RNA–Protein interactions for RNA: ENST00000368147.8

SPTA1-201, Transcript of spectrin alpha, erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTA1, Length 7,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-201ENST00000368147 UPF1Q92900 1129 aaKnown RBP eCLIP7.06□□□□□ -1.28
SPTA1-201ENST00000368147 LINGO1Q96FE5 620 aa7.06□□□□□ -1.28
SPTA1-201ENST00000368147 MYO19Q96H55 970 aa7.06□□□□□ -1.28
SPTA1-201ENST00000368147 ABI3Q9P2A4 366 aa7.06□□□□□ -1.28
SPTA1-201ENST00000368147 ADAM28Q9UKQ2 775 aa7.06□□□□□ -1.28
SPTA1-201ENST00000368147 ZNF510Q9Y2H8 683 aa7.06□□□□□ -1.28
SPTA1-201ENST00000368147 ZNF521Q96K83 1311 aa7.06□□□□□ -1.28
SPTA1-201ENST00000368147 DIDO1Q9BTC0 2240 aaKnown RBP7.06□□□□□ -1.28
SPTA1-201ENST00000368147 SSU72P8A0A1W2PR75 194 aa7.05□□□□□ -1.28
SPTA1-201ENST00000368147 BCLAF3A2AJT9 711 aaKnown RBP7.05□□□□□ -1.28
SPTA1-201ENST00000368147 HSBP1L1C9JCN9 74 aa7.05□□□□□ -1.28
SPTA1-201ENST00000368147 PAPSS1O43252 624 aaPredicted RBP7.05□□□□□ -1.28
SPTA1-201ENST00000368147 NOS1APO75052 506 aaPredicted RBP7.05□□□□□ -1.28
SPTA1-201ENST00000368147 GCATO75600 419 aa7.05□□□□□ -1.28
SPTA1-201ENST00000368147 PRG2P13727 222 aa7.05□□□□□ -1.28
SPTA1-201ENST00000368147 USP4Q13107 963 aa7.05□□□□□ -1.28
SPTA1-201ENST00000368147 RNASE12Q5GAN4 147 aaKnown RBP7.05□□□□□ -1.28
SPTA1-201ENST00000368147 SLC24A5Q71RS6 500 aa7.05□□□□□ -1.28
SPTA1-201ENST00000368147 PEX5LQ8IYB4 626 aa7.05□□□□□ -1.28
SPTA1-201ENST00000368147 GHDCQ8N2G8 530 aa7.05□□□□□ -1.28
SPTA1-201ENST00000368147 METTL27Q8N6F8 245 aaPredicted RBP7.05□□□□□ -1.28
SPTA1-201ENST00000368147 AMER2Q8N7J2 671 aa7.05□□□□□ -1.28
SPTA1-201ENST00000368147 VANGL1Q8TAA9 524 aaPredicted RBP7.05□□□□□ -1.28
SPTA1-201ENST00000368147 WNT8BQ93098 351 aa7.05□□□□□ -1.28
SPTA1-201ENST00000368147 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.05□□□□□ -1.28
SPTA1-201ENST00000368147 ASB7Q9H672 318 aa7.05□□□□□ -1.28
SPTA1-201ENST00000368147 NCKIPSDQ9NZQ3 722 aa7.05□□□□□ -1.28
SPTA1-201ENST00000368147 PSME2Q9UL46 239 aa7.05□□□□□ -1.28
SPTA1-201ENST00000368147 PDE2AO00408 941 aaPredicted RBP7.05□□□□□ -1.28
SPTA1-201ENST00000368147 UBDO15205 165 aa7.05□□□□□ -1.28
SPTA1-201ENST00000368147 KCNA5P22460 613 aa7.05□□□□□ -1.28
SPTA1-201ENST00000368147 S100A3P33764 101 aa7.05□□□□□ -1.28
SPTA1-201ENST00000368147 PUS10Q3MIT2 529 aaKnown RBP7.05□□□□□ -1.28
SPTA1-201ENST00000368147 HSDL1Q3SXM5 330 aa7.05□□□□□ -1.28
SPTA1-201ENST00000368147 ARSIQ5FYB1 569 aa7.05□□□□□ -1.28
SPTA1-201ENST00000368147 GRASPQ7Z6J2 395 aaPredicted RBP7.05□□□□□ -1.28
SPTA1-201ENST00000368147 NPAS4Q8IUM7 802 aa7.05□□□□□ -1.28
SPTA1-201ENST00000368147 LZTR1Q8N653 840 aa7.05□□□□□ -1.28
SPTA1-201ENST00000368147 SPATA9Q9BWV2 254 aa7.05□□□□□ -1.28
SPTA1-201ENST00000368147 L1RE1Q9UN81 338 aa7.05□□□□□ -1.28
SPTA1-201ENST00000368147 A0A087X1B8 175 aa7.05□□□□□ -1.28
SPTA1-201ENST00000368147 CFHP08603 1231 aa7.05□□□□□ -1.28
SPTA1-201ENST00000368147 ZNF3P17036 446 aa7.05□□□□□ -1.28
SPTA1-201ENST00000368147 MECP2P51608 486 aaKnown RBP7.05□□□□□ -1.28
SPTA1-201ENST00000368147 SGCBQ16585 318 aa7.05□□□□□ -1.28
SPTA1-201ENST00000368147 TYSND1Q2T9J0 566 aa7.05□□□□□ -1.28
SPTA1-201ENST00000368147 STXBP5Q5T5C0 1151 aa7.05□□□□□ -1.28
SPTA1-201ENST00000368147 TTC27Q6P3X3 843 aa7.05□□□□□ -1.28
SPTA1-201ENST00000368147 UBE2R2Q712K3 238 aaPredicted RBP7.05□□□□□ -1.28
SPTA1-201ENST00000368147 PLCZ1Q86YW0 608 aa7.05□□□□□ -1.28
SPTA1-201ENST00000368147 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.05□□□□□ -1.28
SPTA1-201ENST00000368147 MEIOBQ8N635 442 aa7.05□□□□□ -1.28
SPTA1-201ENST00000368147 CDT1Q9H211 546 aa7.05□□□□□ -1.28
SPTA1-201ENST00000368147 ALDH8A1Q9H2A2 487 aaPredicted RBP7.05□□□□□ -1.28
SPTA1-201ENST00000368147 ATXN2Q99700 1313 aaKnown RBP7.05□□□□□ -1.28
SPTA1-201ENST00000368147 A8MUI8 341 aa7.05□□□□□ -1.28
SPTA1-201ENST00000368147 B8ZZF3 427 aa7.05□□□□□ -1.28
SPTA1-201ENST00000368147 VILLO15195 856 aa7.05□□□□□ -1.28
SPTA1-201ENST00000368147 TPST2O60704 377 aa7.05□□□□□ -1.28
SPTA1-201ENST00000368147 MT-CYBP00156 380 aaPredicted RBP7.05□□□□□ -1.28
SPTA1-201ENST00000368147 PTPN9P43378 593 aa7.05□□□□□ -1.28
SPTA1-201ENST00000368147 MANFP55145 182 aaKnown RBP7.05□□□□□ -1.28
SPTA1-201ENST00000368147 CMTR2Q8IYT2 770 aaKnown RBP7.05□□□□□ -1.28
SPTA1-201ENST00000368147 PCDH19Q8TAB3 1148 aa7.05□□□□□ -1.28
SPTA1-201ENST00000368147 PFDN5Q99471 154 aa7.05□□□□□ -1.28
SPTA1-201ENST00000368147 TXN2Q99757 166 aa7.05□□□□□ -1.28
SPTA1-201ENST00000368147 SALL1Q9NSC2 1324 aa7.05□□□□□ -1.28
SPTA1-201ENST00000368147 DHFRP00374 187 aa7.05□□□□□ -1.28
SPTA1-201ENST00000368147 CRABP2P29373 138 aa7.05□□□□□ -1.28
SPTA1-201ENST00000368147 CACNA2D1P54289 1103 aa7.05□□□□□ -1.28
SPTA1-201ENST00000368147 MLIPQ5VWP3 458 aa7.05□□□□□ -1.28
SPTA1-201ENST00000368147 PRCCQ92733 491 aaPredicted RBP7.05□□□□□ -1.28
SPTA1-201ENST00000368147 RNF145Q96MT1 663 aa7.05□□□□□ -1.28
SPTA1-201ENST00000368147 DPEP3Q9H4B8 488 aa7.05□□□□□ -1.28
SPTA1-201ENST00000368147 UPB1Q9UBR1 384 aa7.05□□□□□ -1.28
SPTA1-201ENST00000368147 DMGDHQ9UI17 866 aaKnown RBP7.05□□□□□ -1.28
SPTA1-201ENST00000368147 CNOT6Q9ULM6 557 aaKnown RBP7.05□□□□□ -1.28
SPTA1-201ENST00000368147 STARD13Q9Y3M8 1113 aa7.05□□□□□ -1.28
SPTA1-201ENST00000368147 AKAP8O43823 692 aaKnown RBP7.05□□□□□ -1.28
SPTA1-201ENST00000368147 MAGEC1O60732 1142 aa7.05□□□□□ -1.28
SPTA1-201ENST00000368147 PROSCO94903 275 aa7.05□□□□□ -1.28
SPTA1-201ENST00000368147 ANXA6P08133 673 aa7.05□□□□□ -1.28
SPTA1-201ENST00000368147 GIMD1P0DJR0 217 aa7.05□□□□□ -1.28
SPTA1-201ENST00000368147 FKBP1BP68106 108 aa7.05□□□□□ -1.28
SPTA1-201ENST00000368147 CAP1Q01518 475 aa7.05□□□□□ -1.28
SPTA1-201ENST00000368147 CCNG2Q16589 344 aa7.05□□□□□ -1.28
SPTA1-201ENST00000368147 ATXN7L2Q5T6C5 722 aaPredicted RBP7.05□□□□□ -1.28
SPTA1-201ENST00000368147 GCNT7Q6ZNI0 430 aa7.05□□□□□ -1.28
SPTA1-201ENST00000368147 LDB1Q86U70 411 aaPredicted RBP7.05□□□□□ -1.28
SPTA1-201ENST00000368147 PIGZQ86VD9 579 aa7.05□□□□□ -1.28
SPTA1-201ENST00000368147 MMAAQ8IVH4 418 aaKnown RBP7.05□□□□□ -1.28
SPTA1-201ENST00000368147 CADM2Q8N3J6 435 aa7.05□□□□□ -1.28
SPTA1-201ENST00000368147 KREMEN2Q8NCW0 462 aa7.05□□□□□ -1.28
SPTA1-201ENST00000368147 C5orf34Q96MH7 638 aa7.05□□□□□ -1.28
SPTA1-201ENST00000368147 PCDHGB3Q9Y5G1 929 aa7.05□□□□□ -1.28
SPTA1-201ENST00000368147 TSPAN4O14817 238 aa7.04□□□□□ -1.28
SPTA1-201ENST00000368147 CATP04040 527 aaKnown RBP7.04□□□□□ -1.28
SPTA1-201ENST00000368147 ADRB2P07550 413 aa7.04□□□□□ -1.28
SPTA1-201ENST00000368147 MGAT5Q09328 741 aa7.04□□□□□ -1.28
SPTA1-201ENST00000368147 KCNMA1Q12791 1236 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms