RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 LILRA2Q8N149 483 aa11.51□□□□□ -0.57
PTPN2-201ENST00000309660 PELI3Q8N2H9 469 aa11.51□□□□□ -0.57
PTPN2-201ENST00000309660 LPGAT1Q92604 370 aa11.51□□□□□ -0.57
PTPN2-201ENST00000309660 LRCH3Q96II8 777 aa11.51□□□□□ -0.57
PTPN2-201ENST00000309660 SLC30A3Q99726 388 aa11.51□□□□□ -0.57
PTPN2-201ENST00000309660 PDFQ9HBH1 243 aa11.51□□□□□ -0.57
PTPN2-201ENST00000309660 EGFL7Q9UHF1 273 aa11.51□□□□□ -0.57
PTPN2-201ENST00000309660 IKZF3Q9UKT9 509 aa11.51□□□□□ -0.57
PTPN2-201ENST00000309660 PCDHGA7Q9Y5G6 932 aa11.51□□□□□ -0.57
PTPN2-201ENST00000309660 MYOCOSA0A1B0GUC4 107 aa11.5□□□□□ -0.57
PTPN2-201ENST00000309660 PRRG1O14668 218 aa11.5□□□□□ -0.57
PTPN2-201ENST00000309660 SEC24AO95486 1093 aa11.5□□□□□ -0.57
PTPN2-201ENST00000309660 STAMBPO95630 424 aa11.5□□□□□ -0.57
PTPN2-201ENST00000309660 MBL2P11226 248 aaPredicted RBP11.5□□□□□ -0.57
PTPN2-201ENST00000309660 PRDX3P30048 256 aaKnown RBP11.5□□□□□ -0.57
PTPN2-201ENST00000309660 NOGQ13253 232 aa11.5□□□□□ -0.57
PTPN2-201ENST00000309660 GPNMBQ14956 572 aa11.5□□□□□ -0.57
PTPN2-201ENST00000309660 HERC3Q15034 1050 aa11.5□□□□□ -0.57
PTPN2-201ENST00000309660 LHX8Q68G74 356 aa11.5□□□□□ -0.57
PTPN2-201ENST00000309660 NAIF1Q69YI7 327 aaPredicted RBP11.5□□□□□ -0.57
PTPN2-201ENST00000309660 FBXL19Q6PCT2 694 aa11.5□□□□□ -0.57
PTPN2-201ENST00000309660 IYDQ6PHW0 289 aa11.5□□□□□ -0.57
PTPN2-201ENST00000309660 STAG3L4Q8TBR4 150 aa11.5□□□□□ -0.57
PTPN2-201ENST00000309660 CDK15Q96Q40 435 aa11.5□□□□□ -0.57
PTPN2-201ENST00000309660 ACOX2Q99424 681 aa11.5□□□□□ -0.57
PTPN2-201ENST00000309660 SLC25A23Q9BV35 468 aa11.5□□□□□ -0.57
PTPN2-201ENST00000309660 SPAG4Q9NPE6 437 aa11.5□□□□□ -0.57
PTPN2-201ENST00000309660 CD274Q9NZQ7 290 aa11.5□□□□□ -0.57
PTPN2-201ENST00000309660 CROTQ9UKG9 612 aa11.5□□□□□ -0.57
PTPN2-201ENST00000309660 AURKCQ9UQB9 309 aa11.5□□□□□ -0.57
PTPN2-201ENST00000309660 DOCK4Q8N1I0 1966 aa11.5□□□□□ -0.57
PTPN2-201ENST00000309660 ANGPT2O15123 496 aa11.5□□□□□ -0.57
PTPN2-201ENST00000309660 SNX2O60749 519 aa11.5□□□□□ -0.57
PTPN2-201ENST00000309660 ECI2O75521 394 aa11.5□□□□□ -0.57
PTPN2-201ENST00000309660 STC2O76061 302 aa11.5□□□□□ -0.57
PTPN2-201ENST00000309660 BAIAP3O94812 1187 aa11.5□□□□□ -0.57
PTPN2-201ENST00000309660 MTHFD2P13995 350 aa11.5□□□□□ -0.57
PTPN2-201ENST00000309660 ATP6V1B1P15313 513 aa11.5□□□□□ -0.57
PTPN2-201ENST00000309660 MZF1P28698 734 aaPredicted RBP11.5□□□□□ -0.57
PTPN2-201ENST00000309660 PLIN5Q00G26 463 aa11.5□□□□□ -0.57
PTPN2-201ENST00000309660 TIAL1Q01085 375 aaKnown RBP eCLIP11.5□□□□□ -0.57
PTPN2-201ENST00000309660 SATB1Q01826 763 aa11.5□□□□□ -0.57
PTPN2-201ENST00000309660 C6orf52Q5T4I8 152 aa11.5□□□□□ -0.57
PTPN2-201ENST00000309660 CPNE9Q8IYJ1 553 aa11.5□□□□□ -0.57
PTPN2-201ENST00000309660 SPATA17Q96L03 361 aa11.5□□□□□ -0.57
PTPN2-201ENST00000309660 MGME1Q9BQP7 344 aa11.5□□□□□ -0.57
PTPN2-201ENST00000309660 TRMOQ9BU70 441 aa11.5□□□□□ -0.57
PTPN2-201ENST00000309660 C1orf50Q9BV19 199 aa11.5□□□□□ -0.57
PTPN2-201ENST00000309660 PIF1Q9H611 641 aa11.5□□□□□ -0.57
PTPN2-201ENST00000309660 SYTL2Q9HCH5 934 aa11.5□□□□□ -0.57
PTPN2-201ENST00000309660 C6orf203Q9P0P8 240 aaPredicted RBP11.5□□□□□ -0.57
PTPN2-201ENST00000309660 TRMT6Q9UJA5 497 aaKnown RBP11.5□□□□□ -0.57
PTPN2-201ENST00000309660 CCDC160A6NGH7 325 aa11.5□□□□□ -0.57
PTPN2-201ENST00000309660 SLC22A2O15244 555 aa11.5□□□□□ -0.57
PTPN2-201ENST00000309660 TBL1XO60907 577 aa11.5□□□□□ -0.57
PTPN2-201ENST00000309660 CLDN11O75508 207 aa11.5□□□□□ -0.57
PTPN2-201ENST00000309660 RNASEH2AO75792 299 aaKnown RBP11.5□□□□□ -0.57
PTPN2-201ENST00000309660 ALPIP09923 528 aa11.5□□□□□ -0.57
PTPN2-201ENST00000309660 BMP1P13497 986 aa11.5□□□□□ -0.57
PTPN2-201ENST00000309660 NELFEP18615 380 aaKnown RBP11.5□□□□□ -0.57
PTPN2-201ENST00000309660 CES1P23141 567 aa11.5□□□□□ -0.57
PTPN2-201ENST00000309660 TUFMP49411 452 aaKnown RBP11.5□□□□□ -0.57
PTPN2-201ENST00000309660 RHOAP61586 193 aa11.5□□□□□ -0.57
PTPN2-201ENST00000309660 SMAD3P84022 425 aaKnown RBP11.5□□□□□ -0.57
PTPN2-201ENST00000309660 CLCQ05315 142 aa11.5□□□□□ -0.57
PTPN2-201ENST00000309660 GK3PQ14409 553 aa11.5□□□□□ -0.57
PTPN2-201ENST00000309660 AFTPHQ6ULP2 937 aa11.5□□□□□ -0.57
PTPN2-201ENST00000309660 CYHR1Q6ZMK1 362 aa11.5□□□□□ -0.57
PTPN2-201ENST00000309660 GPR63Q9BZJ6 419 aa11.5□□□□□ -0.57
PTPN2-201ENST00000309660 PDP2Q9P2J9 529 aa11.5□□□□□ -0.57
PTPN2-201ENST00000309660 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.49□□□□□ -0.57
PTPN2-201ENST00000309660 ZNF839A8K0R7 811 aa11.49□□□□□ -0.57
PTPN2-201ENST00000309660 PEX1O43933 1283 aa11.49□□□□□ -0.57
PTPN2-201ENST00000309660 BCAS2O75934 225 aaPredicted RBP11.49□□□□□ -0.57
PTPN2-201ENST00000309660 TMCC1O94876 653 aa11.49□□□□□ -0.57
PTPN2-201ENST00000309660 EPOP01588 193 aa11.49□□□□□ -0.57
PTPN2-201ENST00000309660 ETS2P15036 469 aa11.49□□□□□ -0.57
PTPN2-201ENST00000309660 LPOP22079 712 aaPredicted RBP11.49□□□□□ -0.57
PTPN2-201ENST00000309660 GKP32189 559 aa11.49□□□□□ -0.57
PTPN2-201ENST00000309660 DIO3P55073 304 aa11.49□□□□□ -0.57
PTPN2-201ENST00000309660 LAMB3Q13751 1172 aa11.49□□□□□ -0.57
PTPN2-201ENST00000309660 ADGRE1Q14246 886 aa11.49□□□□□ -0.57
PTPN2-201ENST00000309660 TRIM25Q14258 630 aaKnown RBP11.49□□□□□ -0.57
PTPN2-201ENST00000309660 TLR1Q15399 786 aa11.49□□□□□ -0.57
PTPN2-201ENST00000309660 SLC14A2Q15849 920 aa11.49□□□□□ -0.57
PTPN2-201ENST00000309660 USP41Q3LFD5 358 aa11.49□□□□□ -0.57
PTPN2-201ENST00000309660 FUT11Q495W5 492 aa11.49□□□□□ -0.57
PTPN2-201ENST00000309660 FOXB2Q5VYV0 432 aa11.49□□□□□ -0.57
PTPN2-201ENST00000309660 ANKS6Q68DC2 871 aa11.49□□□□□ -0.57
PTPN2-201ENST00000309660 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.49□□□□□ -0.57
PTPN2-201ENST00000309660 DIS3LQ8TF46 1054 aaKnown RBP11.49□□□□□ -0.57
PTPN2-201ENST00000309660 LRTOMTQ8WZ04 291 aa11.49□□□□□ -0.57
PTPN2-201ENST00000309660 LINGO1Q96FE5 620 aa11.49□□□□□ -0.57
PTPN2-201ENST00000309660 CAPNS2Q96L46 248 aa11.49□□□□□ -0.57
PTPN2-201ENST00000309660 TDRD1Q9BXT4 1180 aaKnown RBP11.49□□□□□ -0.57
PTPN2-201ENST00000309660 UNC93B1Q9H1C4 597 aa11.49□□□□□ -0.57
PTPN2-201ENST00000309660 PCDHGB4Q9UN71 923 aa11.49□□□□□ -0.57
PTPN2-201ENST00000309660 PCDHGB5Q9Y5G0 923 aa11.49□□□□□ -0.57
PTPN2-201ENST00000309660 C15orf38-AP3S2A0A0A6YYH1 394 aa11.49□□□□□ -0.57
PTPN2-201ENST00000309660 K7ERQ8 282 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms