RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 TRNAU1APQ9NX07 287 aaKnown RBP18.85■□□□□ 0.61
CKS1B-203ENST00000368439 SIRPGQ9P1W8 387 aa18.85■□□□□ 0.61
CKS1B-203ENST00000368439 GULP1Q9UBP9 304 aa18.85■□□□□ 0.61
CKS1B-203ENST00000368439 FAM153AQ9UHL3 310 aa18.85■□□□□ 0.61
CKS1B-203ENST00000368439 RABGEF1Q9UJ41 708 aa18.85■□□□□ 0.61
CKS1B-203ENST00000368439 PACSIN2Q9UNF0 486 aaPredicted RBP18.85■□□□□ 0.61
CKS1B-203ENST00000368439 TMEM98Q9Y2Y6 226 aa18.85■□□□□ 0.61
CKS1B-203ENST00000368439 SPO11Q9Y5K1 396 aa18.85■□□□□ 0.61
CKS1B-203ENST00000368439 CAPN6Q9Y6Q1 641 aa18.85■□□□□ 0.61
CKS1B-203ENST00000368439 PKD1L2Q7Z442 2459 aa18.85■□□□□ 0.61
CKS1B-203ENST00000368439 ZFHX4Q86UP3 3567 aa18.85■□□□□ 0.61
CKS1B-203ENST00000368439 FADS2P1A8MWK0 482 aa18.84■□□□□ 0.61
CKS1B-203ENST00000368439 PID1Q7Z2X4 250 aa18.84■□□□□ 0.61
CKS1B-203ENST00000368439 CCHCR1Q8TD31 782 aa18.84■□□□□ 0.61
CKS1B-203ENST00000368439 MRGPRX2Q96LB1 330 aa18.84■□□□□ 0.61
CKS1B-203ENST00000368439 GORASP1Q9BQQ3 440 aa18.84■□□□□ 0.61
CKS1B-203ENST00000368439 FAM83DQ9H4H8 585 aa18.84■□□□□ 0.61
CKS1B-203ENST00000368439 ZFYVE1Q9HBF4 777 aa18.84■□□□□ 0.61
CKS1B-203ENST00000368439 PKD2L2Q9NZM6 624 aa18.84■□□□□ 0.61
CKS1B-203ENST00000368439 KLHL8Q9P2G9 620 aaPredicted RBP18.84■□□□□ 0.61
CKS1B-203ENST00000368439 AMFRQ9UKV5 643 aa18.84■□□□□ 0.61
CKS1B-203ENST00000368439 SHOC2Q9UQ13 582 aa18.84■□□□□ 0.61
CKS1B-203ENST00000368439 ZNF711Q9Y462 761 aa18.84■□□□□ 0.61
CKS1B-203ENST00000368439 PCDHB1Q9Y5F3 818 aa18.84■□□□□ 0.61
CKS1B-203ENST00000368439 ADGRG1Q9Y653 693 aa18.84■□□□□ 0.61
CKS1B-203ENST00000368439 CFAP47Q6ZTR5 3102 aa18.83■□□□□ 0.61
CKS1B-203ENST00000368439 GNPDA1P46926 289 aa18.83■□□□□ 0.6
CKS1B-203ENST00000368439 WNT3AP56704 352 aa18.83■□□□□ 0.6
CKS1B-203ENST00000368439 DOK6Q6PKX4 331 aa18.83■□□□□ 0.6
CKS1B-203ENST00000368439 PEX26Q7Z412 305 aa18.83■□□□□ 0.6
CKS1B-203ENST00000368439 C17orf82Q86X59 251 aaPredicted RBP18.83■□□□□ 0.6
CKS1B-203ENST00000368439 SYCE1Q8N0S2 351 aa18.83■□□□□ 0.6
CKS1B-203ENST00000368439 TXLNBQ8N3L3 684 aa18.83■□□□□ 0.6
CKS1B-203ENST00000368439 GPR26Q8NDV2 337 aa18.83■□□□□ 0.6
CKS1B-203ENST00000368439 FAM46DQ8NEK8 389 aa18.83■□□□□ 0.6
CKS1B-203ENST00000368439 HES6Q96HZ4 224 aa18.83■□□□□ 0.6
CKS1B-203ENST00000368439 FAM118BQ9BPY3 351 aa18.83■□□□□ 0.6
CKS1B-203ENST00000368439 CCDC3Q9BQI4 270 aa18.83■□□□□ 0.6
CKS1B-203ENST00000368439 ABCG4Q9H172 646 aa18.83■□□□□ 0.6
CKS1B-203ENST00000368439 SPATS2LQ9NUQ6 558 aaKnown RBP18.83■□□□□ 0.6
CKS1B-203ENST00000368439 NFKBIL1Q9UBC1 381 aaPredicted RBP18.83■□□□□ 0.6
CKS1B-203ENST00000368439 TRHDEQ9UKU6 1024 aa18.83■□□□□ 0.6
CKS1B-203ENST00000368439 PLEKHM1Q9Y4G2 1056 aa18.83■□□□□ 0.6
CKS1B-203ENST00000368439 PCYT1BQ9Y5K3 369 aaPredicted RBP18.83■□□□□ 0.6
CKS1B-203ENST00000368439 OAS3Q9Y6K5 1087 aaKnown RBP18.83■□□□□ 0.6
CKS1B-203ENST00000368439 KIF26BQ2KJY2 2108 aa18.83■□□□□ 0.6
CKS1B-203ENST00000368439 MIF4GDA9UHW6 222 aaKnown RBP18.82■□□□□ 0.6
CKS1B-203ENST00000368439 F5H423 210 aaPredicted RBP18.82■□□□□ 0.6
CKS1B-203ENST00000368439 H7C0C1 242 aa18.82■□□□□ 0.6
CKS1B-203ENST00000368439 NTN3O00634 580 aaPredicted RBP18.82■□□□□ 0.6
CKS1B-203ENST00000368439 AURKAO14965 403 aa18.82■□□□□ 0.6
CKS1B-203ENST00000368439 INPP4BO15327 924 aa18.82■□□□□ 0.6
CKS1B-203ENST00000368439 FTCDO95954 541 aa18.82■□□□□ 0.6
CKS1B-203ENST00000368439 EPOP01588 193 aa18.82■□□□□ 0.6
CKS1B-203ENST00000368439 AK4P27144 223 aaPredicted RBP18.82■□□□□ 0.6
CKS1B-203ENST00000368439 ADCY8P40145 1251 aa18.82■□□□□ 0.6
CKS1B-203ENST00000368439 ATP5OP48047 213 aa18.82■□□□□ 0.6
CKS1B-203ENST00000368439 GSDMDP57764 484 aa18.82■□□□□ 0.6
CKS1B-203ENST00000368439 DCDC1P59894 354 aa18.82■□□□□ 0.6
CKS1B-203ENST00000368439 CTBSQ01459 385 aa18.82■□□□□ 0.6
CKS1B-203ENST00000368439 HLTFQ14527 1009 aaKnown RBP eCLIP18.82■□□□□ 0.6
CKS1B-203ENST00000368439 PYCR3Q53H96 274 aa18.82■□□□□ 0.6
CKS1B-203ENST00000368439 CCDC74AQ96AQ1 378 aa18.82■□□□□ 0.6
CKS1B-203ENST00000368439 NXPE2Q96DL1 559 aa18.82■□□□□ 0.6
CKS1B-203ENST00000368439 DEPDC7Q96QD5 511 aa18.82■□□□□ 0.6
CKS1B-203ENST00000368439 SUDS3Q9H7L9 328 aaPredicted RBP18.82■□□□□ 0.6
CKS1B-203ENST00000368439 UNC13CQ8NB66 2214 aa18.82■□□□□ 0.6
CKS1B-203ENST00000368439 DNAJC6O75061 913 aa18.81■□□□□ 0.6
CKS1B-203ENST00000368439 CSO75390 466 aaKnown RBP18.81■□□□□ 0.6
CKS1B-203ENST00000368439 TCEA3O75764 348 aa18.81■□□□□ 0.6
CKS1B-203ENST00000368439 TJP3O95049 919 aa18.81■□□□□ 0.6
CKS1B-203ENST00000368439 ATP1A1P05023 1023 aaKnown RBP18.81■□□□□ 0.6
CKS1B-203ENST00000368439 FGF1P05230 155 aa18.81■□□□□ 0.6
CKS1B-203ENST00000368439 RBP3P10745 1247 aa18.81■□□□□ 0.6
CKS1B-203ENST00000368439 CHRNA4P43681 627 aa18.81■□□□□ 0.6
CKS1B-203ENST00000368439 PDX1P52945 283 aa18.81■□□□□ 0.6
CKS1B-203ENST00000368439 EIF3EP60228 445 aaKnown RBP18.81■□□□□ 0.6
CKS1B-203ENST00000368439 ILF3Q12906 894 aaKnown RBP eCLIP18.81■□□□□ 0.6
CKS1B-203ENST00000368439 KLF1Q13351 362 aaPredicted RBP18.81■□□□□ 0.6
CKS1B-203ENST00000368439 MPP3Q13368 585 aa18.81■□□□□ 0.6
CKS1B-203ENST00000368439 ISXQ2M1V0 245 aa18.81■□□□□ 0.6
CKS1B-203ENST00000368439 C14orf28Q4W4Y0 310 aa18.81■□□□□ 0.6
CKS1B-203ENST00000368439 SIRPB2Q5JXA9 342 aa18.81■□□□□ 0.6
CKS1B-203ENST00000368439 CERCAMQ5T4B2 595 aa18.81■□□□□ 0.6
CKS1B-203ENST00000368439 CCDC181Q5TID7 509 aa18.81■□□□□ 0.6
CKS1B-203ENST00000368439 RNF10Q8N5U6 811 aaKnown RBP18.81■□□□□ 0.6
CKS1B-203ENST00000368439 GSDMCQ9BYG8 508 aa18.81■□□□□ 0.6
CKS1B-203ENST00000368439 GBA3Q9H227 469 aa18.81■□□□□ 0.6
CKS1B-203ENST00000368439 DPEP2Q9H4A9 486 aa18.81■□□□□ 0.6
CKS1B-203ENST00000368439 TAAR2Q9P1P5 351 aa18.81■□□□□ 0.6
CKS1B-203ENST00000368439 VPS18Q9P253 973 aa18.81■□□□□ 0.6
CKS1B-203ENST00000368439 RSPH14Q9UHP6 348 aa18.81■□□□□ 0.6
CKS1B-203ENST00000368439 DSPP15924 2871 aaKnown RBP18.81■□□□□ 0.6
CKS1B-203ENST00000368439 URB1O60287 2271 aaKnown RBP18.8■□□□□ 0.6
CKS1B-203ENST00000368439 A0A1W2PNU3 283 aaPredicted RBP18.8■□□□□ 0.6
CKS1B-203ENST00000368439 A0A1W2PQM1 296 aa18.8■□□□□ 0.6
CKS1B-203ENST00000368439 GOLGA6L6A8MZA4 724 aa18.8■□□□□ 0.6
CKS1B-203ENST00000368439 B4DGG1 531 aa18.8■□□□□ 0.6
CKS1B-203ENST00000368439 GLB1P16278 677 aa18.8■□□□□ 0.6
CKS1B-203ENST00000368439 BPIP17213 487 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms