RNA–Protein interactions for RNA: ENST00000373700.8

HERC4-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERC4, Length 3,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-202ENST00000373700 GPR17Q13304 367 aa7.78□□□□□ -1.16
HERC4-202ENST00000373700 TRIP4Q15650 581 aaPredicted RBP7.78□□□□□ -1.16
HERC4-202ENST00000373700 AP5B1Q2VPB7 878 aa7.78□□□□□ -1.16
HERC4-202ENST00000373700 CPNE9Q8IYJ1 553 aa7.78□□□□□ -1.16
HERC4-202ENST00000373700 C12orf76Q8N812 135 aaPredicted RBP7.78□□□□□ -1.16
HERC4-202ENST00000373700 VPS33AQ96AX1 596 aa7.78□□□□□ -1.16
HERC4-202ENST00000373700 SKA1Q96BD8 255 aa7.78□□□□□ -1.16
HERC4-202ENST00000373700 CDK15Q96Q40 435 aa7.78□□□□□ -1.16
HERC4-202ENST00000373700 RTKNQ9BST9 563 aa7.78□□□□□ -1.16
HERC4-202ENST00000373700 OSGEPL1Q9H4B0 414 aa7.78□□□□□ -1.16
HERC4-202ENST00000373700 EIF2B3Q9NR50 452 aaKnown RBP7.78□□□□□ -1.16
HERC4-202ENST00000373700 OXSMQ9NWU1 459 aa7.78□□□□□ -1.16
HERC4-202ENST00000373700 MTMR10Q9NXD2 777 aa7.78□□□□□ -1.16
HERC4-202ENST00000373700 MOCS1Q9NZB8 636 aa7.78□□□□□ -1.16
HERC4-202ENST00000373700 FKBPLQ9UIM3 349 aa7.78□□□□□ -1.16
HERC4-202ENST00000373700 RAI2Q9Y5P3 530 aa7.78□□□□□ -1.16
HERC4-202ENST00000373700 ARFGEF1Q9Y6D6 1849 aa7.78□□□□□ -1.16
HERC4-202ENST00000373700 TRIOBPQ9H2D6 2365 aa7.78□□□□□ -1.16
HERC4-202ENST00000373700 GNG14A0A1W2PPG7 69 aa7.78□□□□□ -1.16
HERC4-202ENST00000373700 A0A1W2PQ67 120 aa7.78□□□□□ -1.16
HERC4-202ENST00000373700 TCRBV5S1A1TA0A578 114 aa7.78□□□□□ -1.16
HERC4-202ENST00000373700 TP73O15350 636 aa7.78□□□□□ -1.16
HERC4-202ENST00000373700 GABBR2O75899 941 aa7.78□□□□□ -1.16
HERC4-202ENST00000373700 FGF1P05230 155 aa7.78□□□□□ -1.16
HERC4-202ENST00000373700 LYNP07948 512 aa7.78□□□□□ -1.16
HERC4-202ENST00000373700 ACTR3P61158 418 aa7.78□□□□□ -1.16
HERC4-202ENST00000373700 RPL38P63173 70 aaKnown RBP7.78□□□□□ -1.16
HERC4-202ENST00000373700 GALNT2Q10471 571 aa7.78□□□□□ -1.16
HERC4-202ENST00000373700 CDC16Q13042 620 aa7.78□□□□□ -1.16
HERC4-202ENST00000373700 BLMHQ13867 455 aa7.78□□□□□ -1.16
HERC4-202ENST00000373700 STARD3Q14849 445 aa7.78□□□□□ -1.16
HERC4-202ENST00000373700 PAQR3Q6TCH7 311 aa7.78□□□□□ -1.16
HERC4-202ENST00000373700 RD3Q7Z3Z2 195 aa7.78□□□□□ -1.16
HERC4-202ENST00000373700 COLGALT2Q8IYK4 626 aa7.78□□□□□ -1.16
HERC4-202ENST00000373700 ZNF784Q8NCA9 323 aaPredicted RBP7.78□□□□□ -1.16
HERC4-202ENST00000373700 ACVR1CQ8NER5 493 aa7.78□□□□□ -1.16
HERC4-202ENST00000373700 UTP4Q969X6 686 aaKnown RBP7.78□□□□□ -1.16
HERC4-202ENST00000373700 C19orf60Q96EN9 201 aa7.78□□□□□ -1.16
HERC4-202ENST00000373700 FUBP3Q96I24 572 aaKnown RBP eCLIP7.78□□□□□ -1.16
HERC4-202ENST00000373700 FCRL5Q96RD9 977 aa7.78□□□□□ -1.16
HERC4-202ENST00000373700 TSPAN18Q96SJ8 248 aa7.78□□□□□ -1.16
HERC4-202ENST00000373700 PNPLA8Q9NP80 782 aa7.78□□□□□ -1.16
HERC4-202ENST00000373700 VPS45Q9NRW7 570 aa7.78□□□□□ -1.16
HERC4-202ENST00000373700 RHBDL2Q9NX52 303 aa7.78□□□□□ -1.16
HERC4-202ENST00000373700 LNPEPQ9UIQ6 1025 aa7.78□□□□□ -1.16
HERC4-202ENST00000373700 DNAH12Q6ZR08 3092 aa7.78□□□□□ -1.16
HERC4-202ENST00000373700 RP1L1Q8IWN7 2480 aaPredicted RBP7.77□□□□□ -1.16
HERC4-202ENST00000373700 TRIM38O00635 465 aa7.77□□□□□ -1.17
HERC4-202ENST00000373700 RAD51BO15315 384 aa7.77□□□□□ -1.17
HERC4-202ENST00000373700 ZSCAN9O15535 394 aaPredicted RBP7.77□□□□□ -1.17
HERC4-202ENST00000373700 ALPIP09923 528 aa7.77□□□□□ -1.17
HERC4-202ENST00000373700 LAG3P18627 525 aa7.77□□□□□ -1.17
HERC4-202ENST00000373700 SOAT1P35610 550 aa7.77□□□□□ -1.17
HERC4-202ENST00000373700 IRX1P78414 480 aaPredicted RBP7.77□□□□□ -1.17
HERC4-202ENST00000373700 CREB5Q02930 508 aa7.77□□□□□ -1.17
HERC4-202ENST00000373700 DYNC1I2Q13409 638 aaKnown RBP7.77□□□□□ -1.17
HERC4-202ENST00000373700 WLSQ5T9L3 541 aa7.77□□□□□ -1.17
HERC4-202ENST00000373700 EFL1Q7Z2Z2 1120 aaKnown RBP7.77□□□□□ -1.17
HERC4-202ENST00000373700 SCD5Q86SK9 330 aa7.77□□□□□ -1.17
HERC4-202ENST00000373700 CNTD1Q8N815 330 aa7.77□□□□□ -1.17
HERC4-202ENST00000373700 ZNF555Q8NEP9 628 aa7.77□□□□□ -1.17
HERC4-202ENST00000373700 RIN3Q8TB24 985 aa7.77□□□□□ -1.17
HERC4-202ENST00000373700 MYLIPQ8WY64 445 aa7.77□□□□□ -1.17
HERC4-202ENST00000373700 FAM120BQ96EK7 910 aaKnown RBP7.77□□□□□ -1.17
HERC4-202ENST00000373700 ANKRD27Q96NW4 1050 aa7.77□□□□□ -1.17
HERC4-202ENST00000373700 SMIM14Q96QK8 99 aa7.77□□□□□ -1.17
HERC4-202ENST00000373700 CDK5RAP1Q96SZ6 601 aaKnown RBP7.77□□□□□ -1.17
HERC4-202ENST00000373700 SPATA16Q9BXB7 569 aa7.77□□□□□ -1.17
HERC4-202ENST00000373700 C20orf27Q9GZN8 174 aa7.77□□□□□ -1.17
HERC4-202ENST00000373700 DNAJC28Q9NX36 388 aa7.77□□□□□ -1.17
HERC4-202ENST00000373700 SH3BP4Q9P0V3 963 aa7.77□□□□□ -1.17
HERC4-202ENST00000373700 OPTCQ9UBM4 332 aa7.77□□□□□ -1.17
HERC4-202ENST00000373700 TLR6Q9Y2C9 796 aa7.77□□□□□ -1.17
HERC4-202ENST00000373700 U3KQV3 271 aa7.77□□□□□ -1.17
HERC4-202ENST00000373700 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.77□□□□□ -1.17
HERC4-202ENST00000373700 GABRDO14764 452 aa7.77□□□□□ -1.17
HERC4-202ENST00000373700 PIP5K1BO14986 540 aa7.77□□□□□ -1.17
HERC4-202ENST00000373700 DCLK1O15075 740 aa7.77□□□□□ -1.17
HERC4-202ENST00000373700 NIPSNAP2O75323 286 aa7.77□□□□□ -1.17
HERC4-202ENST00000373700 NDST3O95803 873 aa7.77□□□□□ -1.17
HERC4-202ENST00000373700 IL1BP01584 269 aa7.77□□□□□ -1.17
HERC4-202ENST00000373700 GSNP06396 782 aa7.77□□□□□ -1.17
HERC4-202ENST00000373700 CNPP09543 421 aaKnown RBP7.77□□□□□ -1.17
HERC4-202ENST00000373700 NCK1P16333 377 aa7.77□□□□□ -1.17
HERC4-202ENST00000373700 HLA-DPA1P20036 260 aa7.77□□□□□ -1.17
HERC4-202ENST00000373700 ITGAXP20702 1163 aa7.77□□□□□ -1.17
HERC4-202ENST00000373700 CHN2P52757 468 aa7.77□□□□□ -1.17
HERC4-202ENST00000373700 SQLEQ14534 574 aa7.77□□□□□ -1.17
HERC4-202ENST00000373700 CRY1Q16526 586 aa7.77□□□□□ -1.17
HERC4-202ENST00000373700 PPP1R3AQ16821 1122 aa7.77□□□□□ -1.17
HERC4-202ENST00000373700 ANO7Q6IWH7 933 aa7.77□□□□□ -1.17
HERC4-202ENST00000373700 GCNT7Q6ZNI0 430 aa7.77□□□□□ -1.17
HERC4-202ENST00000373700 GET4Q7L5D6 327 aaPredicted RBP7.77□□□□□ -1.17
HERC4-202ENST00000373700 CLVS1Q8IUQ0 354 aaPredicted RBP7.77□□□□□ -1.17
HERC4-202ENST00000373700 PARP8Q8N3A8 854 aa7.77□□□□□ -1.17
HERC4-202ENST00000373700 ZNF461Q8TAF7 563 aa7.77□□□□□ -1.17
HERC4-202ENST00000373700 RDH11Q8TC12 318 aa7.77□□□□□ -1.17
HERC4-202ENST00000373700 RMND5BQ96G75 393 aaPredicted RBP7.77□□□□□ -1.17
HERC4-202ENST00000373700 IGSF21Q96ID5 467 aa7.77□□□□□ -1.17
HERC4-202ENST00000373700 STN1Q9H668 368 aaKnown RBP7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms