RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 CNSTQ6PJW8 725 aa13.77□□□□□ -0.21
HCFC2-201ENST00000229330 SMG8Q8ND04 991 aaKnown RBP13.77□□□□□ -0.21
HCFC2-201ENST00000229330 GLIS2Q9BZE0 524 aaPredicted RBP13.77□□□□□ -0.21
HCFC2-201ENST00000229330 SLITRK2Q9H156 845 aa13.77□□□□□ -0.21
HCFC2-201ENST00000229330 TOR3AQ9H497 397 aa13.77□□□□□ -0.21
HCFC2-201ENST00000229330 TUT1Q9H6E5 874 aaKnown RBP13.77□□□□□ -0.21
HCFC2-201ENST00000229330 C9P02748 559 aa13.77□□□□□ -0.21
HCFC2-201ENST00000229330 ZNF286BP0CG31 522 aa13.77□□□□□ -0.21
HCFC2-201ENST00000229330 OR1E1P30953 314 aa13.77□□□□□ -0.21
HCFC2-201ENST00000229330 CYP2C18P33260 490 aa13.77□□□□□ -0.21
HCFC2-201ENST00000229330 MACC1Q6ZN28 852 aa13.77□□□□□ -0.21
HCFC2-201ENST00000229330 SLC35B2Q8TB61 432 aa13.77□□□□□ -0.21
HCFC2-201ENST00000229330 MED8Q96G25 268 aa13.77□□□□□ -0.21
HCFC2-201ENST00000229330 SMARCD1Q96GM5 515 aa13.77□□□□□ -0.21
HCFC2-201ENST00000229330 PANX1Q96RD7 426 aa13.77□□□□□ -0.21
HCFC2-201ENST00000229330 ARL15Q9NXU5 204 aa13.77□□□□□ -0.21
HCFC2-201ENST00000229330 AHSPQ9NZD4 102 aa13.77□□□□□ -0.21
HCFC2-201ENST00000229330 C9JVG2 144 aa13.77□□□□□ -0.21
HCFC2-201ENST00000229330 BCAS2O75934 225 aaPredicted RBP13.77□□□□□ -0.21
HCFC2-201ENST00000229330 AP2A2O94973 939 aa13.77□□□□□ -0.21
HCFC2-201ENST00000229330 CHRNGP07510 517 aa13.77□□□□□ -0.21
HCFC2-201ENST00000229330 TBX4P57082 545 aa13.77□□□□□ -0.21
HCFC2-201ENST00000229330 DAG1Q14118 895 aa13.77□□□□□ -0.21
HCFC2-201ENST00000229330 TMEM198Q66K66 360 aa13.77□□□□□ -0.21
HCFC2-201ENST00000229330 ERICH5Q6P6B1 374 aa13.77□□□□□ -0.21
HCFC2-201ENST00000229330 KLHL35Q6PF15 583 aa13.77□□□□□ -0.21
HCFC2-201ENST00000229330 FCGR1BQ92637 280 aa13.77□□□□□ -0.21
HCFC2-201ENST00000229330 UBIAD1Q9Y5Z9 338 aa13.77□□□□□ -0.21
HCFC2-201ENST00000229330 ILVBLA1L0T0 632 aa13.76□□□□□ -0.21
HCFC2-201ENST00000229330 STX16-NPEPL1H3BU86 382 aa13.76□□□□□ -0.21
HCFC2-201ENST00000229330 SEMA5AQ13591 1074 aa13.76□□□□□ -0.21
HCFC2-201ENST00000229330 TUBA3CQ13748 450 aa13.76□□□□□ -0.21
HCFC2-201ENST00000229330 CRY1Q16526 586 aa13.76□□□□□ -0.21
HCFC2-201ENST00000229330 ALFQ53S48 1182 aa13.76□□□□□ -0.21
HCFC2-201ENST00000229330 PRR23BQ6ZRT6 265 aa13.76□□□□□ -0.21
HCFC2-201ENST00000229330 C1GALT1C1Q96EU7 318 aa13.76□□□□□ -0.21
HCFC2-201ENST00000229330 OR52B2Q96RD2 323 aa13.76□□□□□ -0.21
HCFC2-201ENST00000229330 KCNS3Q9BQ31 491 aa13.76□□□□□ -0.21
HCFC2-201ENST00000229330 CHRAC1Q9NRG0 131 aa13.76□□□□□ -0.21
HCFC2-201ENST00000229330 GTF2A1LQ9UNN4 478 aa13.76□□□□□ -0.21
HCFC2-201ENST00000229330 MRPL42Q9Y6G3 142 aaKnown RBP13.76□□□□□ -0.21
HCFC2-201ENST00000229330 C4BPAP04003 597 aaKnown RBP13.76□□□□□ -0.21
HCFC2-201ENST00000229330 INSRRP14616 1297 aa13.76□□□□□ -0.21
HCFC2-201ENST00000229330 NRG1Q02297 640 aaPredicted RBP13.76□□□□□ -0.21
HCFC2-201ENST00000229330 DNASE1L3Q13609 305 aa13.76□□□□□ -0.21
HCFC2-201ENST00000229330 AKIRIN2Q53H80 203 aa13.76□□□□□ -0.21
HCFC2-201ENST00000229330 TREML1Q86YW5 311 aa13.76□□□□□ -0.21
HCFC2-201ENST00000229330 TRPV1Q8NER1 839 aa13.76□□□□□ -0.21
HCFC2-201ENST00000229330 CD101Q93033 1021 aa13.76□□□□□ -0.21
HCFC2-201ENST00000229330 FAIMQ9NVQ4 179 aa13.76□□□□□ -0.21
HCFC2-201ENST00000229330 ITM2BQ9Y287 266 aa13.76□□□□□ -0.21
HCFC2-201ENST00000229330 MFHAS1Q9Y4C4 1052 aa13.76□□□□□ -0.21
HCFC2-201ENST00000229330 ZNF536O15090 1300 aa13.76□□□□□ -0.21
HCFC2-201ENST00000229330 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.76□□□□□ -0.21
HCFC2-201ENST00000229330 SCELO95171 688 aa13.76□□□□□ -0.21
HCFC2-201ENST00000229330 NOS3P29474 1203 aa13.76□□□□□ -0.21
HCFC2-201ENST00000229330 HSF2Q03933 536 aa13.76□□□□□ -0.21
HCFC2-201ENST00000229330 RELL1Q8IUW5 271 aa13.76□□□□□ -0.21
HCFC2-201ENST00000229330 ZC3H7AQ8IWR0 971 aaKnown RBP13.76□□□□□ -0.21
HCFC2-201ENST00000229330 PHTF2Q8N3S3 785 aa13.76□□□□□ -0.21
HCFC2-201ENST00000229330 SERPINB11Q96P15 392 aa13.76□□□□□ -0.21
HCFC2-201ENST00000229330 TLR8Q9NR97 1041 aaKnown RBP13.76□□□□□ -0.21
HCFC2-201ENST00000229330 AASDHPPTQ9NRN7 309 aa13.76□□□□□ -0.21
HCFC2-201ENST00000229330 ADAMTS6Q9UKP5 1117 aa13.76□□□□□ -0.21
HCFC2-201ENST00000229330 PGRP06401 933 aa13.76□□□□□ -0.21
HCFC2-201ENST00000229330 RAP2AP10114 183 aa13.76□□□□□ -0.21
HCFC2-201ENST00000229330 TCF4P15884 667 aa13.76□□□□□ -0.21
HCFC2-201ENST00000229330 CD36P16671 472 aa13.76□□□□□ -0.21
HCFC2-201ENST00000229330 UGT2B15P54855 530 aa13.76□□□□□ -0.21
HCFC2-201ENST00000229330 RHDQ02161 417 aa13.76□□□□□ -0.21
HCFC2-201ENST00000229330 CCDC157Q569K6 752 aa13.76□□□□□ -0.21
HCFC2-201ENST00000229330 FSTL5Q8N475 847 aaPredicted RBP13.76□□□□□ -0.21
HCFC2-201ENST00000229330 COMMD9Q9P000 198 aa13.76□□□□□ -0.21
HCFC2-201ENST00000229330 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.75□□□□□ -0.21
HCFC2-201ENST00000229330 A0A1B0GVG6 124 aa13.75□□□□□ -0.21
HCFC2-201ENST00000229330 SLC15A5A6NIM6 579 aa13.75□□□□□ -0.21
HCFC2-201ENST00000229330 NOBOXO60393 691 aa13.75□□□□□ -0.21
HCFC2-201ENST00000229330 IFI30P13284 250 aa13.75□□□□□ -0.21
HCFC2-201ENST00000229330 GRK4P32298 578 aa13.75□□□□□ -0.21
HCFC2-201ENST00000229330 MATKP42679 507 aa13.75□□□□□ -0.21
HCFC2-201ENST00000229330 PSMD4P55036 377 aaKnown RBP13.75□□□□□ -0.21
HCFC2-201ENST00000229330 CCNIQ14094 377 aa13.75□□□□□ -0.21
HCFC2-201ENST00000229330 TLR1Q15399 786 aa13.75□□□□□ -0.21
HCFC2-201ENST00000229330 HECTD2Q5U5R9 776 aa13.75□□□□□ -0.21
HCFC2-201ENST00000229330 RIOX2Q8IUF8 465 aa13.75□□□□□ -0.21
HCFC2-201ENST00000229330 ZFP28Q8NHY6 868 aa13.75□□□□□ -0.21
HCFC2-201ENST00000229330 EEF1AKMT1Q8WVE0 214 aa13.75□□□□□ -0.21
HCFC2-201ENST00000229330 TMEM138Q9NPI0 162 aa13.75□□□□□ -0.21
HCFC2-201ENST00000229330 DNAJB9Q9UBS3 223 aa13.75□□□□□ -0.21
HCFC2-201ENST00000229330 TCRBV7S3A2A0A539 114 aa13.75□□□□□ -0.21
HCFC2-201ENST00000229330 RBM47A0AV96 593 aaKnown RBP13.75□□□□□ -0.21
HCFC2-201ENST00000229330 UBXN8O00124 270 aa13.75□□□□□ -0.21
HCFC2-201ENST00000229330 LYPLA2O95372 231 aa13.75□□□□□ -0.21
HCFC2-201ENST00000229330 ANXA5P08758 320 aa13.75□□□□□ -0.21
HCFC2-201ENST00000229330 STT3AP46977 705 aa13.75□□□□□ -0.21
HCFC2-201ENST00000229330 PTPRNQ16849 979 aa13.75□□□□□ -0.21
HCFC2-201ENST00000229330 OR8H3Q8N146 312 aa13.75□□□□□ -0.21
HCFC2-201ENST00000229330 C10orf53Q8N6V4 93 aa13.75□□□□□ -0.21
HCFC2-201ENST00000229330 SLC38A2Q96QD8 506 aa13.75□□□□□ -0.21
HCFC2-201ENST00000229330 AGAP2Q99490 1192 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms