RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 CCDC162PA2VCL2 907 aa15.32■□□□□ 0.04
BRCC3-201ENST00000330045 SAC3D1A6NKF1 404 aa15.32■□□□□ 0.04
BRCC3-201ENST00000330045 HSD17B1P14061 328 aa15.32■□□□□ 0.04
BRCC3-201ENST00000330045 GFAPP14136 432 aa15.32■□□□□ 0.04
BRCC3-201ENST00000330045 LBPP18428 481 aa15.32■□□□□ 0.04
BRCC3-201ENST00000330045 SUOXP51687 545 aa15.32■□□□□ 0.04
BRCC3-201ENST00000330045 NKX3-2P78367 333 aa15.32■□□□□ 0.04
BRCC3-201ENST00000330045 IL10RBQ08334 325 aa15.32■□□□□ 0.04
BRCC3-201ENST00000330045 EFEMP1Q12805 493 aa15.32■□□□□ 0.04
BRCC3-201ENST00000330045 SEMA3AQ14563 771 aa15.32■□□□□ 0.04
BRCC3-201ENST00000330045 INPP5AQ14642 412 aa15.32■□□□□ 0.04
BRCC3-201ENST00000330045 POLD3Q15054 466 aaPredicted RBP15.32■□□□□ 0.04
BRCC3-201ENST00000330045 RPS6KA2Q15349 733 aa15.32■□□□□ 0.04
BRCC3-201ENST00000330045 FBXL22Q6P050 247 aa15.32■□□□□ 0.04
BRCC3-201ENST00000330045 FAM47BQ8NA70 645 aa15.32■□□□□ 0.04
BRCC3-201ENST00000330045 HM13Q8TCT9 377 aa15.32■□□□□ 0.04
BRCC3-201ENST00000330045 TRPC4APQ8TEL6 797 aa15.32■□□□□ 0.04
BRCC3-201ENST00000330045 TMIGD2Q96BF3 282 aa15.32■□□□□ 0.04
BRCC3-201ENST00000330045 KCNA7Q96RP8 456 aa15.32■□□□□ 0.04
BRCC3-201ENST00000330045 ATOH8Q96SQ7 321 aa15.32■□□□□ 0.04
BRCC3-201ENST00000330045 ADAM2Q99965 735 aa15.32■□□□□ 0.04
BRCC3-201ENST00000330045 TUBB1Q9H4B7 451 aa15.32■□□□□ 0.04
BRCC3-201ENST00000330045 CLK4Q9HAZ1 481 aaKnown RBP15.32■□□□□ 0.04
BRCC3-201ENST00000330045 POPDC3Q9HBV1 291 aa15.32■□□□□ 0.04
BRCC3-201ENST00000330045 GID8Q9NWU2 228 aa15.32■□□□□ 0.04
BRCC3-201ENST00000330045 PCDHB8Q9UN66 801 aa15.32■□□□□ 0.04
BRCC3-201ENST00000330045 SQORQ9Y6N5 450 aa15.32■□□□□ 0.04
BRCC3-201ENST00000330045 C9JVG2 144 aa15.31■□□□□ 0.04
BRCC3-201ENST00000330045 H3BMM5 538 aa15.31■□□□□ 0.04
BRCC3-201ENST00000330045 GJB3O75712 270 aa15.31■□□□□ 0.04
BRCC3-201ENST00000330045 MATN4O95460 622 aa15.31■□□□□ 0.04
BRCC3-201ENST00000330045 INHAP05111 366 aa15.31■□□□□ 0.04
BRCC3-201ENST00000330045 HGFP14210 728 aa15.31■□□□□ 0.04
BRCC3-201ENST00000330045 IL10P22301 178 aa15.31■□□□□ 0.04
BRCC3-201ENST00000330045 GPR15P49685 360 aa15.31■□□□□ 0.04
BRCC3-201ENST00000330045 TUBA4AP68366 448 aa15.31■□□□□ 0.04
BRCC3-201ENST00000330045 BNIP2Q12982 314 aa15.31■□□□□ 0.04
BRCC3-201ENST00000330045 CAPRIN1Q14444 709 aaKnown RBP15.31■□□□□ 0.04
BRCC3-201ENST00000330045 LPIN1Q14693 890 aa15.31■□□□□ 0.04
BRCC3-201ENST00000330045 RAP1GAP2Q684P5 730 aa15.31■□□□□ 0.04
BRCC3-201ENST00000330045 CAMK1DQ8IU85 385 aa15.31■□□□□ 0.04
BRCC3-201ENST00000330045 PACRGLQ8N7B6 248 aa15.31■□□□□ 0.04
BRCC3-201ENST00000330045 DRAXINQ8NBI3 349 aaPredicted RBP15.31■□□□□ 0.04
BRCC3-201ENST00000330045 OR13C4Q8NGS5 318 aa15.31■□□□□ 0.04
BRCC3-201ENST00000330045 PEX13Q92968 403 aa15.31■□□□□ 0.04
BRCC3-201ENST00000330045 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.31■□□□□ 0.04
BRCC3-201ENST00000330045 FBXO44Q9H4M3 255 aa15.31■□□□□ 0.04
BRCC3-201ENST00000330045 TFB2MQ9H5Q4 396 aaKnown RBP15.31■□□□□ 0.04
BRCC3-201ENST00000330045 SDR39U1Q9NRG7 319 aaPredicted RBP15.31■□□□□ 0.04
BRCC3-201ENST00000330045 SLC8A2Q9UPR5 921 aa15.31■□□□□ 0.04
BRCC3-201ENST00000330045 FXYD1O00168 92 aa15.31■□□□□ 0.04
BRCC3-201ENST00000330045 RAMP2O60895 175 aa15.31■□□□□ 0.04
BRCC3-201ENST00000330045 CLASP2O75122 1294 aaKnown RBP15.31■□□□□ 0.04
BRCC3-201ENST00000330045 RPP40O75818 363 aaKnown RBP15.31■□□□□ 0.04
BRCC3-201ENST00000330045 LINC00032P0C843 101 aa15.31■□□□□ 0.04
BRCC3-201ENST00000330045 HLA-DPA1P20036 260 aa15.31■□□□□ 0.04
BRCC3-201ENST00000330045 PBX3P40426 434 aa15.31■□□□□ 0.04
BRCC3-201ENST00000330045 APLP1P51693 650 aa15.31■□□□□ 0.04
BRCC3-201ENST00000330045 PLOD1Q02809 727 aaPredicted RBP15.31■□□□□ 0.04
BRCC3-201ENST00000330045 DSC3Q14574 896 aa15.31■□□□□ 0.04
BRCC3-201ENST00000330045 INTS11Q5TA45 600 aaKnown RBP15.31■□□□□ 0.04
BRCC3-201ENST00000330045 LHX8Q68G74 356 aa15.31■□□□□ 0.04
BRCC3-201ENST00000330045 CBR4Q8N4T8 237 aa15.31■□□□□ 0.04
BRCC3-201ENST00000330045 FIBCD1Q8N539 461 aa15.31■□□□□ 0.04
BRCC3-201ENST00000330045 MFSD2AQ8NA29 543 aa15.31■□□□□ 0.04
BRCC3-201ENST00000330045 OR4L1Q8NH43 312 aa15.31■□□□□ 0.04
BRCC3-201ENST00000330045 FAM81AQ8TBF8 368 aa15.31■□□□□ 0.04
BRCC3-201ENST00000330045 LRRC58Q96CX6 371 aa15.31■□□□□ 0.04
BRCC3-201ENST00000330045 BTN2A3PQ96KV6 586 aa15.31■□□□□ 0.04
BRCC3-201ENST00000330045 POLR1EQ9GZS1 481 aaKnown RBP15.31■□□□□ 0.04
BRCC3-201ENST00000330045 CATSPERZQ9NTU4 200 aa15.31■□□□□ 0.04
BRCC3-201ENST00000330045 CMTM6Q9NX76 183 aa15.31■□□□□ 0.04
BRCC3-201ENST00000330045 GMIPQ9P107 970 aa15.31■□□□□ 0.04
BRCC3-201ENST00000330045 ACTR3BQ9P1U1 418 aa15.31■□□□□ 0.04
BRCC3-201ENST00000330045 POLG2Q9UHN1 485 aa15.31■□□□□ 0.04
BRCC3-201ENST00000330045 PLXNA3P51805 1871 aa15.3■□□□□ 0.04
BRCC3-201ENST00000330045 FGF1P05230 155 aa15.3■□□□□ 0.04
BRCC3-201ENST00000330045 SLC6A2P23975 617 aa15.3■□□□□ 0.04
BRCC3-201ENST00000330045 PSMA4P25789 261 aaKnown RBP15.3■□□□□ 0.04
BRCC3-201ENST00000330045 CDK9P50750 372 aaKnown RBP15.3■□□□□ 0.04
BRCC3-201ENST00000330045 SERINC3Q13530 473 aa15.3■□□□□ 0.04
BRCC3-201ENST00000330045 TRIM71Q2Q1W2 868 aaKnown RBP15.3■□□□□ 0.04
BRCC3-201ENST00000330045 LCN8Q6JVE9 175 aa15.3■□□□□ 0.04
BRCC3-201ENST00000330045 BRSK1Q8TDC3 778 aa15.3■□□□□ 0.04
BRCC3-201ENST00000330045 DIS3LQ8TF46 1054 aaKnown RBP15.3■□□□□ 0.04
BRCC3-201ENST00000330045 ZNF296Q8WUU4 475 aaPredicted RBP15.3■□□□□ 0.04
BRCC3-201ENST00000330045 FEM1CQ96JP0 617 aa15.3■□□□□ 0.04
BRCC3-201ENST00000330045 AARSD1Q9BTE6 412 aaKnown RBP15.3■□□□□ 0.04
BRCC3-201ENST00000330045 BTRCQ9Y297 605 aa15.3■□□□□ 0.04
BRCC3-201ENST00000330045 TBX18O95935 607 aa15.29■□□□□ 0.04
BRCC3-201ENST00000330045 PIRTP0C851 137 aa15.29■□□□□ 0.04
BRCC3-201ENST00000330045 CDK4P11802 303 aa15.29■□□□□ 0.04
BRCC3-201ENST00000330045 OGNP20774 298 aaKnown RBP15.29■□□□□ 0.04
BRCC3-201ENST00000330045 FASP25445 335 aa15.29■□□□□ 0.04
BRCC3-201ENST00000330045 YBX1P67809 324 aaKnown RBP15.29■□□□□ 0.04
BRCC3-201ENST00000330045 CLCQ05315 142 aa15.29■□□□□ 0.04
BRCC3-201ENST00000330045 GALNT3Q14435 633 aa15.29■□□□□ 0.04
BRCC3-201ENST00000330045 LPCAT2Q7L5N7 544 aa15.29■□□□□ 0.04
BRCC3-201ENST00000330045 CIR1Q86X95 450 aaPredicted RBP15.29■□□□□ 0.04
BRCC3-201ENST00000330045 DCP1BQ8IZD4 617 aaKnown RBP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms