RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 PAQR9Q6ZVX9 377 aa13.19□□□□□ -0.3
NFKB1-202ENST00000394820 MARVELD2Q8N4S9 558 aa13.19□□□□□ -0.3
NFKB1-202ENST00000394820 GAB3Q8WWW8 586 aa13.19□□□□□ -0.3
NFKB1-202ENST00000394820 ISOC1Q96CN7 298 aa13.19□□□□□ -0.3
NFKB1-202ENST00000394820 PLAC1Q9HBJ0 212 aa13.19□□□□□ -0.3
NFKB1-202ENST00000394820 SACM1LQ9NTJ5 587 aa13.19□□□□□ -0.3
NFKB1-202ENST00000394820 MAGEB16A2A368 324 aa13.19□□□□□ -0.3
NFKB1-202ENST00000394820 H0Y858 1186 aa13.19□□□□□ -0.3
NFKB1-202ENST00000394820 AZIN1O14977 448 aa13.19□□□□□ -0.3
NFKB1-202ENST00000394820 H2AFYO75367 372 aaKnown RBP13.19□□□□□ -0.3
NFKB1-202ENST00000394820 DAB1O75553 588 aa13.19□□□□□ -0.3
NFKB1-202ENST00000394820 LBPP18428 481 aa13.19□□□□□ -0.3
NFKB1-202ENST00000394820 AQP1P29972 269 aa13.19□□□□□ -0.3
NFKB1-202ENST00000394820 RXRGP48443 463 aa13.19□□□□□ -0.3
NFKB1-202ENST00000394820 APLP1P51693 650 aa13.19□□□□□ -0.3
NFKB1-202ENST00000394820 NKX2-5P52952 324 aaPredicted RBP13.19□□□□□ -0.3
NFKB1-202ENST00000394820 RHDQ02161 417 aa13.19□□□□□ -0.3
NFKB1-202ENST00000394820 SH2D5Q6ZV89 423 aa13.19□□□□□ -0.3
NFKB1-202ENST00000394820 SLC44A2Q8IWA5 706 aaPredicted RBP13.19□□□□□ -0.3
NFKB1-202ENST00000394820 RAVER1Q8IY67 606 aaKnown RBP13.19□□□□□ -0.3
NFKB1-202ENST00000394820 PNPT1Q8TCS8 783 aaKnown RBP13.19□□□□□ -0.3
NFKB1-202ENST00000394820 TWIST2Q8WVJ9 160 aa13.19□□□□□ -0.3
NFKB1-202ENST00000394820 AGO3Q9H9G7 860 aaKnown RBP13.19□□□□□ -0.3
NFKB1-202ENST00000394820 SMURF2Q9HAU4 748 aa13.19□□□□□ -0.3
NFKB1-202ENST00000394820 URB1O60287 2271 aaKnown RBP13.19□□□□□ -0.3
NFKB1-202ENST00000394820 MTSS1O43312 755 aa13.18□□□□□ -0.3
NFKB1-202ENST00000394820 KPNA6O60684 536 aa13.18□□□□□ -0.3
NFKB1-202ENST00000394820 CHRM5P08912 532 aaPredicted RBP13.18□□□□□ -0.3
NFKB1-202ENST00000394820 MLNP12872 115 aa13.18□□□□□ -0.3
NFKB1-202ENST00000394820 ALOX12P18054 663 aa13.18□□□□□ -0.3
NFKB1-202ENST00000394820 OR1G1P47890 313 aa13.18□□□□□ -0.3
NFKB1-202ENST00000394820 DAOAP59103 153 aa13.18□□□□□ -0.3
NFKB1-202ENST00000394820 TAF2Q6P1X5 1199 aa13.18□□□□□ -0.3
NFKB1-202ENST00000394820 PGM2L1Q6PCE3 622 aa13.18□□□□□ -0.3
NFKB1-202ENST00000394820 CRTC3Q6UUV7 619 aa13.18□□□□□ -0.3
NFKB1-202ENST00000394820 CALML6Q8TD86 181 aa13.18□□□□□ -0.3
NFKB1-202ENST00000394820 KCNN1Q92952 543 aa13.18□□□□□ -0.3
NFKB1-202ENST00000394820 FAM193BQ96PV7 902 aaPredicted RBP13.18□□□□□ -0.3
NFKB1-202ENST00000394820 SEMA3CQ99985 751 aa13.18□□□□□ -0.3
NFKB1-202ENST00000394820 BDH2Q9BUT1 245 aa13.18□□□□□ -0.3
NFKB1-202ENST00000394820 MLPHQ9BV36 600 aaPredicted RBP13.18□□□□□ -0.3
NFKB1-202ENST00000394820 CHID1Q9BWS9 393 aa13.18□□□□□ -0.3
NFKB1-202ENST00000394820 TIMMDC1Q9NPL8 285 aa13.18□□□□□ -0.3
NFKB1-202ENST00000394820 OLA1Q9NTK5 396 aaKnown RBP13.18□□□□□ -0.3
NFKB1-202ENST00000394820 VPS51Q9UID3 782 aa13.18□□□□□ -0.3
NFKB1-202ENST00000394820 DERAQ9Y315 318 aa13.18□□□□□ -0.3
NFKB1-202ENST00000394820 TCAF2A6NFQ2 919 aa13.18□□□□□ -0.3
NFKB1-202ENST00000394820 TBX18O95935 607 aa13.18□□□□□ -0.3
NFKB1-202ENST00000394820 NTRK1P04629 796 aa13.18□□□□□ -0.3
NFKB1-202ENST00000394820 SMIM18P0DKX4 95 aa13.18□□□□□ -0.3
NFKB1-202ENST00000394820 RPS9P46781 194 aaKnown RBP13.18□□□□□ -0.3
NFKB1-202ENST00000394820 SERPINH1P50454 418 aaKnown RBP13.18□□□□□ -0.3
NFKB1-202ENST00000394820 PMS2P3Q13401 168 aa13.18□□□□□ -0.3
NFKB1-202ENST00000394820 TUBB3Q13509 450 aa13.18□□□□□ -0.3
NFKB1-202ENST00000394820 DDR2Q16832 855 aa13.18□□□□□ -0.3
NFKB1-202ENST00000394820 GLYATQ6IB77 296 aa13.18□□□□□ -0.3
NFKB1-202ENST00000394820 TAC4Q86UU9 113 aa13.18□□□□□ -0.3
NFKB1-202ENST00000394820 HS3ST5Q8IZT8 346 aa13.18□□□□□ -0.3
NFKB1-202ENST00000394820 ATG16L2Q8NAA4 619 aa13.18□□□□□ -0.3
NFKB1-202ENST00000394820 OR6K2Q8NGY2 324 aa13.18□□□□□ -0.3
NFKB1-202ENST00000394820 UPF1Q92900 1129 aaKnown RBP eCLIP13.18□□□□□ -0.3
NFKB1-202ENST00000394820 ASB9Q96DX5 294 aa13.18□□□□□ -0.3
NFKB1-202ENST00000394820 ZFYVE19Q96K21 471 aa13.18□□□□□ -0.3
NFKB1-202ENST00000394820 RAD21L1Q9H4I0 556 aa13.18□□□□□ -0.3
NFKB1-202ENST00000394820 NSMCE4AQ9NXX6 385 aa13.18□□□□□ -0.3
NFKB1-202ENST00000394820 SOAT2O75908 522 aa13.18□□□□□ -0.3
NFKB1-202ENST00000394820 MRPS6P82932 125 aaKnown RBP13.18□□□□□ -0.3
NFKB1-202ENST00000394820 NIPAL4Q0D2K0 466 aa13.18□□□□□ -0.3
NFKB1-202ENST00000394820 TRIM32Q13049 653 aa13.18□□□□□ -0.3
NFKB1-202ENST00000394820 CYP2A13Q16696 494 aa13.18□□□□□ -0.3
NFKB1-202ENST00000394820 PTPRNQ16849 979 aa13.18□□□□□ -0.3
NFKB1-202ENST00000394820 RAP1GAP2Q684P5 730 aa13.18□□□□□ -0.3
NFKB1-202ENST00000394820 ANKS6Q68DC2 871 aa13.18□□□□□ -0.3
NFKB1-202ENST00000394820 GDF6Q6KF10 455 aaPredicted RBP13.18□□□□□ -0.3
NFKB1-202ENST00000394820 SLCO6A1Q86UG4 719 aa13.18□□□□□ -0.3
NFKB1-202ENST00000394820 FIBCD1Q8N539 461 aa13.18□□□□□ -0.3
NFKB1-202ENST00000394820 TNIP2Q8NFZ5 429 aa13.18□□□□□ -0.3
NFKB1-202ENST00000394820 MUS81Q96NY9 551 aa13.18□□□□□ -0.3
NFKB1-202ENST00000394820 NPY6RQ99463 290 aa13.18□□□□□ -0.3
NFKB1-202ENST00000394820 REXO4Q9GZR2 422 aaKnown RBP13.18□□□□□ -0.3
NFKB1-202ENST00000394820 GLOD4Q9HC38 313 aa13.18□□□□□ -0.3
NFKB1-202ENST00000394820 LTB4R2Q9NPC1 389 aa13.18□□□□□ -0.3
NFKB1-202ENST00000394820 PRDM8Q9NQV8 689 aa13.18□□□□□ -0.3
NFKB1-202ENST00000394820 ADAM28Q9UKQ2 775 aa13.18□□□□□ -0.3
NFKB1-202ENST00000394820 SLC30A1Q9Y6M5 507 aa13.18□□□□□ -0.3
NFKB1-202ENST00000394820 LCTP09848 1927 aa13.18□□□□□ -0.3
NFKB1-202ENST00000394820 TRIP12Q14669 1992 aaPredicted RBP13.17□□□□□ -0.3
NFKB1-202ENST00000394820 C16orf96A6NNT2 1141 aa13.17□□□□□ -0.3
NFKB1-202ENST00000394820 CBX4O00257 560 aa13.17□□□□□ -0.3
NFKB1-202ENST00000394820 PAGE1O75459 146 aa13.17□□□□□ -0.3
NFKB1-202ENST00000394820 SLC2A3P11169 496 aa13.17□□□□□ -0.3
NFKB1-202ENST00000394820 PCSK1P29120 753 aa13.17□□□□□ -0.3
NFKB1-202ENST00000394820 OXTRP30559 389 aa13.17□□□□□ -0.3
NFKB1-202ENST00000394820 SULT2A1Q06520 285 aa13.17□□□□□ -0.3
NFKB1-202ENST00000394820 TSNQ15631 228 aaKnown RBP13.17□□□□□ -0.3
NFKB1-202ENST00000394820 ERI1Q8IV48 349 aaKnown RBP13.17□□□□□ -0.3
NFKB1-202ENST00000394820 LZTR1Q8N653 840 aa13.17□□□□□ -0.3
NFKB1-202ENST00000394820 CNTD1Q8N815 330 aa13.17□□□□□ -0.3
NFKB1-202ENST00000394820 OR13C4Q8NGS5 318 aa13.17□□□□□ -0.3
NFKB1-202ENST00000394820 PLEKHA8Q96JA3 519 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms