RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 RBM48Q5RL73 367 aaKnown RBP10.85□□□□□ -0.67
ZNF558-201ENST00000301475 EFCAB12Q6NXP0 572 aa10.85□□□□□ -0.67
ZNF558-201ENST00000301475 RBM23Q86U06 439 aaKnown RBP10.85□□□□□ -0.67
ZNF558-201ENST00000301475 KIAA2013Q8IYS2 634 aa10.85□□□□□ -0.67
ZNF558-201ENST00000301475 LEMD2Q8NC56 503 aa10.85□□□□□ -0.67
ZNF558-201ENST00000301475 C2CD4AQ8NCU7 369 aaPredicted RBP10.85□□□□□ -0.67
ZNF558-201ENST00000301475 DPF3Q92784 378 aa10.85□□□□□ -0.67
ZNF558-201ENST00000301475 BIRC7Q96CA5 298 aa10.85□□□□□ -0.67
ZNF558-201ENST00000301475 TEX37Q96LM6 180 aa10.85□□□□□ -0.67
ZNF558-201ENST00000301475 C12orf42Q96LP6 360 aa10.85□□□□□ -0.67
ZNF558-201ENST00000301475 KCNA7Q96RP8 456 aa10.85□□□□□ -0.67
ZNF558-201ENST00000301475 NPY6RQ99463 290 aa10.85□□□□□ -0.67
ZNF558-201ENST00000301475 TOR3AQ9H497 397 aa10.85□□□□□ -0.67
ZNF558-201ENST00000301475 RNF19AQ9NV58 838 aa10.85□□□□□ -0.67
ZNF558-201ENST00000301475 PCDHB3Q9Y5E6 796 aa10.85□□□□□ -0.67
ZNF558-201ENST00000301475 LMO2P25791 158 aa10.85□□□□□ -0.67
ZNF558-201ENST00000301475 BMPR1AP36894 532 aa10.85□□□□□ -0.67
ZNF558-201ENST00000301475 NR4A2P43354 598 aa10.85□□□□□ -0.67
ZNF558-201ENST00000301475 POLD2P49005 469 aa10.85□□□□□ -0.67
ZNF558-201ENST00000301475 SLC12A2P55011 1212 aa10.85□□□□□ -0.67
ZNF558-201ENST00000301475 SH3BP2P78314 561 aa10.85□□□□□ -0.67
ZNF558-201ENST00000301475 IGBP1P78318 339 aa10.85□□□□□ -0.67
ZNF558-201ENST00000301475 FPGSQ05932 587 aa10.85□□□□□ -0.67
ZNF558-201ENST00000301475 SEMA3BQ13214 749 aa10.85□□□□□ -0.67
ZNF558-201ENST00000301475 ADPRMQ3LIE5 342 aa10.85□□□□□ -0.67
ZNF558-201ENST00000301475 PAGE2BQ5JRK9 111 aa10.85□□□□□ -0.67
ZNF558-201ENST00000301475 PAGE3Q5JUK9 113 aa10.85□□□□□ -0.67
ZNF558-201ENST00000301475 PCID2Q5JVF3 399 aa10.85□□□□□ -0.67
ZNF558-201ENST00000301475 ZNF678Q5SXM1 525 aa10.85□□□□□ -0.67
ZNF558-201ENST00000301475 ATAD3BQ5T9A4 648 aa10.85□□□□□ -0.67
ZNF558-201ENST00000301475 METTL7BQ6UX53 244 aa10.85□□□□□ -0.67
ZNF558-201ENST00000301475 KIAA0408Q6ZU52 694 aa10.85□□□□□ -0.67
ZNF558-201ENST00000301475 HFE2Q6ZVN8 426 aa10.85□□□□□ -0.67
ZNF558-201ENST00000301475 HOMEZQ8IX15 550 aa10.85□□□□□ -0.67
ZNF558-201ENST00000301475 DCP1BQ8IZD4 617 aaKnown RBP10.85□□□□□ -0.67
ZNF558-201ENST00000301475 ZCCHC7Q8N3Z6 543 aaKnown RBP10.85□□□□□ -0.67
ZNF558-201ENST00000301475 SLC2A14Q8TDB8 520 aa10.85□□□□□ -0.67
ZNF558-201ENST00000301475 SH3RF2Q8TEC5 729 aa10.85□□□□□ -0.67
ZNF558-201ENST00000301475 NT5C3BQ969T7 300 aa10.85□□□□□ -0.67
ZNF558-201ENST00000301475 TMBIM1Q969X1 311 aa10.85□□□□□ -0.67
ZNF558-201ENST00000301475 CCDC126Q96EE4 140 aa10.85□□□□□ -0.67
ZNF558-201ENST00000301475 OTUD5Q96G74 571 aa10.85□□□□□ -0.67
ZNF558-201ENST00000301475 TRIM54Q9BYV2 358 aa10.85□□□□□ -0.67
ZNF558-201ENST00000301475 FAM124BQ9H5Z6 455 aaPredicted RBP10.85□□□□□ -0.67
ZNF558-201ENST00000301475 RMND5AQ9H871 391 aa10.85□□□□□ -0.67
ZNF558-201ENST00000301475 HPS4Q9NQG7 708 aa10.85□□□□□ -0.67
ZNF558-201ENST00000301475 PRMT7Q9NVM4 692 aaPredicted RBP10.85□□□□□ -0.67
ZNF558-201ENST00000301475 THG1LQ9NWX6 298 aaKnown RBP10.85□□□□□ -0.67
ZNF558-201ENST00000301475 FBXO5Q9UKT4 447 aa10.85□□□□□ -0.67
ZNF558-201ENST00000301475 ATP11BQ9Y2G3 1177 aa10.85□□□□□ -0.67
ZNF558-201ENST00000301475 IFT52Q9Y366 437 aa10.85□□□□□ -0.67
ZNF558-201ENST00000301475 SNX10Q9Y5X0 201 aa10.85□□□□□ -0.67
ZNF558-201ENST00000301475 LOC285556D6RIA3 1793 aa10.85□□□□□ -0.67
ZNF558-201ENST00000301475 PLXNA1Q9UIW2 1896 aa10.85□□□□□ -0.67
ZNF558-201ENST00000301475 A0A087WZ62 844 aa10.84□□□□□ -0.67
ZNF558-201ENST00000301475 LRRC14BA6NHZ5 514 aa10.84□□□□□ -0.67
ZNF558-201ENST00000301475 DAB1O75553 588 aa10.84□□□□□ -0.67
ZNF558-201ENST00000301475 CAPN15O75808 1086 aa10.84□□□□□ -0.67
ZNF558-201ENST00000301475 LTA4HP09960 611 aaKnown RBP10.84□□□□□ -0.67
ZNF558-201ENST00000301475 PCNAP12004 261 aa10.84□□□□□ -0.67
ZNF558-201ENST00000301475 PCMT1P22061 227 aa10.84□□□□□ -0.67
ZNF558-201ENST00000301475 IST1P53990 364 aa10.84□□□□□ -0.67
ZNF558-201ENST00000301475 DIO3P55073 304 aa10.84□□□□□ -0.67
ZNF558-201ENST00000301475 TPI1P60174 286 aa10.84□□□□□ -0.67
ZNF558-201ENST00000301475 LSM3P62310 102 aaKnown RBP10.84□□□□□ -0.67
ZNF558-201ENST00000301475 POU4F1Q01851 419 aa10.84□□□□□ -0.67
ZNF558-201ENST00000301475 SLC13A2Q13183 592 aa10.84□□□□□ -0.67
ZNF558-201ENST00000301475 CAMK2BQ13554 666 aa10.84□□□□□ -0.67
ZNF558-201ENST00000301475 NFYCQ13952 458 aa10.84□□□□□ -0.67
ZNF558-201ENST00000301475 UNC50Q53HI1 259 aa10.84□□□□□ -0.67
ZNF558-201ENST00000301475 CATSPEREQ5SY80 951 aa10.84□□□□□ -0.67
ZNF558-201ENST00000301475 C6orf141Q5SZD1 244 aa10.84□□□□□ -0.67
ZNF558-201ENST00000301475 MFSD4BQ5TF39 518 aa10.84□□□□□ -0.67
ZNF558-201ENST00000301475 TMEM236Q5W0B7 351 aa10.84□□□□□ -0.67
ZNF558-201ENST00000301475 ANKRD34AQ69YU3 496 aa10.84□□□□□ -0.67
ZNF558-201ENST00000301475 DENND5AQ6IQ26 1287 aa10.84□□□□□ -0.67
ZNF558-201ENST00000301475 UGT3A1Q6NUS8 523 aa10.84□□□□□ -0.67
ZNF558-201ENST00000301475 C8orf59Q8N0T1 100 aaPredicted RBP10.84□□□□□ -0.67
ZNF558-201ENST00000301475 CLIP4Q8N3C7 705 aa10.84□□□□□ -0.67
ZNF558-201ENST00000301475 HDAC2Q92769 488 aaKnown RBP10.84□□□□□ -0.67
ZNF558-201ENST00000301475 BDH2Q9BUT1 245 aa10.84□□□□□ -0.67
ZNF558-201ENST00000301475 TUBB1Q9H4B7 451 aa10.84□□□□□ -0.67
ZNF558-201ENST00000301475 ALG9Q9H6U8 611 aa10.84□□□□□ -0.67
ZNF558-201ENST00000301475 TRPV5Q9NQA5 729 aa10.84□□□□□ -0.67
ZNF558-201ENST00000301475 SDR39U1Q9NRG7 319 aaPredicted RBP10.84□□□□□ -0.67
ZNF558-201ENST00000301475 EVLQ9UI08 416 aaPredicted RBP10.84□□□□□ -0.67
ZNF558-201ENST00000301475 TRHDEQ9UKU6 1024 aa10.84□□□□□ -0.67
ZNF558-201ENST00000301475 PDE10AQ9Y233 779 aa10.84□□□□□ -0.67
ZNF558-201ENST00000301475 GABARAPO95166 117 aa10.84□□□□□ -0.67
ZNF558-201ENST00000301475 MATN4O95460 622 aa10.84□□□□□ -0.67
ZNF558-201ENST00000301475 PTPRAP18433 802 aa10.84□□□□□ -0.67
ZNF558-201ENST00000301475 CHRNA4P43681 627 aa10.84□□□□□ -0.67
ZNF558-201ENST00000301475 NDUFV1P49821 464 aa10.84□□□□□ -0.67
ZNF558-201ENST00000301475 OR4D2P58180 307 aa10.84□□□□□ -0.67
ZNF558-201ENST00000301475 ECT2LQ008S8 904 aa10.84□□□□□ -0.67
ZNF558-201ENST00000301475 TNFAIP2Q03169 654 aa10.84□□□□□ -0.67
ZNF558-201ENST00000301475 AGAP9Q5VTM2 703 aa10.84□□□□□ -0.67
ZNF558-201ENST00000301475 BLOC1S3Q6QNY0 202 aa10.84□□□□□ -0.67
ZNF558-201ENST00000301475 STK32CQ86UX6 486 aa10.84□□□□□ -0.67
ZNF558-201ENST00000301475 RIMKLAQ8IXN7 391 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms