RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 CLEC4DQ8WXI8 215 aa17.24■□□□□ 0.35
SHANK1-201ENST00000293441 TRIM38O00635 465 aa17.24■□□□□ 0.35
SHANK1-201ENST00000293441 PRMT5O14744 637 aaPredicted RBP17.24■□□□□ 0.35
SHANK1-201ENST00000293441 ICAM3P32942 547 aa17.24■□□□□ 0.35
SHANK1-201ENST00000293441 IGFALSP35858 605 aa17.24■□□□□ 0.35
SHANK1-201ENST00000293441 NRG1Q02297 640 aaPredicted RBP17.24■□□□□ 0.35
SHANK1-201ENST00000293441 SPANXN2Q5MJ10 180 aa17.24■□□□□ 0.35
SHANK1-201ENST00000293441 FAM98AQ8NCA5 519 aaKnown RBP17.24■□□□□ 0.35
SHANK1-201ENST00000293441 STK32AQ8WU08 396 aa17.24■□□□□ 0.35
SHANK1-201ENST00000293441 STYXQ8WUJ0 223 aa17.24■□□□□ 0.35
SHANK1-201ENST00000293441 ACSS2Q9NR19 701 aa17.24■□□□□ 0.35
SHANK1-201ENST00000293441 MGRN1O60291 552 aa17.24■□□□□ 0.35
SHANK1-201ENST00000293441 PKMP14618 531 aaKnown RBP17.24■□□□□ 0.35
SHANK1-201ENST00000293441 ZNF132P52740 706 aa17.24■□□□□ 0.35
SHANK1-201ENST00000293441 PDK4Q16654 411 aa17.24■□□□□ 0.35
SHANK1-201ENST00000293441 SLC44A4Q53GD3 710 aa17.24■□□□□ 0.35
SHANK1-201ENST00000293441 SLC25A24Q6NUK1 477 aa17.24■□□□□ 0.35
SHANK1-201ENST00000293441 RHOJQ9H4E5 214 aa17.24■□□□□ 0.35
SHANK1-201ENST00000293441 PTGFRNQ9P2B2 879 aa17.24■□□□□ 0.35
SHANK1-201ENST00000293441 EGFL7Q9UHF1 273 aa17.24■□□□□ 0.35
SHANK1-201ENST00000293441 SAMHD1Q9Y3Z3 626 aaKnown RBP17.24■□□□□ 0.35
SHANK1-201ENST00000293441 FAM155BO75949 473 aa17.24■□□□□ 0.35
SHANK1-201ENST00000293441 FSBPO95073 299 aa17.24■□□□□ 0.35
SHANK1-201ENST00000293441 CCNA2P20248 432 aa17.24■□□□□ 0.35
SHANK1-201ENST00000293441 NET1Q7Z628 596 aaPredicted RBP17.24■□□□□ 0.35
SHANK1-201ENST00000293441 PNPT1Q8TCS8 783 aaKnown RBP17.24■□□□□ 0.35
SHANK1-201ENST00000293441 SEMA3GQ9NS98 782 aa17.24■□□□□ 0.35
SHANK1-201ENST00000293441 PSMD13Q9UNM6 376 aa17.24■□□□□ 0.35
SHANK1-201ENST00000293441 TRAF6Q9Y4K3 522 aa17.24■□□□□ 0.35
SHANK1-201ENST00000293441 BCL9LQ86UU0 1499 aa17.23■□□□□ 0.35
SHANK1-201ENST00000293441 IQCMA0A1B0GVH7 501 aa17.23■□□□□ 0.35
SHANK1-201ENST00000293441 TP73O15350 636 aa17.23■□□□□ 0.35
SHANK1-201ENST00000293441 NDST3O95803 873 aa17.23■□□□□ 0.35
SHANK1-201ENST00000293441 TRBC1P01850 177 aa17.23■□□□□ 0.35
SHANK1-201ENST00000293441 GNA12Q03113 381 aa17.23■□□□□ 0.35
SHANK1-201ENST00000293441 CPTPQ5TA50 214 aa17.23■□□□□ 0.35
SHANK1-201ENST00000293441 VANGL1Q8TAA9 524 aaPredicted RBP17.23■□□□□ 0.35
SHANK1-201ENST00000293441 HERVK_113Q902F9 699 aa17.23■□□□□ 0.35
SHANK1-201ENST00000293441 Q96MT0 163 aa17.23■□□□□ 0.35
SHANK1-201ENST00000293441 SORCS3Q9UPU3 1222 aa17.23■□□□□ 0.35
SHANK1-201ENST00000293441 SLC22A3O75751 556 aa17.23■□□□□ 0.35
SHANK1-201ENST00000293441 NT5EP21589 574 aa17.23■□□□□ 0.35
SHANK1-201ENST00000293441 WARSP23381 471 aaKnown RBP17.23■□□□□ 0.35
SHANK1-201ENST00000293441 MAPKAPK2P49137 400 aa17.23■□□□□ 0.35
SHANK1-201ENST00000293441 GBE1Q04446 702 aa17.23■□□□□ 0.35
SHANK1-201ENST00000293441 NR1D2Q14995 579 aa17.23■□□□□ 0.35
SHANK1-201ENST00000293441 CUZD1Q86UP6 607 aa17.23■□□□□ 0.35
SHANK1-201ENST00000293441 PYROXD2Q8N2H3 581 aa17.23■□□□□ 0.35
SHANK1-201ENST00000293441 DPEP2Q9H4A9 486 aa17.23■□□□□ 0.35
SHANK1-201ENST00000293441 MRTO4Q9UKD2 239 aaKnown RBP17.23■□□□□ 0.35
SHANK1-201ENST00000293441 TOP3BO95985 862 aaKnown RBP17.23■□□□□ 0.35
SHANK1-201ENST00000293441 C8AP07357 584 aa17.23■□□□□ 0.35
SHANK1-201ENST00000293441 TOP3AQ13472 1001 aaPredicted RBP17.23■□□□□ 0.35
SHANK1-201ENST00000293441 CCL14Q16627 93 aa17.23■□□□□ 0.35
SHANK1-201ENST00000293441 STXBP5LQ9Y2K9 1186 aa17.23■□□□□ 0.35
SHANK1-201ENST00000293441 SNUPNO95149 360 aaKnown RBP17.23■□□□□ 0.35
SHANK1-201ENST00000293441 MATN4O95460 622 aa17.23■□□□□ 0.35
SHANK1-201ENST00000293441 ADSLP30566 484 aaPredicted RBP17.23■□□□□ 0.35
SHANK1-201ENST00000293441 LILRA4P59901 499 aa17.23■□□□□ 0.35
SHANK1-201ENST00000293441 TCAIMQ8N3R3 496 aa17.23■□□□□ 0.35
SHANK1-201ENST00000293441 RP9Q8TA86 221 aaKnown RBP17.23■□□□□ 0.35
SHANK1-201ENST00000293441 RPL10LQ96L21 214 aaKnown RBP17.23■□□□□ 0.35
SHANK1-201ENST00000293441 DHX33Q9H6R0 707 aaKnown RBP17.23■□□□□ 0.35
SHANK1-201ENST00000293441 PCDHGC4Q9Y5F7 938 aa17.23■□□□□ 0.35
SHANK1-201ENST00000293441 AKT2P31751 481 aa17.23■□□□□ 0.35
SHANK1-201ENST00000293441 CCNIQ14094 377 aa17.23■□□□□ 0.35
SHANK1-201ENST00000293441 UBXN2BQ14CS0 331 aa17.23■□□□□ 0.35
SHANK1-201ENST00000293441 MON1BQ7L1V2 547 aa17.23■□□□□ 0.35
SHANK1-201ENST00000293441 NEK6Q9HC98 313 aa17.23■□□□□ 0.35
SHANK1-201ENST00000293441 GGA2Q9UJY4 613 aa17.23■□□□□ 0.35
SHANK1-201ENST00000293441 PRAMEF1O95521 474 aa17.22■□□□□ 0.35
SHANK1-201ENST00000293441 CRHR2Q13324 411 aa17.22■□□□□ 0.35
SHANK1-201ENST00000293441 RHPN2P1A8MT19 583 aa17.22■□□□□ 0.35
SHANK1-201ENST00000293441 EOMESO95936 686 aa17.22■□□□□ 0.35
SHANK1-201ENST00000293441 LMO2P25791 158 aa17.22■□□□□ 0.35
SHANK1-201ENST00000293441 RHAGQ02094 409 aa17.22■□□□□ 0.35
SHANK1-201ENST00000293441 FUT2Q10981 343 aa17.22■□□□□ 0.35
SHANK1-201ENST00000293441 NDUFA9Q16795 377 aa17.22■□□□□ 0.35
SHANK1-201ENST00000293441 MZT2AQ6P582 158 aa17.22■□□□□ 0.35
SHANK1-201ENST00000293441 VITQ6UXI7 678 aa17.22■□□□□ 0.35
SHANK1-201ENST00000293441 TAC4Q86UU9 113 aa17.22■□□□□ 0.35
SHANK1-201ENST00000293441 SLC4A11Q8NBS3 891 aa17.22■□□□□ 0.35
SHANK1-201ENST00000293441 METTL21AQ8WXB1 218 aa17.22■□□□□ 0.35
SHANK1-201ENST00000293441 TSSK3Q96PN8 268 aa17.22■□□□□ 0.35
SHANK1-201ENST00000293441 NUAK2Q9H093 628 aa17.22■□□□□ 0.35
SHANK1-201ENST00000293441 DNAJC11Q9NVH1 559 aa17.22■□□□□ 0.35
SHANK1-201ENST00000293441 ERVW-1Q9UQF0 538 aa17.22■□□□□ 0.35
SHANK1-201ENST00000293441 A0A1B0GVM2 712 aa17.22■□□□□ 0.35
SHANK1-201ENST00000293441 TCAF2A6NFQ2 919 aa17.22■□□□□ 0.35
SHANK1-201ENST00000293441 CDH3P22223 829 aa17.22■□□□□ 0.35
SHANK1-201ENST00000293441 GRSF1Q12849 480 aaKnown RBP eCLIP17.22■□□□□ 0.35
SHANK1-201ENST00000293441 GPR21Q99679 349 aa17.22■□□□□ 0.35
SHANK1-201ENST00000293441 NPAS2Q99743 824 aa17.22■□□□□ 0.35
SHANK1-201ENST00000293441 CHRAC1Q9NRG0 131 aa17.22■□□□□ 0.35
SHANK1-201ENST00000293441 A0A087WXM4 84 aa17.22■□□□□ 0.35
SHANK1-201ENST00000293441 MYBPHLA2RUH7 354 aa17.22■□□□□ 0.35
SHANK1-201ENST00000293441 NAE1Q13564 534 aa17.22■□□□□ 0.35
SHANK1-201ENST00000293441 RNF43Q68DV7 783 aa17.22■□□□□ 0.35
SHANK1-201ENST00000293441 ZNF540Q8NDQ6 660 aa17.22■□□□□ 0.35
SHANK1-201ENST00000293441 DBF4BQ8NFT6 615 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms