RNA–Protein interactions for RNA: ENST00000340058.5

RET-201, Transcript of ret proto-oncogene, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RET, Length 4,149 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RET-201ENST00000340058 FAM159BA6NKW6 160 aa14.65□□□□□ -0.06
RET-201ENST00000340058 M0R3G1 203 aa14.65□□□□□ -0.06
RET-201ENST00000340058 CYP2A6P11509 494 aaPredicted RBP14.65□□□□□ -0.06
RET-201ENST00000340058 MTX3Q5HYI7 312 aa14.65□□□□□ -0.06
RET-201ENST00000340058 SPESP1Q6UW49 350 aa14.65□□□□□ -0.06
RET-201ENST00000340058 ANKRD46Q86W74 232 aa14.65□□□□□ -0.06
RET-201ENST00000340058 PHTF2Q8N3S3 785 aa14.65□□□□□ -0.06
RET-201ENST00000340058 KREMEN2Q8NCW0 462 aa14.65□□□□□ -0.06
RET-201ENST00000340058 TWIST2Q8WVJ9 160 aa14.65□□□□□ -0.06
RET-201ENST00000340058 CIB1Q99828 191 aa14.65□□□□□ -0.06
RET-201ENST00000340058 POLR3BQ9NW08 1133 aaPredicted RBP14.65□□□□□ -0.06
RET-201ENST00000340058 COMMD8Q9NX08 183 aa14.65□□□□□ -0.06
RET-201ENST00000340058 KIAA1522Q9P206 1035 aaPredicted RBP14.65□□□□□ -0.06
RET-201ENST00000340058 BLOC1S6Q9UL45 172 aa14.65□□□□□ -0.06
RET-201ENST00000340058 SRCAPQ6ZRS2 3230 aa14.65□□□□□ -0.06
RET-201ENST00000340058 TOGARAM1Q9Y4F4 1720 aa14.65□□□□□ -0.06
RET-201ENST00000340058 H0Y858 1186 aa14.65□□□□□ -0.06
RET-201ENST00000340058 FFAR2O15552 330 aa14.65□□□□□ -0.06
RET-201ENST00000340058 TCEA3O75764 348 aa14.65□□□□□ -0.06
RET-201ENST00000340058 ARL4DP49703 201 aa14.65□□□□□ -0.06
RET-201ENST00000340058 IL10RBQ08334 325 aa14.65□□□□□ -0.06
RET-201ENST00000340058 SQLEQ14534 574 aa14.65□□□□□ -0.06
RET-201ENST00000340058 SIRPB2Q5JXA9 342 aa14.65□□□□□ -0.06
RET-201ENST00000340058 ZYG11AQ6WRX3 759 aa14.65□□□□□ -0.06
RET-201ENST00000340058 UBE2R2Q712K3 238 aaPredicted RBP14.65□□□□□ -0.06
RET-201ENST00000340058 NET1Q7Z628 596 aaPredicted RBP14.65□□□□□ -0.06
RET-201ENST00000340058 SERPINA9Q86WD7 417 aa14.65□□□□□ -0.06
RET-201ENST00000340058 FLCNQ8NFG4 579 aa14.65□□□□□ -0.06
RET-201ENST00000340058 B4GALNT2Q8NHY0 566 aa14.65□□□□□ -0.06
RET-201ENST00000340058 STYXQ8WUJ0 223 aa14.65□□□□□ -0.06
RET-201ENST00000340058 FCRL3Q96P31 734 aaPredicted RBP14.65□□□□□ -0.06
RET-201ENST00000340058 VRTNQ9H8Y1 702 aa14.65□□□□□ -0.06
RET-201ENST00000340058 CLIC5Q9NZA1 410 aa14.65□□□□□ -0.06
RET-201ENST00000340058 ASF1AQ9Y294 204 aa14.65□□□□□ -0.06
RET-201ENST00000340058 A0A0U1RQS6 177 aa14.64□□□□□ -0.07
RET-201ENST00000340058 MTMR11A4FU01 709 aa14.64□□□□□ -0.07
RET-201ENST00000340058 H3BMM5 538 aa14.64□□□□□ -0.07
RET-201ENST00000340058 DEAF1O75398 565 aaPredicted RBP14.64□□□□□ -0.07
RET-201ENST00000340058 CES1P23141 567 aa14.64□□□□□ -0.07
RET-201ENST00000340058 MAPK1P28482 360 aa14.64□□□□□ -0.07
RET-201ENST00000340058 ACSBG2Q5FVE4 666 aa14.64□□□□□ -0.07
RET-201ENST00000340058 MS4A13Q5J8X5 152 aa14.64□□□□□ -0.07
RET-201ENST00000340058 VPS33AQ96AX1 596 aa14.64□□□□□ -0.07
RET-201ENST00000340058 RIBC2Q9H4K1 309 aa14.64□□□□□ -0.07
RET-201ENST00000340058 IPPKQ9H8X2 491 aa14.64□□□□□ -0.07
RET-201ENST00000340058 FBXO10Q9UK96 956 aa14.64□□□□□ -0.07
RET-201ENST00000340058 STRCP1A6NGW2 1772 aa14.64□□□□□ -0.07
RET-201ENST00000340058 PER2O15055 1255 aa14.64□□□□□ -0.07
RET-201ENST00000340058 MLYCDO95822 493 aa14.64□□□□□ -0.07
RET-201ENST00000340058 LAG3P18627 525 aa14.64□□□□□ -0.07
RET-201ENST00000340058 CDH4P55283 916 aa14.64□□□□□ -0.07
RET-201ENST00000340058 HPCAP84074 193 aa14.64□□□□□ -0.07
RET-201ENST00000340058 SPRED3Q2MJR0 410 aa14.64□□□□□ -0.07
RET-201ENST00000340058 GET4Q7L5D6 327 aaPredicted RBP14.64□□□□□ -0.07
RET-201ENST00000340058 TLE6Q9H808 572 aa14.64□□□□□ -0.07
RET-201ENST00000340058 BRD9Q9H8M2 597 aa14.64□□□□□ -0.07
RET-201ENST00000340058 SLC45A1Q9Y2W3 748 aa14.64□□□□□ -0.07
RET-201ENST00000340058 LAMA4Q16363 1823 aa14.64□□□□□ -0.07
RET-201ENST00000340058 PIP5K1BO14986 540 aa14.64□□□□□ -0.07
RET-201ENST00000340058 ATP6V0D1P61421 351 aa14.64□□□□□ -0.07
RET-201ENST00000340058 ZC3H12BQ5HYM0 836 aaKnown RBP14.64□□□□□ -0.07
RET-201ENST00000340058 ZC3HC1Q86WB0 502 aaKnown RBP14.64□□□□□ -0.07
RET-201ENST00000340058 OR9I1Q8NGQ6 314 aa14.64□□□□□ -0.07
RET-201ENST00000340058 BRSK1Q8TDC3 778 aa14.64□□□□□ -0.07
RET-201ENST00000340058 KLK6Q92876 244 aa14.64□□□□□ -0.07
RET-201ENST00000340058 PAWRQ96IZ0 340 aaKnown RBP14.64□□□□□ -0.07
RET-201ENST00000340058 THG1LQ9NWX6 298 aaKnown RBP14.64□□□□□ -0.07
RET-201ENST00000340058 CNTN6Q9UQ52 1028 aa14.64□□□□□ -0.07
RET-201ENST00000340058 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.64□□□□□ -0.07
RET-201ENST00000340058 DLX3O60479 287 aa14.64□□□□□ -0.07
RET-201ENST00000340058 TM7SF2O76062 418 aa14.64□□□□□ -0.07
RET-201ENST00000340058 ACADMP11310 421 aa14.64□□□□□ -0.07
RET-201ENST00000340058 CLCQ05315 142 aa14.64□□□□□ -0.07
RET-201ENST00000340058 TRIM60Q495X7 471 aa14.64□□□□□ -0.07
RET-201ENST00000340058 KIAA1324Q6UXG2 1013 aaKnown RBP14.64□□□□□ -0.07
RET-201ENST00000340058 SPPL2CQ8IUH8 684 aa14.64□□□□□ -0.07
RET-201ENST00000340058 PLD3Q8IV08 490 aa14.64□□□□□ -0.07
RET-201ENST00000340058 LPGAT1Q92604 370 aa14.64□□□□□ -0.07
RET-201ENST00000340058 CDKN2AIPNLQ96HQ2 116 aa14.64□□□□□ -0.07
RET-201ENST00000340058 PLEKHA8Q96JA3 519 aa14.64□□□□□ -0.07
RET-201ENST00000340058 KLHL32Q96NJ5 620 aa14.64□□□□□ -0.07
RET-201ENST00000340058 PCDHAC1Q9H158 963 aa14.64□□□□□ -0.07
RET-201ENST00000340058 MMADHCQ9H3L0 296 aaPredicted RBP14.64□□□□□ -0.07
RET-201ENST00000340058 CDH22Q9UJ99 828 aa14.64□□□□□ -0.07
RET-201ENST00000340058 MTF2Q9Y483 593 aaPredicted RBP14.64□□□□□ -0.07
RET-201ENST00000340058 SERPINI2O75830 405 aa14.63□□□□□ -0.07
RET-201ENST00000340058 CAPN1P07384 714 aa14.63□□□□□ -0.07
RET-201ENST00000340058 IGFBP6P24592 240 aaPredicted RBP14.63□□□□□ -0.07
RET-201ENST00000340058 NDST2P52849 883 aa14.63□□□□□ -0.07
RET-201ENST00000340058 ECT2LQ008S8 904 aa14.63□□□□□ -0.07
RET-201ENST00000340058 GALNT2Q10471 571 aa14.63□□□□□ -0.07
RET-201ENST00000340058 MTA1Q13330 715 aa14.63□□□□□ -0.07
RET-201ENST00000340058 NAE1Q13564 534 aa14.63□□□□□ -0.07
RET-201ENST00000340058 PRKD1Q15139 912 aaPredicted RBP14.63□□□□□ -0.07
RET-201ENST00000340058 IL23RQ5VWK5 629 aa14.63□□□□□ -0.07
RET-201ENST00000340058 ARMC6Q6NXE6 501 aa14.63□□□□□ -0.07
RET-201ENST00000340058 SH3GL1Q99961 368 aa14.63□□□□□ -0.07
RET-201ENST00000340058 CACNA2D2Q9NY47 1150 aa14.63□□□□□ -0.07
RET-201ENST00000340058 SCN3BQ9NY72 215 aa14.63□□□□□ -0.07
RET-201ENST00000340058 ANAPC2Q9UJX6 822 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms