RNA–Protein interactions for RNA: ENST00000374043.6

PACSIN1-202, Transcript of protein kinase C and casein kinase substrate in neurons 1, humanhuman

TSL 1 (best) BASIC

Gene PACSIN1, Length 4,229 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN1-202ENST00000374043 TMEM173Q86WV6 379 aaPredicted RBP11.77□□□□□ -0.52
PACSIN1-202ENST00000374043 OR56A4Q8NGH8 313 aa11.77□□□□□ -0.52
PACSIN1-202ENST00000374043 SORT1Q99523 831 aa11.77□□□□□ -0.52
PACSIN1-202ENST00000374043 C2orf49Q9BVC5 232 aaPredicted RBP11.77□□□□□ -0.52
PACSIN1-202ENST00000374043 SPATA16Q9BXB7 569 aa11.77□□□□□ -0.52
PACSIN1-202ENST00000374043 VCX3AQ9NNX9 186 aa11.77□□□□□ -0.52
PACSIN1-202ENST00000374043 MTF2Q9Y483 593 aaPredicted RBP11.77□□□□□ -0.52
PACSIN1-202ENST00000374043 FOCADQ5VW36 1801 aa11.77□□□□□ -0.53
PACSIN1-202ENST00000374043 CNTRLQ7Z7A1 2325 aa11.77□□□□□ -0.53
PACSIN1-202ENST00000374043 MATN2O00339 956 aa11.77□□□□□ -0.53
PACSIN1-202ENST00000374043 CCL16O15467 120 aa11.77□□□□□ -0.53
PACSIN1-202ENST00000374043 TMCC1O94876 653 aa11.77□□□□□ -0.53
PACSIN1-202ENST00000374043 FKBP9O95302 570 aa11.77□□□□□ -0.53
PACSIN1-202ENST00000374043 GALTP07902 379 aa11.77□□□□□ -0.53
PACSIN1-202ENST00000374043 GDF5P43026 501 aa11.77□□□□□ -0.53
PACSIN1-202ENST00000374043 RPL38P63173 70 aaKnown RBP11.77□□□□□ -0.53
PACSIN1-202ENST00000374043 FKBP9P1Q75LS8 142 aa11.77□□□□□ -0.53
PACSIN1-202ENST00000374043 DNAJB7Q7Z6W7 309 aaPredicted RBP11.77□□□□□ -0.53
PACSIN1-202ENST00000374043 CILP2Q8IUL8 1156 aa11.77□□□□□ -0.53
PACSIN1-202ENST00000374043 FBXO30Q8TB52 745 aa11.77□□□□□ -0.53
PACSIN1-202ENST00000374043 BRSK1Q8TDC3 778 aa11.77□□□□□ -0.53
PACSIN1-202ENST00000374043 VPS9D1Q9Y2B5 631 aa11.77□□□□□ -0.53
PACSIN1-202ENST00000374043 MYOCOSA0A1B0GUC4 107 aa11.77□□□□□ -0.53
PACSIN1-202ENST00000374043 ZNF487B1APH4 448 aa11.77□□□□□ -0.53
PACSIN1-202ENST00000374043 SNNO75324 88 aaPredicted RBP11.77□□□□□ -0.53
PACSIN1-202ENST00000374043 CPSF4O95639 269 aaKnown RBP11.77□□□□□ -0.53
PACSIN1-202ENST00000374043 EFNA1P20827 205 aaPredicted RBP11.77□□□□□ -0.53
PACSIN1-202ENST00000374043 MZF1P28698 734 aaPredicted RBP11.77□□□□□ -0.53
PACSIN1-202ENST00000374043 PRKAA2P54646 552 aa11.77□□□□□ -0.53
PACSIN1-202ENST00000374043 CES4AQ5XG92 561 aa11.77□□□□□ -0.53
PACSIN1-202ENST00000374043 CENPLQ8N0S6 344 aaPredicted RBP11.77□□□□□ -0.53
PACSIN1-202ENST00000374043 HPS4Q9NQG7 708 aa11.77□□□□□ -0.53
PACSIN1-202ENST00000374043 A0A1W2PRU2 124 aa11.76□□□□□ -0.53
PACSIN1-202ENST00000374043 SLC7A4O43246 635 aa11.76□□□□□ -0.53
PACSIN1-202ENST00000374043 SLC25A14O95258 325 aaPredicted RBP11.76□□□□□ -0.53
PACSIN1-202ENST00000374043 PRAMEF1O95521 474 aa11.76□□□□□ -0.53
PACSIN1-202ENST00000374043 CLCQ05315 142 aa11.76□□□□□ -0.53
PACSIN1-202ENST00000374043 AP5B1Q2VPB7 878 aa11.76□□□□□ -0.53
PACSIN1-202ENST00000374043 UGT3A1Q6NUS8 523 aa11.76□□□□□ -0.53
PACSIN1-202ENST00000374043 TTC33Q6PID6 262 aaPredicted RBP11.76□□□□□ -0.53
PACSIN1-202ENST00000374043 STYXQ8WUJ0 223 aa11.76□□□□□ -0.53
PACSIN1-202ENST00000374043 SH3KBP1Q96B97 665 aa11.76□□□□□ -0.53
PACSIN1-202ENST00000374043 UNC93B1Q9H1C4 597 aa11.76□□□□□ -0.53
PACSIN1-202ENST00000374043 ELOVL6Q9H5J4 265 aa11.76□□□□□ -0.53
PACSIN1-202ENST00000374043 STN1Q9H668 368 aaKnown RBP11.76□□□□□ -0.53
PACSIN1-202ENST00000374043 SPAG4Q9NPE6 437 aa11.76□□□□□ -0.53
PACSIN1-202ENST00000374043 TRIP11Q15643 1979 aa11.76□□□□□ -0.53
PACSIN1-202ENST00000374043 E7ENX8 843 aa11.76□□□□□ -0.53
PACSIN1-202ENST00000374043 NEDD8-MDP1E9PL57 170 aa11.76□□□□□ -0.53
PACSIN1-202ENST00000374043 TRAFD1O14545 582 aaPredicted RBP11.76□□□□□ -0.53
PACSIN1-202ENST00000374043 GSNP06396 782 aa11.76□□□□□ -0.53
PACSIN1-202ENST00000374043 AOC1P19801 751 aa11.76□□□□□ -0.53
PACSIN1-202ENST00000374043 CRY1Q16526 586 aa11.76□□□□□ -0.53
PACSIN1-202ENST00000374043 RUBCNLQ9H714 662 aa11.76□□□□□ -0.53
PACSIN1-202ENST00000374043 CREBZFQ9NS37 354 aa11.76□□□□□ -0.53
PACSIN1-202ENST00000374043 ABCB1P08183 1280 aaPredicted RBP11.76□□□□□ -0.53
PACSIN1-202ENST00000374043 COL6A2P12110 1019 aa11.76□□□□□ -0.53
PACSIN1-202ENST00000374043 CKMT2P17540 419 aa11.76□□□□□ -0.53
PACSIN1-202ENST00000374043 CSKP41240 450 aa11.76□□□□□ -0.53
PACSIN1-202ENST00000374043 TTPAP49638 278 aa11.76□□□□□ -0.53
PACSIN1-202ENST00000374043 SQLEQ14534 574 aa11.76□□□□□ -0.53
PACSIN1-202ENST00000374043 ACAP2Q15057 778 aa11.76□□□□□ -0.53
PACSIN1-202ENST00000374043 AP1ARQ63HQ0 302 aa11.76□□□□□ -0.53
PACSIN1-202ENST00000374043 GPRIN3Q6ZVF9 776 aa11.76□□□□□ -0.53
PACSIN1-202ENST00000374043 LYSMD3Q7Z3D4 306 aa11.76□□□□□ -0.53
PACSIN1-202ENST00000374043 ADCK2Q7Z695 626 aa11.76□□□□□ -0.53
PACSIN1-202ENST00000374043 RTN4RL1Q86UN2 441 aaPredicted RBP11.76□□□□□ -0.53
PACSIN1-202ENST00000374043 SLC44A2Q8IWA5 706 aaPredicted RBP11.76□□□□□ -0.53
PACSIN1-202ENST00000374043 ING5Q8WYH8 240 aa11.76□□□□□ -0.53
PACSIN1-202ENST00000374043 LRTOMTQ8WZ04 291 aa11.76□□□□□ -0.53
PACSIN1-202ENST00000374043 PLAC1Q9HBJ0 212 aa11.76□□□□□ -0.53
PACSIN1-202ENST00000374043 COL11A1P12107 1806 aaPredicted RBP11.76□□□□□ -0.53
PACSIN1-202ENST00000374043 A0A088AWK7 358 aa11.75□□□□□ -0.53
PACSIN1-202ENST00000374043 A0A1B0GVM2 712 aa11.75□□□□□ -0.53
PACSIN1-202ENST00000374043 ARHGAP10A1A4S6 786 aa11.75□□□□□ -0.53
PACSIN1-202ENST00000374043 TCAF2A6NFQ2 919 aa11.75□□□□□ -0.53
PACSIN1-202ENST00000374043 HHLA1C9JL84 531 aa11.75□□□□□ -0.53
PACSIN1-202ENST00000374043 COCHO43405 550 aa11.75□□□□□ -0.53
PACSIN1-202ENST00000374043 MAGEA6P43360 314 aa11.75□□□□□ -0.53
PACSIN1-202ENST00000374043 ST8SIA6P61647 398 aa11.75□□□□□ -0.53
PACSIN1-202ENST00000374043 ADAM17P78536 824 aa11.75□□□□□ -0.53
PACSIN1-202ENST00000374043 PPP1R8Q12972 351 aaKnown RBP11.75□□□□□ -0.53
PACSIN1-202ENST00000374043 GPR17Q13304 367 aa11.75□□□□□ -0.53
PACSIN1-202ENST00000374043 TMED1Q13445 227 aa11.75□□□□□ -0.53
PACSIN1-202ENST00000374043 SERINC3Q13530 473 aa11.75□□□□□ -0.53
PACSIN1-202ENST00000374043 SAMD4BQ5PRF9 694 aaKnown RBP11.75□□□□□ -0.53
PACSIN1-202ENST00000374043 PLPP4Q5VZY2 271 aa11.75□□□□□ -0.53
PACSIN1-202ENST00000374043 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.75□□□□□ -0.53
PACSIN1-202ENST00000374043 COLGALT2Q8IYK4 626 aa11.75□□□□□ -0.53
PACSIN1-202ENST00000374043 PYCR2Q96C36 320 aa11.75□□□□□ -0.53
PACSIN1-202ENST00000374043 IL12RB2Q99665 862 aa11.75□□□□□ -0.53
PACSIN1-202ENST00000374043 AKTIPQ9H8T0 292 aa11.75□□□□□ -0.53
PACSIN1-202ENST00000374043 PARVBQ9HBI1 364 aa11.75□□□□□ -0.53
PACSIN1-202ENST00000374043 PAPOLBQ9NRJ5 636 aaKnown RBP11.75□□□□□ -0.53
PACSIN1-202ENST00000374043 OPTCQ9UBM4 332 aa11.75□□□□□ -0.53
PACSIN1-202ENST00000374043 AP4B1Q9Y6B7 739 aa11.75□□□□□ -0.53
PACSIN1-202ENST00000374043 TRIM38O00635 465 aa11.75□□□□□ -0.53
PACSIN1-202ENST00000374043 RAD51BO15315 384 aa11.75□□□□□ -0.53
PACSIN1-202ENST00000374043 FKTNO75072 461 aa11.75□□□□□ -0.53
PACSIN1-202ENST00000374043 CXCL14O95715 111 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms