RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 FAM83AQ86UY5 434 aa17.21■□□□□ 0.35
COL27A1-201ENST00000356083 TNS4Q8IZW8 715 aa17.21■□□□□ 0.35
COL27A1-201ENST00000356083 OR6K6Q8NGW6 343 aa17.21■□□□□ 0.35
COL27A1-201ENST00000356083 ZHX1-C8orf76Q96EF9 292 aa17.21■□□□□ 0.35
COL27A1-201ENST00000356083 BORCS8Q96FH0 119 aa17.21■□□□□ 0.35
COL27A1-201ENST00000356083 CCDC120Q96HB5 630 aa17.21■□□□□ 0.35
COL27A1-201ENST00000356083 GPN1Q9HCN4 374 aaPredicted RBP17.21■□□□□ 0.35
COL27A1-201ENST00000356083 PFDN2Q9UHV9 154 aa17.21■□□□□ 0.35
COL27A1-201ENST00000356083 PCDHGB5Q9Y5G0 923 aa17.21■□□□□ 0.35
COL27A1-201ENST00000356083 A0A1W2PQJ5 194 aa17.21■□□□□ 0.35
COL27A1-201ENST00000356083 UNC5AQ6ZN44 842 aa17.21■□□□□ 0.35
COL27A1-201ENST00000356083 SMAD9O15198 467 aaKnown RBP17.21■□□□□ 0.35
COL27A1-201ENST00000356083 TLX3O43711 291 aaPredicted RBP17.21■□□□□ 0.35
COL27A1-201ENST00000356083 LSM8O95777 96 aaKnown RBP17.21■□□□□ 0.35
COL27A1-201ENST00000356083 PTPN4P29074 926 aa17.21■□□□□ 0.35
COL27A1-201ENST00000356083 RPL22P35268 128 aaKnown RBP17.21■□□□□ 0.35
COL27A1-201ENST00000356083 GRIA4P48058 902 aa17.21■□□□□ 0.35
COL27A1-201ENST00000356083 CCZ1BP86790 482 aa17.21■□□□□ 0.35
COL27A1-201ENST00000356083 CCZ1P86791 482 aaPredicted RBP17.21■□□□□ 0.35
COL27A1-201ENST00000356083 DEFB115Q30KQ5 88 aa17.21■□□□□ 0.35
COL27A1-201ENST00000356083 OGFRL1Q5TC84 451 aaPredicted RBP17.21■□□□□ 0.35
COL27A1-201ENST00000356083 TRAPPC9Q96Q05 1148 aa17.21■□□□□ 0.35
COL27A1-201ENST00000356083 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.21■□□□□ 0.359e-8■■■□□ 15.9
COL27A1-201ENST00000356083 DGKZQ13574 1117 aa17.21■□□□□ 0.35
COL27A1-201ENST00000356083 GIT2Q14161 759 aa17.21■□□□□ 0.35
COL27A1-201ENST00000356083 LYPLAL1Q5VWZ2 237 aa17.21■□□□□ 0.35
COL27A1-201ENST00000356083 TMC8Q8IU68 726 aa17.21■□□□□ 0.35
COL27A1-201ENST00000356083 PTGR2Q8N8N7 351 aaPredicted RBP17.21■□□□□ 0.35
COL27A1-201ENST00000356083 OR52J3Q8NH60 311 aa17.21■□□□□ 0.35
COL27A1-201ENST00000356083 NMUR1Q9HB89 426 aa17.21■□□□□ 0.35
COL27A1-201ENST00000356083 CLEC3AO75596 197 aa17.21■□□□□ 0.35
COL27A1-201ENST00000356083 RASGEF1BQ0VAM2 473 aa17.21■□□□□ 0.35
COL27A1-201ENST00000356083 LARS2Q15031 903 aaKnown RBP17.21■□□□□ 0.35
COL27A1-201ENST00000356083 PSTKQ8IV42 348 aaKnown RBP17.21■□□□□ 0.35
COL27A1-201ENST00000356083 RASSF5Q8WWW0 418 aa17.21■□□□□ 0.35
COL27A1-201ENST00000356083 PPP1R14BQ96C90 147 aa17.21■□□□□ 0.35
COL27A1-201ENST00000356083 ISCA1Q9BUE6 129 aa17.21■□□□□ 0.35
COL27A1-201ENST00000356083 MID1O15344 667 aa17.21■□□□□ 0.34
COL27A1-201ENST00000356083 NUDT17P0C025 328 aa17.21■□□□□ 0.34
COL27A1-201ENST00000356083 MC4RP32245 332 aa17.21■□□□□ 0.34
COL27A1-201ENST00000356083 GPR107Q5VW38 600 aa17.21■□□□□ 0.34
COL27A1-201ENST00000356083 PCDH9Q9HC56 1237 aa17.21■□□□□ 0.34
COL27A1-201ENST00000356083 ZSCAN5DPP0CG00 497 aa17.2■□□□□ 0.34
COL27A1-201ENST00000356083 USF2Q15853 346 aaPredicted RBP17.2■□□□□ 0.34
COL27A1-201ENST00000356083 GPRIN3Q6ZVF9 776 aa17.2■□□□□ 0.34
COL27A1-201ENST00000356083 OXNAD1Q96HP4 312 aaPredicted RBP17.2■□□□□ 0.34
COL27A1-201ENST00000356083 TOR3AQ9H497 397 aa17.2■□□□□ 0.34
COL27A1-201ENST00000356083 METTL8Q9H825 291 aaKnown RBP17.2■□□□□ 0.34
COL27A1-201ENST00000356083 GPR89AB7ZAQ6 455 aa17.2■□□□□ 0.34
COL27A1-201ENST00000356083 L7N2F9 121 aa17.2■□□□□ 0.34
COL27A1-201ENST00000356083 GPR89BP0CG08 455 aa17.2■□□□□ 0.34
COL27A1-201ENST00000356083 RPL3P39023 403 aaKnown RBP17.2■□□□□ 0.34
COL27A1-201ENST00000356083 MAGEA12P43365 314 aa17.2■□□□□ 0.34
COL27A1-201ENST00000356083 VAMP2P63027 116 aa17.2■□□□□ 0.34
COL27A1-201ENST00000356083 SMAD3P84022 425 aaKnown RBP17.2■□□□□ 0.34
COL27A1-201ENST00000356083 HYAL2Q12891 473 aa17.2■□□□□ 0.34
COL27A1-201ENST00000356083 HSPB3Q12988 150 aa17.2■□□□□ 0.34
COL27A1-201ENST00000356083 COL9A2Q14055 689 aaPredicted RBP17.2■□□□□ 0.34
COL27A1-201ENST00000356083 DUPD1Q68J44 220 aa17.2■□□□□ 0.34
COL27A1-201ENST00000356083 THRSPQ92748 146 aa17.2■□□□□ 0.34
COL27A1-201ENST00000356083 MFSD3Q96ES6 412 aa17.2■□□□□ 0.34
COL27A1-201ENST00000356083 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.2■□□□□ 0.34
COL27A1-201ENST00000356083 ACTL7BQ9Y614 415 aa17.2■□□□□ 0.34
COL27A1-201ENST00000356083 CACNA1CQ13936 2221 aa17.2■□□□□ 0.34
COL27A1-201ENST00000356083 H3BM21 787 aa17.2■□□□□ 0.34
COL27A1-201ENST00000356083 OR1D2P34982 312 aa17.2■□□□□ 0.34
COL27A1-201ENST00000356083 RAB39AQ14964 217 aa17.2■□□□□ 0.34
COL27A1-201ENST00000356083 PDCD4Q53EL6 469 aaKnown RBP17.2■□□□□ 0.34
COL27A1-201ENST00000356083 MSANTD2Q6P1R3 559 aa17.2■□□□□ 0.34
COL27A1-201ENST00000356083 C1orf94Q6P1W5 598 aa17.2■□□□□ 0.34
COL27A1-201ENST00000356083 ZNF557Q8N988 423 aaPredicted RBP17.2■□□□□ 0.34
COL27A1-201ENST00000356083 OR2AJ1Q8NGZ0 328 aa17.2■□□□□ 0.34
COL27A1-201ENST00000356083 SEC61A2Q9H9S3 476 aa17.2■□□□□ 0.34
COL27A1-201ENST00000356083 ADGRE2Q9UHX3 823 aa17.2■□□□□ 0.34
COL27A1-201ENST00000356083 FCER2P06734 321 aa17.2■□□□□ 0.34
COL27A1-201ENST00000356083 PRKCHP24723 683 aa17.2■□□□□ 0.34
COL27A1-201ENST00000356083 C5orf22Q49AR2 442 aa17.2■□□□□ 0.34
COL27A1-201ENST00000356083 ATXN7L2Q5T6C5 722 aaPredicted RBP17.2■□□□□ 0.34
COL27A1-201ENST00000356083 TMEM164Q5U3C3 297 aa17.2■□□□□ 0.34
COL27A1-201ENST00000356083 TMPRSS6Q8IU80 811 aa17.2■□□□□ 0.34
COL27A1-201ENST00000356083 SLC43A3Q8NBI5 491 aa17.2■□□□□ 0.34
COL27A1-201ENST00000356083 HDAC10Q969S8 669 aa17.2■□□□□ 0.34
COL27A1-201ENST00000356083 TMEM27Q9HBJ8 222 aa17.2■□□□□ 0.34
COL27A1-201ENST00000356083 SH3BGRL2Q9UJC5 107 aa17.2■□□□□ 0.34
COL27A1-201ENST00000356083 UMODL1Q5DID0 1318 aa17.2■□□□□ 0.34
COL27A1-201ENST00000356083 NPC1L1Q9UHC9 1359 aa17.2■□□□□ 0.34
COL27A1-201ENST00000356083 A8MUI8 341 aa17.2■□□□□ 0.34
COL27A1-201ENST00000356083 PLOD2O00469 737 aa17.2■□□□□ 0.34
COL27A1-201ENST00000356083 GLUD1P00367 558 aa17.2■□□□□ 0.34
COL27A1-201ENST00000356083 FGBP02675 491 aa17.2■□□□□ 0.34
COL27A1-201ENST00000356083 CCKBRP32239 447 aa17.2■□□□□ 0.34
COL27A1-201ENST00000356083 IST1P53990 364 aa17.2■□□□□ 0.34
COL27A1-201ENST00000356083 POLNQ7Z5Q5 900 aa17.2■□□□□ 0.34
COL27A1-201ENST00000356083 METTL3Q86U44 580 aaKnown RBP17.2■□□□□ 0.34
COL27A1-201ENST00000356083 ARL10Q8N8L6 244 aa17.2■□□□□ 0.34
COL27A1-201ENST00000356083 DNERQ8NFT8 737 aa17.2■□□□□ 0.34
COL27A1-201ENST00000356083 POLR3HQ9Y535 204 aaPredicted RBP17.2■□□□□ 0.34
COL27A1-201ENST00000356083 SLC26A4O43511 780 aa17.2■□□□□ 0.34
COL27A1-201ENST00000356083 NR0B1P51843 470 aaKnown RBP17.2■□□□□ 0.34
COL27A1-201ENST00000356083 CTBP1Q13363 440 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms