RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 TLR10Q9BXR5 811 aa7.63□□□□□ -1.19
HMGB3P1-201ENST00000393368 FRMD8Q9BZ67 464 aaPredicted RBP7.63□□□□□ -1.19
HMGB3P1-201ENST00000393368 GPR63Q9BZJ6 419 aa7.63□□□□□ -1.19
HMGB3P1-201ENST00000393368 FAM83DQ9H4H8 585 aa7.63□□□□□ -1.19
HMGB3P1-201ENST00000393368 PIH1D1Q9NWS0 290 aaKnown RBP7.63□□□□□ -1.19
HMGB3P1-201ENST00000393368 TRMT1Q9NXH9 659 aaKnown RBP7.63□□□□□ -1.19
HMGB3P1-201ENST00000393368 PKD2L2Q9NZM6 624 aa7.63□□□□□ -1.19
HMGB3P1-201ENST00000393368 GULP1Q9UBP9 304 aa7.63□□□□□ -1.19
HMGB3P1-201ENST00000393368 TRHDEQ9UKU6 1024 aa7.63□□□□□ -1.19
HMGB3P1-201ENST00000393368 CNOT6Q9ULM6 557 aaKnown RBP7.63□□□□□ -1.19
HMGB3P1-201ENST00000393368 SUFUQ9UMX1 484 aa7.63□□□□□ -1.19
HMGB3P1-201ENST00000393368 DOLKQ9UPQ8 538 aa7.63□□□□□ -1.19
HMGB3P1-201ENST00000393368 ST14Q9Y5Y6 855 aa7.63□□□□□ -1.19
HMGB3P1-201ENST00000393368 ZFHX4Q86UP3 3567 aa7.63□□□□□ -1.19
HMGB3P1-201ENST00000393368 FREM2Q5SZK8 3169 aa7.63□□□□□ -1.19
HMGB3P1-201ENST00000393368 COL5A1P20908 1838 aaPredicted RBP7.62□□□□□ -1.19
HMGB3P1-201ENST00000393368 CPED1A4D0V7 1026 aa7.62□□□□□ -1.19
HMGB3P1-201ENST00000393368 USP27XA6NNY8 438 aa7.62□□□□□ -1.19
HMGB3P1-201ENST00000393368 LMO7DNF2Z398 122 aa7.62□□□□□ -1.19
HMGB3P1-201ENST00000393368 LIASO43766 372 aa7.62□□□□□ -1.19
HMGB3P1-201ENST00000393368 NRDCO43847 1150 aa7.62□□□□□ -1.19
HMGB3P1-201ENST00000393368 MTX2O75431 263 aa7.62□□□□□ -1.19
HMGB3P1-201ENST00000393368 STK10O94804 968 aaKnown RBP7.62□□□□□ -1.19
HMGB3P1-201ENST00000393368 TRIM16O95361 564 aa7.62□□□□□ -1.19
HMGB3P1-201ENST00000393368 HOXC4P09017 264 aaPredicted RBP7.62□□□□□ -1.19
HMGB3P1-201ENST00000393368 CKMT1AP12532 417 aa7.62□□□□□ -1.19
HMGB3P1-201ENST00000393368 BPIP17213 487 aa7.62□□□□□ -1.19
HMGB3P1-201ENST00000393368 KELP23276 732 aa7.62□□□□□ -1.19
HMGB3P1-201ENST00000393368 ACP1P24666 158 aa7.62□□□□□ -1.19
HMGB3P1-201ENST00000393368 CA5AP35218 305 aa7.62□□□□□ -1.19
HMGB3P1-201ENST00000393368 ADRA1AP35348 466 aa7.62□□□□□ -1.19
HMGB3P1-201ENST00000393368 BLKP51451 505 aa7.62□□□□□ -1.19
HMGB3P1-201ENST00000393368 GEMP55040 296 aa7.62□□□□□ -1.19
HMGB3P1-201ENST00000393368 INSM1Q01101 510 aaPredicted RBP7.62□□□□□ -1.19
HMGB3P1-201ENST00000393368 MPP3Q13368 585 aa7.62□□□□□ -1.19
HMGB3P1-201ENST00000393368 ELOCQ15369 112 aa7.62□□□□□ -1.19
HMGB3P1-201ENST00000393368 NR0B2Q15466 257 aa7.62□□□□□ -1.19
HMGB3P1-201ENST00000393368 SIX1Q15475 284 aaPredicted RBP7.62□□□□□ -1.19
HMGB3P1-201ENST00000393368 PERM1Q5SV97 790 aa7.62□□□□□ -1.19
HMGB3P1-201ENST00000393368 C6orf132Q5T0Z8 1188 aa7.62□□□□□ -1.19
HMGB3P1-201ENST00000393368 HENMT1Q5T8I9 393 aaKnown RBP7.62□□□□□ -1.19
HMGB3P1-201ENST00000393368 HES3Q5TGS1 186 aa7.62□□□□□ -1.19
HMGB3P1-201ENST00000393368 CCDC70Q6NSX1 233 aa7.62□□□□□ -1.19
HMGB3P1-201ENST00000393368 ZCCHC8Q6NZY4 707 aaKnown RBP7.62□□□□□ -1.19
HMGB3P1-201ENST00000393368 SLC30A9Q6PML9 568 aa7.62□□□□□ -1.19
HMGB3P1-201ENST00000393368 ZNF662Q6ZS27 426 aa7.62□□□□□ -1.19
HMGB3P1-201ENST00000393368 ARHGEF18Q6ZSZ5 1173 aa7.62□□□□□ -1.19
HMGB3P1-201ENST00000393368 ZNF765Q7L2R6 523 aa7.62□□□□□ -1.19
HMGB3P1-201ENST00000393368 GLT6D1Q7Z4J2 308 aa7.62□□□□□ -1.19
HMGB3P1-201ENST00000393368 TAF8Q7Z7C8 310 aa7.62□□□□□ -1.19
HMGB3P1-201ENST00000393368 NRROSQ86YC3 692 aa7.62□□□□□ -1.19
HMGB3P1-201ENST00000393368 REXO1L1PQ8IX06 675 aa7.62□□□□□ -1.19
HMGB3P1-201ENST00000393368 NRSN1Q8IZ57 195 aa7.62□□□□□ -1.19
HMGB3P1-201ENST00000393368 FSTL5Q8N475 847 aaPredicted RBP7.62□□□□□ -1.19
HMGB3P1-201ENST00000393368 TTC30BQ8N4P2 665 aa7.62□□□□□ -1.19
HMGB3P1-201ENST00000393368 GLIS1Q8NBF1 620 aa7.62□□□□□ -1.19
HMGB3P1-201ENST00000393368 FAM46DQ8NEK8 389 aa7.62□□□□□ -1.19
HMGB3P1-201ENST00000393368 ATL2Q8NHH9 583 aa7.62□□□□□ -1.19
HMGB3P1-201ENST00000393368 IFI44Q8TCB0 444 aa7.62□□□□□ -1.19
HMGB3P1-201ENST00000393368 CCHCR1Q8TD31 782 aa7.62□□□□□ -1.19
HMGB3P1-201ENST00000393368 NAT14Q8WUY8 206 aa7.62□□□□□ -1.19
HMGB3P1-201ENST00000393368 GATA6Q92908 595 aa7.62□□□□□ -1.19
HMGB3P1-201ENST00000393368 COX14Q96I36 57 aa7.62□□□□□ -1.19
HMGB3P1-201ENST00000393368 HIC2Q96JB3 615 aa7.62□□□□□ -1.19
HMGB3P1-201ENST00000393368 DUSP23Q9BVJ7 150 aa7.62□□□□□ -1.19
HMGB3P1-201ENST00000393368 BOCQ9BWV1 1114 aa7.62□□□□□ -1.19
HMGB3P1-201ENST00000393368 SPATA16Q9BXB7 569 aa7.62□□□□□ -1.19
HMGB3P1-201ENST00000393368 SYNDIG1Q9H7V2 258 aa7.62□□□□□ -1.19
HMGB3P1-201ENST00000393368 MAGEE1Q9HCI5 957 aa7.62□□□□□ -1.19
HMGB3P1-201ENST00000393368 SPATS2LQ9NUQ6 558 aaKnown RBP7.62□□□□□ -1.19
HMGB3P1-201ENST00000393368 SMARCAL1Q9NZC9 954 aa7.62□□□□□ -1.19
HMGB3P1-201ENST00000393368 RABGEF1Q9UJ41 708 aa7.62□□□□□ -1.19
HMGB3P1-201ENST00000393368 GPR34Q9UPC5 381 aa7.62□□□□□ -1.19
HMGB3P1-201ENST00000393368 SLC17A4Q9Y2C5 497 aa7.62□□□□□ -1.19
HMGB3P1-201ENST00000393368 GPSM3Q9Y4H4 160 aa7.62□□□□□ -1.19
HMGB3P1-201ENST00000393368 NEUROG3Q9Y4Z2 214 aa7.62□□□□□ -1.19
HMGB3P1-201ENST00000393368 KCTD3Q9Y597 815 aa7.62□□□□□ -1.19
HMGB3P1-201ENST00000393368 ARL5AQ9Y689 179 aa7.62□□□□□ -1.19
HMGB3P1-201ENST00000393368 CSNK1G3Q9Y6M4 447 aa7.62□□□□□ -1.19
HMGB3P1-201ENST00000393368 DGKBQ9Y6T7 804 aa7.62□□□□□ -1.19
HMGB3P1-201ENST00000393368 CEP295Q9C0D2 2601 aa7.62□□□□□ -1.19
HMGB3P1-201ENST00000393368 CNOT1A5YKK6 2376 aaKnown RBP7.61□□□□□ -1.19
HMGB3P1-201ENST00000393368 LRP4O75096 1905 aa7.61□□□□□ -1.19
HMGB3P1-201ENST00000393368 C5orf60A6NFR6 353 aa7.61□□□□□ -1.19
HMGB3P1-201ENST00000393368 CCL22O00626 93 aa7.61□□□□□ -1.19
HMGB3P1-201ENST00000393368 TNFRSF10CO14798 259 aa7.61□□□□□ -1.19
HMGB3P1-201ENST00000393368 CEP104O60308 925 aa7.61□□□□□ -1.19
HMGB3P1-201ENST00000393368 ANXA9O76027 345 aa7.61□□□□□ -1.19
HMGB3P1-201ENST00000393368 IFNB1P01574 187 aa7.61□□□□□ -1.19
HMGB3P1-201ENST00000393368 FGGP02679 453 aa7.61□□□□□ -1.19
HMGB3P1-201ENST00000393368 FGF1P05230 155 aa7.61□□□□□ -1.19
HMGB3P1-201ENST00000393368 ZSCAN5DPP0CG00 497 aa7.61□□□□□ -1.19
HMGB3P1-201ENST00000393368 TPH1P17752 444 aa7.61□□□□□ -1.19
HMGB3P1-201ENST00000393368 HLA-DPA1P20036 260 aa7.61□□□□□ -1.19
HMGB3P1-201ENST00000393368 TEAD1P28347 426 aa7.61□□□□□ -1.19
HMGB3P1-201ENST00000393368 ADCY8P40145 1251 aa7.61□□□□□ -1.19
HMGB3P1-201ENST00000393368 TNNT3P45378 269 aaPredicted RBP7.61□□□□□ -1.19
HMGB3P1-201ENST00000393368 MAZP56270 477 aaKnown RBP7.61□□□□□ -1.19
HMGB3P1-201ENST00000393368 TMPRSS15P98073 1019 aa7.61□□□□□ -1.19
HMGB3P1-201ENST00000393368 CTBSQ01459 385 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms