RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 PKP2Q99959 881 aa10.96□□□□□ -0.65
COPA-201ENST00000241704 MYOCQ99972 504 aa10.96□□□□□ -0.65
COPA-201ENST00000241704 TRIM39Q9HCM9 518 aa10.96□□□□□ -0.65
COPA-201ENST00000241704 GMIPQ9P107 970 aa10.96□□□□□ -0.65
COPA-201ENST00000241704 PTBP2Q9UKA9 531 aaKnown RBP10.96□□□□□ -0.65
COPA-201ENST00000241704 AKAP11Q9UKA4 1901 aa10.96□□□□□ -0.65
COPA-201ENST00000241704 FOXD2O60548 495 aaPredicted RBP10.96□□□□□ -0.66
COPA-201ENST00000241704 CFHP08603 1231 aa10.96□□□□□ -0.66
COPA-201ENST00000241704 CLK1P49759 484 aaKnown RBP10.96□□□□□ -0.66
COPA-201ENST00000241704 TCEA2Q15560 299 aa10.96□□□□□ -0.66
COPA-201ENST00000241704 SAMD4BQ5PRF9 694 aaKnown RBP10.96□□□□□ -0.66
COPA-201ENST00000241704 FAAH2Q6GMR7 532 aa10.96□□□□□ -0.66
COPA-201ENST00000241704 ATG14Q6ZNE5 492 aa10.96□□□□□ -0.66
COPA-201ENST00000241704 FAM124AQ86V42 546 aa10.96□□□□□ -0.66
COPA-201ENST00000241704 PGAM4Q8N0Y7 254 aa10.96□□□□□ -0.66
COPA-201ENST00000241704 CCDC185Q8N715 623 aa10.96□□□□□ -0.66
COPA-201ENST00000241704 QKIQ96PU8 341 aaKnown RBP eCLIP10.96□□□□□ -0.665e-8■■■■□ 20.4
COPA-201ENST00000241704 RNF38Q9H0F5 515 aa10.96□□□□□ -0.66
COPA-201ENST00000241704 NOL11Q9H8H0 719 aaKnown RBP10.96□□□□□ -0.66
COPA-201ENST00000241704 RABL2BQ9UNT1 228 aa10.96□□□□□ -0.66
COPA-201ENST00000241704 CHD4Q14839 1912 aa10.96□□□□□ -0.66
COPA-201ENST00000241704 A0A0U1RQF3 1178 aa10.96□□□□□ -0.66
COPA-201ENST00000241704 SLC18A2Q05940 514 aa10.96□□□□□ -0.66
COPA-201ENST00000241704 FBXO46Q6PJ61 603 aaPredicted RBP10.96□□□□□ -0.66
COPA-201ENST00000241704 TMEM26Q6ZUK4 368 aa10.96□□□□□ -0.66
COPA-201ENST00000241704 SLC15A3Q8IY34 581 aa10.96□□□□□ -0.66
COPA-201ENST00000241704 UBR7Q8N806 425 aa10.96□□□□□ -0.66
COPA-201ENST00000241704 POC5Q8NA72 575 aa10.96□□□□□ -0.66
COPA-201ENST00000241704 MCOLN3Q8TDD5 553 aa10.96□□□□□ -0.66
COPA-201ENST00000241704 OR8D1Q8WZ84 308 aa10.96□□□□□ -0.66
COPA-201ENST00000241704 KCNK13Q9HB14 408 aa10.96□□□□□ -0.66
COPA-201ENST00000241704 GLOD4Q9HC38 313 aa10.96□□□□□ -0.66
COPA-201ENST00000241704 TMEM9Q9P0T7 183 aa10.96□□□□□ -0.66
COPA-201ENST00000241704 VTI1BQ9UEU0 232 aa10.96□□□□□ -0.66
COPA-201ENST00000241704 EBF1Q9UH73 591 aa10.96□□□□□ -0.66
COPA-201ENST00000241704 SIX4Q9UIU6 781 aa10.96□□□□□ -0.66
COPA-201ENST00000241704 NHSQ6T4R5 1651 aa10.96□□□□□ -0.66
COPA-201ENST00000241704 A0A087X1B8 175 aa10.95□□□□□ -0.66
COPA-201ENST00000241704 AGRPO00253 132 aa10.95□□□□□ -0.66
COPA-201ENST00000241704 AMD1P17707 334 aa10.95□□□□□ -0.66
COPA-201ENST00000241704 CYP2A7P20853 494 aa10.95□□□□□ -0.66
COPA-201ENST00000241704 GPR1P46091 355 aa10.95□□□□□ -0.66
COPA-201ENST00000241704 IDH3AP50213 366 aa10.95□□□□□ -0.66
COPA-201ENST00000241704 PSME3P61289 254 aa10.95□□□□□ -0.66
COPA-201ENST00000241704 TGFBIQ15582 683 aa10.95□□□□□ -0.66
COPA-201ENST00000241704 CCDC85BQ15834 202 aaPredicted RBP10.95□□□□□ -0.66
COPA-201ENST00000241704 RAET1GQ6H3X3 334 aa10.95□□□□□ -0.66
COPA-201ENST00000241704 OR7A2PQ8NGA2 310 aa10.95□□□□□ -0.66
COPA-201ENST00000241704 EXOC2Q96KP1 924 aa10.95□□□□□ -0.66
COPA-201ENST00000241704 TBC1D3DA0A087WVF3 549 aa10.95□□□□□ -0.66
COPA-201ENST00000241704 TBC1D3IA0A087WXS9 549 aa10.95□□□□□ -0.66
COPA-201ENST00000241704 TBC1D3EA0A087X179 549 aa10.95□□□□□ -0.66
COPA-201ENST00000241704 TBC1D3KA0A087X1G2 549 aa10.95□□□□□ -0.66
COPA-201ENST00000241704 TBC1D3FA6NER0 549 aaPredicted RBP10.95□□□□□ -0.66
COPA-201ENST00000241704 CAPN14A8MX76 684 aa10.95□□□□□ -0.66
COPA-201ENST00000241704 TBC1D3LB9A6J9 549 aa10.95□□□□□ -0.66
COPA-201ENST00000241704 FAM47E-STBD1D6RA91 191 aa10.95□□□□□ -0.66
COPA-201ENST00000241704 H3BNH8 94 aa10.95□□□□□ -0.66
COPA-201ENST00000241704 TBC1D3HP0C7X1 549 aa10.95□□□□□ -0.66
COPA-201ENST00000241704 ATP6V1E1P36543 226 aa10.95□□□□□ -0.66
COPA-201ENST00000241704 PBX3P40426 434 aa10.95□□□□□ -0.66
COPA-201ENST00000241704 GJA9P57773 515 aa10.95□□□□□ -0.66
COPA-201ENST00000241704 GPX6P59796 221 aa10.95□□□□□ -0.66
COPA-201ENST00000241704 TBC1D3GQ6DHY5 549 aa10.95□□□□□ -0.66
COPA-201ENST00000241704 TBC1D3CQ6IPX1 549 aa10.95□□□□□ -0.66
COPA-201ENST00000241704 KCTD8Q6ZWB6 473 aa10.95□□□□□ -0.66
COPA-201ENST00000241704 MTSS1LQ765P7 747 aa10.95□□□□□ -0.66
COPA-201ENST00000241704 TBC1D3Q8IZP1 549 aaPredicted RBP10.95□□□□□ -0.66
COPA-201ENST00000241704 METTL25Q8N6Q8 603 aa10.95□□□□□ -0.66
COPA-201ENST00000241704 RAB2BQ8WUD1 216 aa10.95□□□□□ -0.66
COPA-201ENST00000241704 TMIGD2Q96BF3 282 aa10.95□□□□□ -0.66
COPA-201ENST00000241704 FUBP3Q96I24 572 aaKnown RBP eCLIP10.95□□□□□ -0.66
COPA-201ENST00000241704 LENG8Q96PV6 779 aaPredicted RBP10.95□□□□□ -0.66
COPA-201ENST00000241704 STRA6Q9BX79 667 aa10.95□□□□□ -0.66
COPA-201ENST00000241704 ELOVL6Q9H5J4 265 aa10.95□□□□□ -0.66
COPA-201ENST00000241704 CATSPERZQ9NTU4 200 aa10.95□□□□□ -0.66
COPA-201ENST00000241704 GDAP2Q9NXN4 497 aa10.95□□□□□ -0.66
COPA-201ENST00000241704 KIAA1522Q9P206 1035 aaPredicted RBP10.95□□□□□ -0.66
COPA-201ENST00000241704 ZNHIT2Q9UHR6 403 aa10.95□□□□□ -0.66
COPA-201ENST00000241704 NDRG2Q9UN36 371 aaKnown RBP10.95□□□□□ -0.66
COPA-201ENST00000241704 LRP5O75197 1615 aa10.95□□□□□ -0.66
COPA-201ENST00000241704 MAP1BP46821 2468 aaKnown RBP10.95□□□□□ -0.66
COPA-201ENST00000241704 IGKV6-21A0A0C4DH24 114 aa10.95□□□□□ -0.66
COPA-201ENST00000241704 A0A1W2PQ45 241 aaPredicted RBP10.95□□□□□ -0.66
COPA-201ENST00000241704 A0A1W2PQY0 241 aa10.95□□□□□ -0.66
COPA-201ENST00000241704 YJEFN3A6XGL0 299 aa10.95□□□□□ -0.66
COPA-201ENST00000241704 CENPXA8MT69 81 aa10.95□□□□□ -0.66
COPA-201ENST00000241704 LRIG2O94898 1065 aa10.95□□□□□ -0.66
COPA-201ENST00000241704 PABPC1P11940 636 aaKnown RBP10.95□□□□□ -0.66
COPA-201ENST00000241704 NAT1P18440 290 aa10.95□□□□□ -0.66
COPA-201ENST00000241704 ABCG1P45844 678 aa10.95□□□□□ -0.66
COPA-201ENST00000241704 WNT3AP56704 352 aa10.95□□□□□ -0.66
COPA-201ENST00000241704 COPZ1P61923 177 aa10.95□□□□□ -0.66
COPA-201ENST00000241704 PRSS55Q6UWB4 352 aaPredicted RBP10.95□□□□□ -0.66
COPA-201ENST00000241704 GPR180Q86V85 440 aa10.95□□□□□ -0.66
COPA-201ENST00000241704 MICU2Q8IYU8 434 aa10.95□□□□□ -0.66
COPA-201ENST00000241704 STK40Q8N2I9 435 aa10.95□□□□□ -0.66
COPA-201ENST00000241704 PCDH20Q8N6Y1 951 aaKnown RBP10.95□□□□□ -0.66
COPA-201ENST00000241704 PCDH19Q8TAB3 1148 aa10.95□□□□□ -0.66
COPA-201ENST00000241704 SDCBP2Q9H190 292 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms