RNA–Protein interactions for RNA: ENST00000297668.10

CNTNAP3-201, Transcript of contactin associated protein like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTNAP3, Length 5,064 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3-201ENST00000297668 ACAT2Q9BWD1 397 aa16.75■□□□□ 0.27
CNTNAP3-201ENST00000297668 TRIT1Q9H3H1 467 aaKnown RBP16.75■□□□□ 0.27
CNTNAP3-201ENST00000297668 C12orf65Q9H3J6 166 aaKnown RBP16.75■□□□□ 0.27
CNTNAP3-201ENST00000297668 SOHLH2Q9NX45 425 aa16.75■□□□□ 0.27
CNTNAP3-201ENST00000297668 RAPGEFL1Q9UHV5 662 aa16.75■□□□□ 0.27
CNTNAP3-201ENST00000297668 RAB23Q9ULC3 237 aa16.75■□□□□ 0.27
CNTNAP3-201ENST00000297668 PCDHGC3Q9UN70 934 aa16.75■□□□□ 0.27
CNTNAP3-201ENST00000297668 SMIM35A0A1B0GVV1 85 aa16.75■□□□□ 0.27
CNTNAP3-201ENST00000297668 AP2A1O95782 977 aa16.75■□□□□ 0.27
CNTNAP3-201ENST00000297668 ADH1AP07327 375 aa16.75■□□□□ 0.27
CNTNAP3-201ENST00000297668 TRIM32Q13049 653 aa16.75■□□□□ 0.27
CNTNAP3-201ENST00000297668 ATG14Q6ZNE5 492 aa16.75■□□□□ 0.27
CNTNAP3-201ENST00000297668 SPPL2CQ8IUH8 684 aa16.75■□□□□ 0.27
CNTNAP3-201ENST00000297668 PCDHGA4Q9Y5G9 962 aa16.75■□□□□ 0.27
CNTNAP3-201ENST00000297668 LIN7AO14910 233 aaPredicted RBP16.75■□□□□ 0.27
CNTNAP3-201ENST00000297668 SLC28A2O43868 658 aa16.75■□□□□ 0.27
CNTNAP3-201ENST00000297668 CHRNGP07510 517 aa16.75■□□□□ 0.27
CNTNAP3-201ENST00000297668 JAM2P57087 298 aa16.75■□□□□ 0.27
CNTNAP3-201ENST00000297668 TAF10Q12962 218 aa16.75■□□□□ 0.27
CNTNAP3-201ENST00000297668 AARSD1Q9BTE6 412 aaKnown RBP16.75■□□□□ 0.27
CNTNAP3-201ENST00000297668 PCDHB1Q9Y5F3 818 aa16.75■□□□□ 0.27
CNTNAP3-201ENST00000297668 COL1A2P08123 1366 aa16.75■□□□□ 0.27
CNTNAP3-201ENST00000297668 A0A1W2PQH9 124 aa16.74■□□□□ 0.27
CNTNAP3-201ENST00000297668 MDM4O15151 490 aa16.74■□□□□ 0.27
CNTNAP3-201ENST00000297668 OR1D2P34982 312 aa16.74■□□□□ 0.27
CNTNAP3-201ENST00000297668 KIR3DL1P43629 444 aa16.74■□□□□ 0.27
CNTNAP3-201ENST00000297668 LIMK2P53671 638 aa16.74■□□□□ 0.27
CNTNAP3-201ENST00000297668 CCL23P55773 120 aa16.74■□□□□ 0.27
CNTNAP3-201ENST00000297668 OLR1P78380 273 aa16.74■□□□□ 0.27
CNTNAP3-201ENST00000297668 PARP15Q460N3 678 aa16.74■□□□□ 0.27
CNTNAP3-201ENST00000297668 LIN54Q6MZP7 749 aa16.74■□□□□ 0.27
CNTNAP3-201ENST00000297668 PGAM4Q8N0Y7 254 aa16.74■□□□□ 0.27
CNTNAP3-201ENST00000297668 OR4A15Q8NGL6 344 aa16.74■□□□□ 0.27
CNTNAP3-201ENST00000297668 LPGAT1Q92604 370 aa16.74■□□□□ 0.27
CNTNAP3-201ENST00000297668 TIFAQ96CG3 184 aa16.74■□□□□ 0.27
CNTNAP3-201ENST00000297668 LMAN2LQ9H0V9 348 aa16.74■□□□□ 0.27
CNTNAP3-201ENST00000297668 LRTM1Q9HBL6 345 aa16.74■□□□□ 0.27
CNTNAP3-201ENST00000297668 NDST3O95803 873 aa16.74■□□□□ 0.27
CNTNAP3-201ENST00000297668 TRBC1P01850 177 aa16.74■□□□□ 0.27
CNTNAP3-201ENST00000297668 ELFN1P0C7U0 828 aa16.74■□□□□ 0.27
CNTNAP3-201ENST00000297668 MANFP55145 182 aaKnown RBP16.74■□□□□ 0.27
CNTNAP3-201ENST00000297668 RGS1Q08116 209 aa16.74■□□□□ 0.27
CNTNAP3-201ENST00000297668 GRM3Q14832 879 aa16.74■□□□□ 0.27
CNTNAP3-201ENST00000297668 VSTM1Q6UX27 236 aa16.74■□□□□ 0.27
CNTNAP3-201ENST00000297668 C12orf50Q8NA57 414 aaPredicted RBP16.74■□□□□ 0.27
CNTNAP3-201ENST00000297668 TMEM138Q9NPI0 162 aa16.74■□□□□ 0.27
CNTNAP3-201ENST00000297668 LGALS13Q9UHV8 139 aa16.74■□□□□ 0.27
CNTNAP3-201ENST00000297668 ZNF490Q9ULM2 529 aaPredicted RBP16.74■□□□□ 0.27
CNTNAP3-201ENST00000297668 GNEQ9Y223 722 aaKnown RBP16.74■□□□□ 0.27
CNTNAP3-201ENST00000297668 SSNA1O43805 119 aa16.74■□□□□ 0.27
CNTNAP3-201ENST00000297668 CTSKP43235 329 aa16.74■□□□□ 0.27
CNTNAP3-201ENST00000297668 POLR2JP52435 117 aaKnown RBP16.74■□□□□ 0.27
CNTNAP3-201ENST00000297668 GPR158Q5T848 1215 aa16.74■□□□□ 0.27
CNTNAP3-201ENST00000297668 ANKRD22Q5VYY1 191 aa16.74■□□□□ 0.27
CNTNAP3-201ENST00000297668 C1orf127Q8N9H9 656 aa16.74■□□□□ 0.27
CNTNAP3-201ENST00000297668 MCFD2Q8NI22 146 aa16.74■□□□□ 0.27
CNTNAP3-201ENST00000297668 PIH1D2Q8WWB5 315 aa16.74■□□□□ 0.27
CNTNAP3-201ENST00000297668 SDCBP2Q9H190 292 aa16.74■□□□□ 0.27
CNTNAP3-201ENST00000297668 RPRD1BQ9NQG5 326 aaKnown RBP16.74■□□□□ 0.27
CNTNAP3-201ENST00000297668 COMMD9Q9P000 198 aa16.74■□□□□ 0.27
CNTNAP3-201ENST00000297668 EME2A4GXA9 379 aaPredicted RBP16.74■□□□□ 0.27
CNTNAP3-201ENST00000297668 DUSP28Q4G0W2 176 aa16.74■□□□□ 0.27
CNTNAP3-201ENST00000297668 DENND6AQ8IWF6 608 aa16.74■□□□□ 0.27
CNTNAP3-201ENST00000297668 CNTD1Q8N815 330 aa16.74■□□□□ 0.27
CNTNAP3-201ENST00000297668 HEXDCQ8WVB3 486 aa16.74■□□□□ 0.27
CNTNAP3-201ENST00000297668 BORCS5Q969J3 196 aa16.74■□□□□ 0.27
CNTNAP3-201ENST00000297668 RERGQ96A58 199 aaPredicted RBP16.74■□□□□ 0.27
CNTNAP3-201ENST00000297668 WDR12Q9GZL7 423 aaKnown RBP16.74■□□□□ 0.27
CNTNAP3-201ENST00000297668 PSMD11O00231 422 aa16.73■□□□□ 0.27
CNTNAP3-201ENST00000297668 IDH3BO43837 385 aa16.73■□□□□ 0.27
CNTNAP3-201ENST00000297668 FAM46CQ5VWP2 391 aa16.73■□□□□ 0.27
CNTNAP3-201ENST00000297668 TWIST2Q8WVJ9 160 aa16.73■□□□□ 0.27
CNTNAP3-201ENST00000297668 MFSD3Q96ES6 412 aa16.73■□□□□ 0.27
CNTNAP3-201ENST00000297668 GBA3Q9H227 469 aa16.73■□□□□ 0.27
CNTNAP3-201ENST00000297668 NEK6Q9HC98 313 aa16.73■□□□□ 0.27
CNTNAP3-201ENST00000297668 KCTD5Q9NXV2 234 aa16.73■□□□□ 0.27
CNTNAP3-201ENST00000297668 KIAA1522Q9P206 1035 aaPredicted RBP16.73■□□□□ 0.27
CNTNAP3-201ENST00000297668 TULP2O00295 520 aa16.73■□□□□ 0.27
CNTNAP3-201ENST00000297668 CDH3P22223 829 aa16.73■□□□□ 0.27
CNTNAP3-201ENST00000297668 HTR1BP28222 390 aa16.73■□□□□ 0.27
CNTNAP3-201ENST00000297668 ARPC4P59998 168 aa16.73■□□□□ 0.27
CNTNAP3-201ENST00000297668 INTS6LQ5JSJ4 861 aaKnown RBP16.73■□□□□ 0.27
CNTNAP3-201ENST00000297668 SLC25A24Q6NUK1 477 aa16.73■□□□□ 0.27
CNTNAP3-201ENST00000297668 CHSY3Q70JA7 882 aa16.73■□□□□ 0.27
CNTNAP3-201ENST00000297668 LRRC17Q8N6Y2 441 aa16.73■□□□□ 0.27
CNTNAP3-201ENST00000297668 DENND2DQ9H6A0 471 aaPredicted RBP16.73■□□□□ 0.27
CNTNAP3-201ENST00000297668 SSU72Q9NP77 194 aaKnown RBP16.73■□□□□ 0.27
CNTNAP3-201ENST00000297668 PNPLA8Q9NP80 782 aa16.73■□□□□ 0.27
CNTNAP3-201ENST00000297668 ACSS2Q9NR19 701 aa16.73■□□□□ 0.27
CNTNAP3-201ENST00000297668 TIMM22Q9Y584 194 aa16.73■□□□□ 0.27
CNTNAP3-201ENST00000297668 ITPKAP23677 461 aa16.73■□□□□ 0.27
CNTNAP3-201ENST00000297668 PTPN9P43378 593 aa16.73■□□□□ 0.27
CNTNAP3-201ENST00000297668 YBEYP58557 167 aaPredicted RBP16.73■□□□□ 0.27
CNTNAP3-201ENST00000297668 DUSP4Q13115 394 aa16.73■□□□□ 0.27
CNTNAP3-201ENST00000297668 CAPN13Q6MZZ7 669 aaPredicted RBP16.73■□□□□ 0.27
CNTNAP3-201ENST00000297668 LEMD2Q8NC56 503 aa16.73■□□□□ 0.27
CNTNAP3-201ENST00000297668 COX4I2Q96KJ9 171 aa16.73■□□□□ 0.27
CNTNAP3-201ENST00000297668 TTYH3Q9C0H2 523 aa16.73■□□□□ 0.27
CNTNAP3-201ENST00000297668 MBD2Q9UBB5 411 aa16.73■□□□□ 0.27
CNTNAP3-201ENST00000297668 KCNU1A8MYU2 1149 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms