.21
USP16-204ENST00000399976 BASP1P80723 227 aaKnown RBP7.47□□□□□ -1.21
USP16-204ENST00000399976 SRSF5Q13243 272 aaKnown RBP7.47□□□□□ -1.21
USP16-204ENST00000399976 NFATC2Q13469 925 aa7.47□□□□□ -1.21
USP16-204ENST00000399976 SQSTM1Q13501 440 aa7.47□□□□□ -1.21
USP16-204ENST00000399976 ZNF658BQ4V348 819 aaPredicted RBP7.47□□□□□ -1.21
USP16-204ENST00000399976 TRIM61Q5EBN2 209 aa7.47□□□□□ -1.21
USP16-204ENST00000399976 IZUMO3Q5VZ72 239 aa7.47□□□□□ -1.21
USP16-204ENST00000399976 CCDC91Q7Z6B0 441 aa7.47□□□□□ -1.21
USP16-204ENST00000399976 FAM124AQ86V42 546 aa7.47□□□□□ -1.21
USP16-204ENST00000399976 GPR26Q8NDV2 337 aa7.47□□□□□ -1.21
USP16-204ENST00000399976 GRAMD1AQ96CP6 724 aa7.47□□□□□ -1.21
USP16-204ENST00000399976 CDC6Q99741 560 aa7.47□□□□□ -1.21
USP16-204ENST00000399976 CEP41Q9BYV8 373 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms