RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 RPL24P83731 157 aaKnown RBP3.18□□□□□ -1.9
TRAV40-201ENST00000390467 CAMK1Q14012 370 aa3.18□□□□□ -1.9
TRAV40-201ENST00000390467 GPR68Q15743 365 aa3.18□□□□□ -1.9
TRAV40-201ENST00000390467 TAF12Q16514 161 aa3.18□□□□□ -1.9
TRAV40-201ENST00000390467 PDSS1Q5T2R2 415 aa3.18□□□□□ -1.9
TRAV40-201ENST00000390467 LCE3CQ5T5A8 94 aa3.18□□□□□ -1.9
TRAV40-201ENST00000390467 FRG2Q64ET8 278 aa3.18□□□□□ -1.9
TRAV40-201ENST00000390467 FAM171BQ6P995 826 aa3.18□□□□□ -1.9
TRAV40-201ENST00000390467 CYP26C1Q6V0L0 522 aa3.18□□□□□ -1.9
TRAV40-201ENST00000390467 DGLUCYQ7Z3D6 616 aa3.18□□□□□ -1.9
TRAV40-201ENST00000390467 CCDC13Q8IYE1 715 aa3.18□□□□□ -1.9
TRAV40-201ENST00000390467 SRBD1Q8N5C6 995 aaKnown RBP3.18□□□□□ -1.9
TRAV40-201ENST00000390467 CADM4Q8NFZ8 388 aa3.18□□□□□ -1.9
TRAV40-201ENST00000390467 ZCCHC10Q8TBK6 192 aa3.18□□□□□ -1.9
TRAV40-201ENST00000390467 NOC3LQ8WTT2 800 aaKnown RBP3.18□□□□□ -1.9
TRAV40-201ENST00000390467 TRIM63Q969Q1 353 aa3.18□□□□□ -1.9
TRAV40-201ENST00000390467 APOPT1Q96IL0 206 aa3.18□□□□□ -1.9
TRAV40-201ENST00000390467 ST6GAL2Q96JF0 529 aa3.18□□□□□ -1.9
TRAV40-201ENST00000390467 ZNF354BQ96LW1 612 aa3.18□□□□□ -1.9
TRAV40-201ENST00000390467 SLC25A18Q9H1K4 315 aa3.18□□□□□ -1.9
TRAV40-201ENST00000390467 SLC6A13Q9NSD5 602 aa3.18□□□□□ -1.9
TRAV40-201ENST00000390467 ACSS1Q9NUB1 689 aaPredicted RBP3.18□□□□□ -1.9
TRAV40-201ENST00000390467 MPP6Q9NZW5 540 aa3.18□□□□□ -1.9
TRAV40-201ENST00000390467 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.18□□□□□ -1.9
TRAV40-201ENST00000390467 SARDHQ9UL12 918 aa3.18□□□□□ -1.9
TRAV40-201ENST00000390467 DGKBQ9Y6T7 804 aa3.18□□□□□ -1.9
TRAV40-201ENST00000390467 SMCHD1A6NHR9 2005 aa3.17□□□□□ -1.9
TRAV40-201ENST00000390467 IFRD1O00458 451 aaPredicted RBP3.17□□□□□ -1.9
TRAV40-201ENST00000390467 ZNHIT1O43257 154 aa3.17□□□□□ -1.9
TRAV40-201ENST00000390467 SPINT2O43291 252 aa3.17□□□□□ -1.9
TRAV40-201ENST00000390467 IGHV4-39P01824 125 aa3.17□□□□□ -1.9
TRAV40-201ENST00000390467 TUBBP07437 444 aa3.17□□□□□ -1.9
TRAV40-201ENST00000390467 HOXB5P09067 269 aa3.17□□□□□ -1.9
TRAV40-201ENST00000390467 POLR2CP19387 275 aaPredicted RBP3.17□□□□□ -1.9
TRAV40-201ENST00000390467 HOXA1P49639 335 aaPredicted RBP3.17□□□□□ -1.9
TRAV40-201ENST00000390467 TAF6P49848 677 aa3.17□□□□□ -1.9
TRAV40-201ENST00000390467 CLDN20P56880 219 aa3.17□□□□□ -1.9
TRAV40-201ENST00000390467 TUBB4BP68371 445 aa3.17□□□□□ -1.9
TRAV40-201ENST00000390467 TLE2Q04725 743 aa3.17□□□□□ -1.9
TRAV40-201ENST00000390467 FOXM1Q08050 763 aa3.17□□□□□ -1.9
TRAV40-201ENST00000390467 ZNF876PQ49A33 203 aa3.17□□□□□ -1.9
TRAV40-201ENST00000390467 OR7E24Q6IFN5 339 aa3.17□□□□□ -1.9
TRAV40-201ENST00000390467 CEACAM20Q6UY09 585 aa3.17□□□□□ -1.9
TRAV40-201ENST00000390467 DPPA4Q7L190 304 aa3.17□□□□□ -1.9
TRAV40-201ENST00000390467 ZNF485Q8NCK3 441 aa3.17□□□□□ -1.9
TRAV40-201ENST00000390467 SLC44A1Q8WWI5 657 aa3.17□□□□□ -1.9
TRAV40-201ENST00000390467 LGALS12Q96DT0 336 aa3.17□□□□□ -1.9
TRAV40-201ENST00000390467 LINGO1Q96FE5 620 aa3.17□□□□□ -1.9
TRAV40-201ENST00000390467 C17orf77Q96MU5 243 aa3.17□□□□□ -1.9
TRAV40-201ENST00000390467 NEUROD6Q96NK8 337 aa3.17□□□□□ -1.9
TRAV40-201ENST00000390467 QRFPRQ96P65 431 aa3.17□□□□□ -1.9
TRAV40-201ENST00000390467 FKRPQ9H9S5 495 aa3.17□□□□□ -1.9
TRAV40-201ENST00000390467 BRF2Q9HAW0 419 aa3.17□□□□□ -1.9
TRAV40-201ENST00000390467 KCND2Q9NZV8 630 aa3.17□□□□□ -1.9
TRAV40-201ENST00000390467 ACSL5Q9ULC5 683 aa3.17□□□□□ -1.9
TRAV40-201ENST00000390467 TBX20Q9UMR3 447 aa3.17□□□□□ -1.9
TRAV40-201ENST00000390467 AAR2Q9Y312 384 aaKnown RBP3.17□□□□□ -1.9
TRAV40-201ENST00000390467 ZCWPW2A0A1B0GU75 182 aa3.16□□□□□ -1.9
TRAV40-201ENST00000390467 USP17L23D6RBM5 183 aa3.16□□□□□ -1.9
TRAV40-201ENST00000390467 FAM106CPP0CH98 169 aa3.16□□□□□ -1.9
TRAV40-201ENST00000390467 ABCD1P33897 745 aa3.16□□□□□ -1.9
TRAV40-201ENST00000390467 FASLGP48023 281 aa3.16□□□□□ -1.9
TRAV40-201ENST00000390467 DECR1Q16698 335 aa3.16□□□□□ -1.9
TRAV40-201ENST00000390467 USP41Q3LFD5 358 aa3.16□□□□□ -1.9
TRAV40-201ENST00000390467 CXorf66Q5JRM2 361 aaPredicted RBP3.16□□□□□ -1.9
TRAV40-201ENST00000390467 C6orf141Q5SZD1 244 aa3.16□□□□□ -1.9
TRAV40-201ENST00000390467 CCNYL2Q5T2Q4 361 aa3.16□□□□□ -1.9
TRAV40-201ENST00000390467 SLC9C2Q5TAH2 1124 aa3.16□□□□□ -1.9
TRAV40-201ENST00000390467 SLC35E4Q6ICL7 350 aa3.16□□□□□ -1.9
TRAV40-201ENST00000390467 KRTAP5-1Q6L8H4 278 aa3.16□□□□□ -1.9
TRAV40-201ENST00000390467 ATG9AQ7Z3C6 839 aa3.16□□□□□ -1.9
TRAV40-201ENST00000390467 CNBD1Q8NA66 436 aa3.16□□□□□ -1.9
TRAV40-201ENST00000390467 HTRA1Q92743 480 aa3.16□□□□□ -1.9
TRAV40-201ENST00000390467 APBB2Q92870 758 aa3.16□□□□□ -1.9
TRAV40-201ENST00000390467 TAAR8Q969N4 342 aa3.16□□□□□ -1.9
TRAV40-201ENST00000390467 ACOX2Q99424 681 aa3.16□□□□□ -1.9
TRAV40-201ENST00000390467 EIF2AK1Q9BQI3 630 aaKnown RBP3.16□□□□□ -1.9
TRAV40-201ENST00000390467 TMEM47Q9BQJ4 181 aa3.16□□□□□ -1.9
TRAV40-201ENST00000390467 NEURL2Q9BR09 285 aa3.16□□□□□ -1.9
TRAV40-201ENST00000390467 FSD1Q9BTV5 496 aa3.16□□□□□ -1.9
TRAV40-201ENST00000390467 TFB2MQ9H5Q4 396 aaKnown RBP3.16□□□□□ -1.9
TRAV40-201ENST00000390467 FAM118AQ9NWS6 357 aa3.16□□□□□ -1.9
TRAV40-201ENST00000390467 PPP1R14DQ9NXH3 145 aa3.16□□□□□ -1.9
TRAV40-201ENST00000390467 SAGE1Q9NXZ1 904 aa3.16□□□□□ -1.9
TRAV40-201ENST00000390467 RRN3Q9NYV6 651 aa3.16□□□□□ -1.9
TRAV40-201ENST00000390467 ZNF624Q9P2J8 865 aaPredicted RBP3.16□□□□□ -1.9
TRAV40-201ENST00000390467 MKLN1Q9UL63 735 aa3.16□□□□□ -1.9
TRAV40-201ENST00000390467 KLHL20Q9Y2M5 609 aa3.16□□□□□ -1.9
TRAV40-201ENST00000390467 CAPN7Q9Y6W3 813 aa3.16□□□□□ -1.9
TRAV40-201ENST00000390467 UTYO14607 1347 aa3.16□□□□□ -1.9
TRAV40-201ENST00000390467 KIAA1210Q9ULL0 1709 aa3.16□□□□□ -1.9
TRAV40-201ENST00000390467 IGLV5-45A0A087WSX0 123 aa3.15□□□□□ -1.91
TRAV40-201ENST00000390467 C5orf60A6NFR6 353 aa3.15□□□□□ -1.91
TRAV40-201ENST00000390467 ERI2A8K979 691 aaKnown RBP3.15□□□□□ -1.91
TRAV40-201ENST00000390467 TSPAN4O14817 238 aa3.15□□□□□ -1.91
TRAV40-201ENST00000390467 EIF3DO15371 548 aaKnown RBP eCLIP3.15□□□□□ -1.91
TRAV40-201ENST00000390467 PRKNO60260 465 aaPredicted RBP3.15□□□□□ -1.91
TRAV40-201ENST00000390467 ZNF500O60304 480 aaPredicted RBP3.15□□□□□ -1.91
TRAV40-201ENST00000390467 INHBAP08476 426 aa3.15□□□□□ -1.91
TRAV40-201ENST00000390467 HSD3B1P14060 373 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms