RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 RAD54BQ9Y620 910 aa12.9□□□□□ -0.34
MSH5-204ENST00000375755 CCDC78A2IDD5 438 aa12.9□□□□□ -0.34
MSH5-204ENST00000375755 A8MU76 341 aa12.9□□□□□ -0.34
MSH5-204ENST00000375755 HHLA1C9JL84 531 aa12.9□□□□□ -0.34
MSH5-204ENST00000375755 ZNF623O75123 536 aa12.9□□□□□ -0.34
MSH5-204ENST00000375755 MBL2P11226 248 aaPredicted RBP12.9□□□□□ -0.34
MSH5-204ENST00000375755 NCAM1P13591 858 aa12.9□□□□□ -0.34
MSH5-204ENST00000375755 EEF1B2P24534 225 aaKnown RBP12.9□□□□□ -0.34
MSH5-204ENST00000375755 ELK4P28324 431 aa12.9□□□□□ -0.34
MSH5-204ENST00000375755 IFITM3Q01628 133 aa12.9□□□□□ -0.34
MSH5-204ENST00000375755 SPCS2Q15005 226 aa12.9□□□□□ -0.34
MSH5-204ENST00000375755 CCNYL2Q5T2Q4 361 aa12.9□□□□□ -0.34
MSH5-204ENST00000375755 XAF1Q6GPH4 301 aa12.9□□□□□ -0.34
MSH5-204ENST00000375755 USP51Q70EK9 711 aa12.9□□□□□ -0.34
MSH5-204ENST00000375755 RPS27LQ71UM5 84 aaKnown RBP12.9□□□□□ -0.34
MSH5-204ENST00000375755 RETREG3Q86VR2 466 aa12.9□□□□□ -0.34
MSH5-204ENST00000375755 SLC41A1Q8IVJ1 513 aa12.9□□□□□ -0.34
MSH5-204ENST00000375755 SPNS2Q8IVW8 549 aa12.9□□□□□ -0.34
MSH5-204ENST00000375755 DDIASQ8IXT1 998 aa12.9□□□□□ -0.34
MSH5-204ENST00000375755 CCNYQ8ND76 341 aa12.9□□□□□ -0.34
MSH5-204ENST00000375755 NUP205Q92621 2012 aa12.9□□□□□ -0.34
MSH5-204ENST00000375755 NXNL1Q96CM4 212 aa12.9□□□□□ -0.34
MSH5-204ENST00000375755 SLC45A3Q96JT2 553 aa12.9□□□□□ -0.34
MSH5-204ENST00000375755 B3GALT6Q96L58 329 aa12.9□□□□□ -0.34
MSH5-204ENST00000375755 NSMCE3Q96MG7 304 aa12.9□□□□□ -0.34
MSH5-204ENST00000375755 SLC25A23Q9BV35 468 aa12.9□□□□□ -0.34
MSH5-204ENST00000375755 SMPD3Q9NY59 655 aaPredicted RBP12.9□□□□□ -0.34
MSH5-204ENST00000375755 NOX1Q9Y5S8 564 aa12.9□□□□□ -0.34
MSH5-204ENST00000375755 NEMP2A6NFY4 417 aa12.9□□□□□ -0.35
MSH5-204ENST00000375755 CLDN25C9JDP6 229 aa12.9□□□□□ -0.35
MSH5-204ENST00000375755 SYNCRIPO60506 623 aaKnown RBP12.9□□□□□ -0.35
MSH5-204ENST00000375755 MT-CO1P00395 513 aa12.9□□□□□ -0.35
MSH5-204ENST00000375755 JUNBP17275 347 aaPredicted RBP12.9□□□□□ -0.35
MSH5-204ENST00000375755 IL10P22301 178 aa12.9□□□□□ -0.35
MSH5-204ENST00000375755 NR4A1P22736 598 aa12.9□□□□□ -0.35
MSH5-204ENST00000375755 YBX1P67809 324 aaKnown RBP12.9□□□□□ -0.35
MSH5-204ENST00000375755 AQP6Q13520 282 aa12.9□□□□□ -0.35
MSH5-204ENST00000375755 SF3B4Q15427 424 aaKnown RBP eCLIP12.9□□□□□ -0.354e-9■■■■□ 20.4
MSH5-204ENST00000375755 GTF2IRD2BQ6EKJ0 949 aa12.9□□□□□ -0.35
MSH5-204ENST00000375755 PID1Q7Z2X4 250 aa12.9□□□□□ -0.35
MSH5-204ENST00000375755 ZNF598Q86UK7 904 aaKnown RBP12.9□□□□□ -0.35
MSH5-204ENST00000375755 GTF2IRD2Q86UP8 949 aa12.9□□□□□ -0.35
MSH5-204ENST00000375755 ZC3HC1Q86WB0 502 aaKnown RBP12.9□□□□□ -0.35
MSH5-204ENST00000375755 ADGRG5Q8IZF4 528 aa12.9□□□□□ -0.35
MSH5-204ENST00000375755 DNAAF3Q8N9W5 541 aa12.9□□□□□ -0.35
MSH5-204ENST00000375755 RAB2BQ8WUD1 216 aa12.9□□□□□ -0.35
MSH5-204ENST00000375755 CFHR5Q9BXR6 569 aa12.9□□□□□ -0.35
MSH5-204ENST00000375755 CHRAC1Q9NRG0 131 aa12.9□□□□□ -0.35
MSH5-204ENST00000375755 TBC1D13Q9NVG8 400 aa12.9□□□□□ -0.35
MSH5-204ENST00000375755 BFARQ9NZS9 450 aa12.9□□□□□ -0.35
MSH5-204ENST00000375755 FRMPD3Q5JV73 1810 aa12.89□□□□□ -0.35
MSH5-204ENST00000375755 AQP12BA6NM10 295 aa12.89□□□□□ -0.35
MSH5-204ENST00000375755 KCNK1O00180 336 aa12.89□□□□□ -0.35
MSH5-204ENST00000375755 NPHS1O60500 1241 aa12.89□□□□□ -0.35
MSH5-204ENST00000375755 ACADSBP45954 432 aa12.89□□□□□ -0.35
MSH5-204ENST00000375755 RAD23AP54725 363 aa12.89□□□□□ -0.35
MSH5-204ENST00000375755 DMPKQ09013 629 aa12.89□□□□□ -0.35
MSH5-204ENST00000375755 PRPSAP1Q14558 356 aa12.89□□□□□ -0.35
MSH5-204ENST00000375755 INPP5AQ14642 412 aa12.89□□□□□ -0.35
MSH5-204ENST00000375755 ZNF846Q147U1 533 aa12.89□□□□□ -0.35
MSH5-204ENST00000375755 CLPPQ16740 277 aaPredicted RBP12.89□□□□□ -0.35
MSH5-204ENST00000375755 TCTN1Q2MV58 587 aa12.89□□□□□ -0.35
MSH5-204ENST00000375755 SLC25A52Q3SY17 297 aa12.89□□□□□ -0.35
MSH5-204ENST00000375755 HACD2Q6Y1H2 254 aa12.89□□□□□ -0.35
MSH5-204ENST00000375755 BHLHA9Q7RTU4 235 aa12.89□□□□□ -0.35
MSH5-204ENST00000375755 AQP12AQ8IXF9 295 aa12.89□□□□□ -0.35
MSH5-204ENST00000375755 MAGEE2Q8TD90 523 aaPredicted RBP12.89□□□□□ -0.35
MSH5-204ENST00000375755 PTCD2Q8WV60 388 aaKnown RBP12.89□□□□□ -0.35
MSH5-204ENST00000375755 SGCDQ92629 289 aa12.89□□□□□ -0.35
MSH5-204ENST00000375755 EFHD2Q96C19 240 aaPredicted RBP12.89□□□□□ -0.35
MSH5-204ENST00000375755 RPL10LQ96L21 214 aaKnown RBP12.89□□□□□ -0.35
MSH5-204ENST00000375755 GPR78Q96P69 363 aa12.89□□□□□ -0.35
MSH5-204ENST00000375755 CTRCQ99895 268 aa12.89□□□□□ -0.35
MSH5-204ENST00000375755 FZD10Q9ULW2 581 aa12.89□□□□□ -0.35
MSH5-204ENST00000375755 GPC4O75487 556 aa12.89□□□□□ -0.35
MSH5-204ENST00000375755 LHX1P48742 406 aa12.89□□□□□ -0.35
MSH5-204ENST00000375755 VEGFBP49765 207 aa12.89□□□□□ -0.35
MSH5-204ENST00000375755 SLC12A1Q13621 1099 aa12.89□□□□□ -0.35
MSH5-204ENST00000375755 PGS1Q32NB8 556 aa12.89□□□□□ -0.35
MSH5-204ENST00000375755 TMTC4Q5T4D3 741 aa12.89□□□□□ -0.35
MSH5-204ENST00000375755 AGAP7PQ5VUJ5 663 aa12.89□□□□□ -0.35
MSH5-204ENST00000375755 SDHAF4Q5VUM1 108 aa12.89□□□□□ -0.35
MSH5-204ENST00000375755 SMYD5Q6GMV2 418 aa12.89□□□□□ -0.35
MSH5-204ENST00000375755 FRA10AC1Q70Z53 315 aa12.89□□□□□ -0.35
MSH5-204ENST00000375755 FUNDC1Q8IVP5 155 aa12.89□□□□□ -0.35
MSH5-204ENST00000375755 MYRFLQ96LU7 910 aa12.89□□□□□ -0.35
MSH5-204ENST00000375755 TSPAN18Q96SJ8 248 aa12.89□□□□□ -0.35
MSH5-204ENST00000375755 APOL2Q9BQE5 337 aa12.89□□□□□ -0.35
MSH5-204ENST00000375755 YTHDF1Q9BYJ9 559 aaKnown RBP12.89□□□□□ -0.35
MSH5-204ENST00000375755 EHD1Q9H4M9 534 aa12.89□□□□□ -0.35
MSH5-204ENST00000375755 PRDM12Q9H4Q4 367 aa12.89□□□□□ -0.35
MSH5-204ENST00000375755 POMKQ9H5K3 350 aa12.89□□□□□ -0.35
MSH5-204ENST00000375755 NUDT5Q9UKK9 219 aa12.89□□□□□ -0.35
MSH5-204ENST00000375755 TPH1P17752 444 aa12.88□□□□□ -0.35
MSH5-204ENST00000375755 PSMA4P25789 261 aaKnown RBP12.88□□□□□ -0.35
MSH5-204ENST00000375755 YWHAQP27348 245 aa12.88□□□□□ -0.35
MSH5-204ENST00000375755 EEF1DP29692 281 aaKnown RBP12.88□□□□□ -0.35
MSH5-204ENST00000375755 RPS9P46781 194 aaKnown RBP12.88□□□□□ -0.35
MSH5-204ENST00000375755 DAOAP59103 153 aa12.88□□□□□ -0.35
MSH5-204ENST00000375755 ADARB1P78563 741 aaKnown RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms