RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 ZNF358Q9NW07 568 aa15.31■□□□□ 0.04
COPS3-201ENST00000268717 SLCO3A1Q9UIG8 710 aa15.31■□□□□ 0.04
COPS3-201ENST00000268717 FKBPLQ9UIM3 349 aa15.31■□□□□ 0.04
COPS3-201ENST00000268717 APPL1Q9UKG1 709 aa15.31■□□□□ 0.04
COPS3-201ENST00000268717 USH1CQ9Y6N9 552 aa15.31■□□□□ 0.04
COPS3-201ENST00000268717 F5P12259 2224 aa15.3■□□□□ 0.04
COPS3-201ENST00000268717 TSPAN11A1L157 253 aa15.3■□□□□ 0.04
COPS3-201ENST00000268717 KRBA1A5PL33 1030 aa15.3■□□□□ 0.04
COPS3-201ENST00000268717 CCT8L1PA6NM43 557 aa15.3■□□□□ 0.04
COPS3-201ENST00000268717 TARM1B6A8C7 271 aa15.3■□□□□ 0.04
COPS3-201ENST00000268717 G3V2L1 256 aa15.3■□□□□ 0.04
COPS3-201ENST00000268717 NFKBIAP25963 317 aa15.3■□□□□ 0.04
COPS3-201ENST00000268717 POLR2LP62875 67 aaKnown RBP15.3■□□□□ 0.04
COPS3-201ENST00000268717 CCDC15Q0P6D6 951 aa15.3■□□□□ 0.04
COPS3-201ENST00000268717 PEX6Q13608 980 aa15.3■□□□□ 0.04
COPS3-201ENST00000268717 ACCSLQ4AC99 568 aa15.3■□□□□ 0.04
COPS3-201ENST00000268717 ZDHHC20Q5W0Z9 365 aa15.3■□□□□ 0.04
COPS3-201ENST00000268717 LRRC8EQ6NSJ5 796 aa15.3■□□□□ 0.04
COPS3-201ENST00000268717 ZYG11AQ6WRX3 759 aa15.3■□□□□ 0.04
COPS3-201ENST00000268717 TPRG1Q6ZUI0 275 aa15.3■□□□□ 0.04
COPS3-201ENST00000268717 LYSMD3Q7Z3D4 306 aa15.3■□□□□ 0.04
COPS3-201ENST00000268717 TMEM151AQ8N4L1 468 aa15.3■□□□□ 0.04
COPS3-201ENST00000268717 PPP1R14CQ8TAE6 165 aa15.3■□□□□ 0.04
COPS3-201ENST00000268717 KCTD4Q8WVF5 259 aa15.3■□□□□ 0.04
COPS3-201ENST00000268717 C10orf82Q8WW14 230 aa15.3■□□□□ 0.04
COPS3-201ENST00000268717 SMIM14Q96QK8 99 aa15.3■□□□□ 0.04
COPS3-201ENST00000268717 OSBPL1AQ9BXW6 950 aa15.3■□□□□ 0.04
COPS3-201ENST00000268717 MRPL46Q9H2W6 279 aaKnown RBP15.3■□□□□ 0.04
COPS3-201ENST00000268717 KDM4CQ9H3R0 1056 aa15.3■□□□□ 0.04
COPS3-201ENST00000268717 GPAMQ9HCL2 828 aa15.3■□□□□ 0.04
COPS3-201ENST00000268717 CA14Q9ULX7 337 aa15.3■□□□□ 0.04
COPS3-201ENST00000268717 TICRRQ7Z2Z1 1910 aa15.29■□□□□ 0.04
COPS3-201ENST00000268717 CCDC189A1A4V9 331 aa15.29■□□□□ 0.04
COPS3-201ENST00000268717 TMEM114B3SHH9 223 aa15.29■□□□□ 0.04
COPS3-201ENST00000268717 TULP3O75386 442 aa15.29■□□□□ 0.04
COPS3-201ENST00000268717 NDUFS3O75489 264 aa15.29■□□□□ 0.04
COPS3-201ENST00000268717 LTA4HP09960 611 aaKnown RBP15.29■□□□□ 0.04
COPS3-201ENST00000268717 RALBP11234 206 aa15.29■□□□□ 0.04
COPS3-201ENST00000268717 SAT1P21673 171 aa15.29■□□□□ 0.04
COPS3-201ENST00000268717 HNF1BP35680 557 aa15.29■□□□□ 0.04
COPS3-201ENST00000268717 PPARGP37231 505 aaPredicted RBP15.29■□□□□ 0.04
COPS3-201ENST00000268717 ASPHQ12797 758 aa15.29■□□□□ 0.04
COPS3-201ENST00000268717 CWF19L1Q69YN2 538 aaKnown RBP15.29■□□□□ 0.04
COPS3-201ENST00000268717 TRIM68Q6AZZ1 485 aa15.29■□□□□ 0.04
COPS3-201ENST00000268717 KLC3Q6P597 504 aa15.29■□□□□ 0.04
COPS3-201ENST00000268717 VITQ6UXI7 678 aa15.29■□□□□ 0.04
COPS3-201ENST00000268717 GDPD4Q6W3E5 623 aa15.29■□□□□ 0.04
COPS3-201ENST00000268717 CCDC121Q6ZUS5 278 aa15.29■□□□□ 0.04
COPS3-201ENST00000268717 Q6ZVU0 165 aa15.29■□□□□ 0.04
COPS3-201ENST00000268717 TRPM8Q7Z2W7 1104 aa15.29■□□□□ 0.04
COPS3-201ENST00000268717 C10orf107Q8IVU9 208 aa15.29■□□□□ 0.04
COPS3-201ENST00000268717 NAT16Q8N8M0 369 aa15.29■□□□□ 0.04
COPS3-201ENST00000268717 CCT6BQ92526 530 aa15.29■□□□□ 0.04
COPS3-201ENST00000268717 NDNQ99608 321 aa15.29■□□□□ 0.04
COPS3-201ENST00000268717 HEPHQ9BQS7 1158 aa15.29■□□□□ 0.04
COPS3-201ENST00000268717 ECT2Q9H8V3 914 aa15.29■□□□□ 0.04
COPS3-201ENST00000268717 ARHGEF3Q9NR81 526 aa15.29■□□□□ 0.04
COPS3-201ENST00000268717 IGSF5Q9NSI5 407 aa15.29■□□□□ 0.04
COPS3-201ENST00000268717 OXSMQ9NWU1 459 aa15.29■□□□□ 0.04
COPS3-201ENST00000268717 RUVBL2Q9Y230 463 aaKnown RBP15.29■□□□□ 0.04
COPS3-201ENST00000268717 COL4A2P08572 1712 aa15.29■□□□□ 0.04
COPS3-201ENST00000268717 CACNA1HO95180 2353 aa15.29■□□□□ 0.04
COPS3-201ENST00000268717 KIF26AQ9ULI4 1882 aaPredicted RBP15.29■□□□□ 0.04
COPS3-201ENST00000268717 C1orf232A0A0U1RR37 186 aa15.28■□□□□ 0.04
COPS3-201ENST00000268717 TRIM13O60858 407 aa15.28■□□□□ 0.04
COPS3-201ENST00000268717 SNUPNO95149 360 aaKnown RBP15.28■□□□□ 0.04
COPS3-201ENST00000268717 RBP1P09455 135 aa15.28■□□□□ 0.04
COPS3-201ENST00000268717 ALPIP09923 528 aa15.28■□□□□ 0.04
COPS3-201ENST00000268717 MYL2P10916 166 aa15.28■□□□□ 0.04
COPS3-201ENST00000268717 ARSAP15289 507 aa15.28■□□□□ 0.04
COPS3-201ENST00000268717 CTPS1P17812 591 aa15.28■□□□□ 0.04
COPS3-201ENST00000268717 PSMC3P17980 439 aa15.28■□□□□ 0.04
COPS3-201ENST00000268717 AVPR2P30518 371 aa15.28■□□□□ 0.04
COPS3-201ENST00000268717 GKP32189 559 aa15.28■□□□□ 0.04
COPS3-201ENST00000268717 PTGER3P43115 390 aa15.28■□□□□ 0.04
COPS3-201ENST00000268717 CDKN2DP55273 166 aa15.28■□□□□ 0.04
COPS3-201ENST00000268717 IRX4P78413 519 aa15.28■□□□□ 0.04
COPS3-201ENST00000268717 PFKPQ01813 784 aa15.28■□□□□ 0.04
COPS3-201ENST00000268717 GRM2Q14416 872 aa15.28■□□□□ 0.04
COPS3-201ENST00000268717 ACAP2Q15057 778 aa15.28■□□□□ 0.04
COPS3-201ENST00000268717 PTPRNQ16849 979 aa15.28■□□□□ 0.04
COPS3-201ENST00000268717 GAB4Q2WGN9 574 aa15.28■□□□□ 0.04
COPS3-201ENST00000268717 LACTB2Q53H82 288 aaPredicted RBP15.28■□□□□ 0.04
COPS3-201ENST00000268717 LYPLAL1Q5VWZ2 237 aa15.28■□□□□ 0.04
COPS3-201ENST00000268717 GRAMD4Q6IC98 578 aa15.28■□□□□ 0.04
COPS3-201ENST00000268717 ZNF549Q6P9A3 640 aa15.28■□□□□ 0.04
COPS3-201ENST00000268717 LDB1Q86U70 411 aaPredicted RBP15.28■□□□□ 0.04
COPS3-201ENST00000268717 ZSWIM9Q86XI8 627 aa15.28■□□□□ 0.04
COPS3-201ENST00000268717 CRLF3Q8IUI8 442 aa15.28■□□□□ 0.04
COPS3-201ENST00000268717 FSTL5Q8N475 847 aaPredicted RBP15.28■□□□□ 0.04
COPS3-201ENST00000268717 EID2BQ96D98 161 aa15.28■□□□□ 0.04
COPS3-201ENST00000268717 TTC1Q99614 292 aa15.28■□□□□ 0.04
COPS3-201ENST00000268717 CCDC68Q9H2F9 335 aa15.28■□□□□ 0.04
COPS3-201ENST00000268717 ZDHHC6Q9H6R6 413 aa15.28■□□□□ 0.04
COPS3-201ENST00000268717 DEC1Q9P2X7 70 aa15.28■□□□□ 0.04
COPS3-201ENST00000268717 DKK3Q9UBP4 350 aa15.28■□□□□ 0.04
COPS3-201ENST00000268717 SLC30A1Q9Y6M5 507 aa15.28■□□□□ 0.04
COPS3-201ENST00000268717 TRBV5-4A0A0C4DH59 114 aa15.28■□□□□ 0.04
COPS3-201ENST00000268717 TRIM24O15164 1050 aa15.28■□□□□ 0.04
COPS3-201ENST00000268717 DCTN3O75935 186 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms