RNA–Protein interactions for RNA: ENST00000376492.3

CLCN6-205, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 1,062 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-205ENST00000376492 CDH19Q9H159 772 aa13.1□□□□□ -0.31
CLCN6-205ENST00000376492 ATP13A3Q9H7F0 1226 aa13.1□□□□□ -0.31
CLCN6-205ENST00000376492 OCIAD1Q9NX40 245 aa13.1□□□□□ -0.31
CLCN6-205ENST00000376492 SLC39A1Q9NY26 324 aa13.1□□□□□ -0.31
CLCN6-205ENST00000376492 CWC15Q9P013 229 aaKnown RBP13.1□□□□□ -0.31
CLCN6-205ENST00000376492 PLAAQ9Y263 795 aa13.1□□□□□ -0.31
CLCN6-205ENST00000376492 USP9XQ93008 2570 aaPredicted RBP13.1□□□□□ -0.31
CLCN6-205ENST00000376492 GOLGA6L9A6NEM1 432 aa13.09□□□□□ -0.31
CLCN6-205ENST00000376492 ZNF891A8MT65 544 aaPredicted RBP13.09□□□□□ -0.31
CLCN6-205ENST00000376492 PPM1DO15297 605 aa13.09□□□□□ -0.31
CLCN6-205ENST00000376492 DAPK3O43293 454 aa13.09□□□□□ -0.31
CLCN6-205ENST00000376492 MTA2O94776 668 aa13.09□□□□□ -0.31
CLCN6-205ENST00000376492 LCA5LO95447 670 aa13.09□□□□□ -0.31
CLCN6-205ENST00000376492 CEACAM5P06731 702 aa13.09□□□□□ -0.31
CLCN6-205ENST00000376492 ERCC2P18074 760 aa13.09□□□□□ -0.31
CLCN6-205ENST00000376492 CSTF2P33240 577 aaKnown RBP eCLIP13.09□□□□□ -0.31
CLCN6-205ENST00000376492 CYLC1P35663 651 aaPredicted RBP13.09□□□□□ -0.31
CLCN6-205ENST00000376492 ARHGAP25P42331 645 aa13.09□□□□□ -0.31
CLCN6-205ENST00000376492 ILF3Q12906 894 aaKnown RBP eCLIP13.09□□□□□ -0.31
CLCN6-205ENST00000376492 BIRC2Q13490 618 aa13.09□□□□□ -0.31
CLCN6-205ENST00000376492 DPYSQ14117 519 aa13.09□□□□□ -0.31
CLCN6-205ENST00000376492 CLPPQ16740 277 aaPredicted RBP13.09□□□□□ -0.31
CLCN6-205ENST00000376492 HADHQ16836 314 aaKnown RBP13.09□□□□□ -0.31
CLCN6-205ENST00000376492 PPP6R3Q5H9R7 873 aaPredicted RBP13.09□□□□□ -0.31
CLCN6-205ENST00000376492 ANKS6Q68DC2 871 aa13.09□□□□□ -0.31
CLCN6-205ENST00000376492 TXNRD3NBQ6F5E7 133 aa13.09□□□□□ -0.31
CLCN6-205ENST00000376492 POLNQ7Z5Q5 900 aa13.09□□□□□ -0.31
CLCN6-205ENST00000376492 ZNF761Q86XN6 746 aaPredicted RBP13.09□□□□□ -0.31
CLCN6-205ENST00000376492 FAM129CQ86XR2 697 aa13.09□□□□□ -0.31
CLCN6-205ENST00000376492 UNC5BQ8IZJ1 945 aa13.09□□□□□ -0.31
CLCN6-205ENST00000376492 NAGSQ8N159 534 aa13.09□□□□□ -0.31
CLCN6-205ENST00000376492 PAF1Q8N7H5 531 aa13.09□□□□□ -0.31
CLCN6-205ENST00000376492 AGBL5Q8NDL9 886 aa13.09□□□□□ -0.31
CLCN6-205ENST00000376492 OR4D9Q8NGE8 314 aa13.09□□□□□ -0.31
CLCN6-205ENST00000376492 FAM71BQ8TC56 605 aa13.09□□□□□ -0.31
CLCN6-205ENST00000376492 NUS1Q96E22 293 aa13.09□□□□□ -0.31
CLCN6-205ENST00000376492 COQ10AQ96MF6 247 aa13.09□□□□□ -0.31
CLCN6-205ENST00000376492 KCNF1Q9H3M0 494 aa13.09□□□□□ -0.31
CLCN6-205ENST00000376492 ZWILCHQ9H900 591 aa13.09□□□□□ -0.31
CLCN6-205ENST00000376492 B4GALT6Q9UBX8 382 aa13.09□□□□□ -0.31
CLCN6-205ENST00000376492 ANAPC2Q9UJX6 822 aa13.09□□□□□ -0.31
CLCN6-205ENST00000376492 SUFUQ9UMX1 484 aa13.09□□□□□ -0.31
CLCN6-205ENST00000376492 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.09□□□□□ -0.31
CLCN6-205ENST00000376492 NOTCH2Q04721 2471 aa13.08□□□□□ -0.31
CLCN6-205ENST00000376492 NBPF19A0A087WUL8 3843 aa13.08□□□□□ -0.32
CLCN6-205ENST00000376492 UTP20O75691 2785 aaKnown RBP13.08□□□□□ -0.32
CLCN6-205ENST00000376492 IGHV1OR21-1A0A087WYE8 117 aa13.08□□□□□ -0.32
CLCN6-205ENST00000376492 TTC24A2A3L6 582 aaPredicted RBP13.08□□□□□ -0.32
CLCN6-205ENST00000376492 EFCAB7A8K855 629 aa13.08□□□□□ -0.32
CLCN6-205ENST00000376492 H3BRJ5 948 aa13.08□□□□□ -0.32
CLCN6-205ENST00000376492 TRAFD1O14545 582 aaPredicted RBP13.08□□□□□ -0.32
CLCN6-205ENST00000376492 ZSCAN12O43309 604 aa13.08□□□□□ -0.32
CLCN6-205ENST00000376492 PALMO75781 387 aa13.08□□□□□ -0.32
CLCN6-205ENST00000376492 MAN1A1P33908 653 aa13.08□□□□□ -0.32
CLCN6-205ENST00000376492 GPR3P46089 330 aa13.08□□□□□ -0.32
CLCN6-205ENST00000376492 POLD2P49005 469 aa13.08□□□□□ -0.32
CLCN6-205ENST00000376492 PAPOLAP51003 745 aaKnown RBP13.08□□□□□ -0.32
CLCN6-205ENST00000376492 BCL2L1Q07817 233 aa13.08□□□□□ -0.32
CLCN6-205ENST00000376492 CDC20Q12834 499 aa13.08□□□□□ -0.32
CLCN6-205ENST00000376492 TRA2AQ13595 282 aaKnown RBP eCLIP13.08□□□□□ -0.32
CLCN6-205ENST00000376492 CNGA3Q16281 694 aa13.08□□□□□ -0.32
CLCN6-205ENST00000376492 SMTNL2Q2TAL5 461 aa13.08□□□□□ -0.32
CLCN6-205ENST00000376492 ATP1A1-AS1Q5TC04 95 aa13.08□□□□□ -0.32
CLCN6-205ENST00000376492 HIST2H2BCQ6DN03 193 aa13.08□□□□□ -0.32
CLCN6-205ENST00000376492 ARHGAP36Q6ZRI8 547 aa13.08□□□□□ -0.32
CLCN6-205ENST00000376492 RHOT2Q8IXI1 618 aa13.08□□□□□ -0.32
CLCN6-205ENST00000376492 NRSN1Q8IZ57 195 aa13.08□□□□□ -0.32
CLCN6-205ENST00000376492 LZTR1Q8N653 840 aa13.08□□□□□ -0.32
CLCN6-205ENST00000376492 HSPH1Q92598 858 aa13.08□□□□□ -0.32
CLCN6-205ENST00000376492 SLC45A3Q96JT2 553 aa13.08□□□□□ -0.32
CLCN6-205ENST00000376492 CATSPER2Q96P56 530 aa13.08□□□□□ -0.32
CLCN6-205ENST00000376492 PSMG3-AS1Q96PY0 264 aa13.08□□□□□ -0.32
CLCN6-205ENST00000376492 CTRCQ99895 268 aa13.08□□□□□ -0.32
CLCN6-205ENST00000376492 CINPQ9BW66 212 aaPredicted RBP13.08□□□□□ -0.32
CLCN6-205ENST00000376492 FRMD8Q9BZ67 464 aaPredicted RBP13.08□□□□□ -0.32
CLCN6-205ENST00000376492 SLC39A8Q9C0K1 460 aa13.08□□□□□ -0.32
CLCN6-205ENST00000376492 ZMYND15Q9H091 742 aa13.08□□□□□ -0.32
CLCN6-205ENST00000376492 LUC7LQ9NQ29 371 aaKnown RBP13.08□□□□□ -0.32
CLCN6-205ENST00000376492 PHPT1Q9NRX4 125 aaPredicted RBP13.08□□□□□ -0.32
CLCN6-205ENST00000376492 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.08□□□□□ -0.32
CLCN6-205ENST00000376492 PILRAQ9UKJ1 303 aa13.08□□□□□ -0.32
CLCN6-205ENST00000376492 PLEKHM1Q9Y4G2 1056 aa13.08□□□□□ -0.32
CLCN6-205ENST00000376492 SPTAN1Q13813 2472 aaKnown RBP13.08□□□□□ -0.32
CLCN6-205ENST00000376492 BLACEA4D250 179 aa13.07□□□□□ -0.32
CLCN6-205ENST00000376492 PDE2AO00408 941 aaPredicted RBP13.07□□□□□ -0.32
CLCN6-205ENST00000376492 IPO7O95373 1038 aaKnown RBP13.07□□□□□ -0.32
CLCN6-205ENST00000376492 IL4RP24394 825 aa13.07□□□□□ -0.32
CLCN6-205ENST00000376492 MSNP26038 577 aaKnown RBP13.07□□□□□ -0.32
CLCN6-205ENST00000376492 OAS2P29728 719 aaKnown RBP13.07□□□□□ -0.32
CLCN6-205ENST00000376492 ARL4AP40617 200 aa13.07□□□□□ -0.32
CLCN6-205ENST00000376492 ETV3P41162 512 aa13.07□□□□□ -0.32
CLCN6-205ENST00000376492 MAGEA1P43355 309 aa13.07□□□□□ -0.32
CLCN6-205ENST00000376492 CSNK1DP48730 415 aa13.07□□□□□ -0.32
CLCN6-205ENST00000376492 ARSEP51690 589 aa13.07□□□□□ -0.32
CLCN6-205ENST00000376492 CDK3Q00526 305 aa13.07□□□□□ -0.32
CLCN6-205ENST00000376492 CTBSQ01459 385 aa13.07□□□□□ -0.32
CLCN6-205ENST00000376492 PTPRRQ15256 657 aa13.07□□□□□ -0.32
CLCN6-205ENST00000376492 SNAP47Q5SQN1 464 aa13.07□□□□□ -0.32
CLCN6-205ENST00000376492 DCAF12Q5T6F0 453 aa13.07□□□□□ -0.32
CLCN6-205ENST00000376492 DENND2CQ68D51 928 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms