RNA–Protein interactions for RNA: ENST00000075430.11

CTDP1-201, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CTDP1, Length 3,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-201ENST00000075430 PAAF1Q9BRP4 392 aa16.7■□□□□ 0.26
CTDP1-201ENST00000075430 C11orf84Q9BUA3 381 aaPredicted RBP16.7■□□□□ 0.26
CTDP1-201ENST00000075430 ABCB10Q9NRK6 738 aa16.7■□□□□ 0.26
CTDP1-201ENST00000075430 CD300AQ9UGN4 299 aa16.7■□□□□ 0.26
CTDP1-201ENST00000075430 VPS4AQ9UN37 437 aa16.7■□□□□ 0.26
CTDP1-201ENST00000075430 M0R3G1 203 aa16.69■□□□□ 0.26
CTDP1-201ENST00000075430 AZIN1O14977 448 aa16.69■□□□□ 0.26
CTDP1-201ENST00000075430 SERPINB7O75635 380 aa16.69■□□□□ 0.26
CTDP1-201ENST00000075430 CDK14O94921 469 aa16.69■□□□□ 0.26
CTDP1-201ENST00000075430 TGFBR1P36897 503 aa16.69■□□□□ 0.26
CTDP1-201ENST00000075430 HADHAP40939 763 aa16.69■□□□□ 0.26
CTDP1-201ENST00000075430 SIM2Q14190 667 aaPredicted RBP16.69■□□□□ 0.26
CTDP1-201ENST00000075430 KCTD11Q693B1 232 aa16.69■□□□□ 0.26
CTDP1-201ENST00000075430 RNF19BQ6ZMZ0 732 aa16.69■□□□□ 0.26
CTDP1-201ENST00000075430 RAB44Q7Z6P3 723 aaPredicted RBP16.69■□□□□ 0.26
CTDP1-201ENST00000075430 LINC00523Q86TU6 105 aa16.69■□□□□ 0.26
CTDP1-201ENST00000075430 WDR6Q9NNW5 1121 aaKnown RBP16.69■□□□□ 0.26
CTDP1-201ENST00000075430 LIMD1Q9UGP4 676 aa16.69■□□□□ 0.26
CTDP1-201ENST00000075430 ZMYM5Q9UJ78 669 aa16.69■□□□□ 0.26
CTDP1-201ENST00000075430 AAR2Q9Y312 384 aaKnown RBP16.69■□□□□ 0.26
CTDP1-201ENST00000075430 JAK1P23458 1154 aa16.69■□□□□ 0.26
CTDP1-201ENST00000075430 PSMB9P28065 219 aa16.69■□□□□ 0.26
CTDP1-201ENST00000075430 TPTEP56180 551 aa16.69■□□□□ 0.26
CTDP1-201ENST00000075430 RFTN1Q14699 578 aaPredicted RBP16.69■□□□□ 0.26
CTDP1-201ENST00000075430 SPCS2Q15005 226 aa16.69■□□□□ 0.26
CTDP1-201ENST00000075430 GLYATQ6IB77 296 aa16.69■□□□□ 0.26
CTDP1-201ENST00000075430 DSG4Q86SJ6 1040 aa16.69■□□□□ 0.26
CTDP1-201ENST00000075430 SLCO6A1Q86UG4 719 aa16.69■□□□□ 0.26
CTDP1-201ENST00000075430 ADGRG5Q8IZF4 528 aa16.69■□□□□ 0.26
CTDP1-201ENST00000075430 PELI3Q8N2H9 469 aa16.69■□□□□ 0.26
CTDP1-201ENST00000075430 OR13C4Q8NGS5 318 aa16.69■□□□□ 0.26
CTDP1-201ENST00000075430 PSMA8Q8TAA3 256 aa16.69■□□□□ 0.26
CTDP1-201ENST00000075430 DQX1Q8TE96 717 aaKnown RBP16.69■□□□□ 0.26
CTDP1-201ENST00000075430 NRBF2Q96F24 287 aa16.69■□□□□ 0.26
CTDP1-201ENST00000075430 NSMCE2Q96MF7 247 aa16.69■□□□□ 0.26
CTDP1-201ENST00000075430 C17orf80Q9BSJ5 609 aa16.69■□□□□ 0.26
CTDP1-201ENST00000075430 DNAI2Q9GZS0 605 aa16.69■□□□□ 0.26
CTDP1-201ENST00000075430 COL11A1P12107 1806 aaPredicted RBP16.69■□□□□ 0.26
CTDP1-201ENST00000075430 CCDC154A6NI56 674 aa16.69■□□□□ 0.26
CTDP1-201ENST00000075430 H0Y858 1186 aa16.69■□□□□ 0.26
CTDP1-201ENST00000075430 TCF3P15923 654 aa16.69■□□□□ 0.26
CTDP1-201ENST00000075430 PRKAA2P54646 552 aa16.69■□□□□ 0.26
CTDP1-201ENST00000075430 SLC13A2Q13183 592 aa16.69■□□□□ 0.26
CTDP1-201ENST00000075430 UNC50Q53HI1 259 aa16.69■□□□□ 0.26
CTDP1-201ENST00000075430 PAQR9Q6ZVX9 377 aa16.69■□□□□ 0.26
CTDP1-201ENST00000075430 MIB1Q86YT6 1006 aa16.69■□□□□ 0.26
CTDP1-201ENST00000075430 ARRDC4Q8NCT1 418 aa16.69■□□□□ 0.26
CTDP1-201ENST00000075430 TMEM40Q8WWA1 233 aa16.69■□□□□ 0.26
CTDP1-201ENST00000075430 BIRC7Q96CA5 298 aa16.69■□□□□ 0.26
CTDP1-201ENST00000075430 GSTO2Q9H4Y5 243 aa16.69■□□□□ 0.26
CTDP1-201ENST00000075430 VRTNQ9H8Y1 702 aa16.69■□□□□ 0.26
CTDP1-201ENST00000075430 VPS28Q9UK41 221 aa16.69■□□□□ 0.26
CTDP1-201ENST00000075430 FBXW11Q9UKB1 542 aa16.69■□□□□ 0.26
CTDP1-201ENST00000075430 TRHDEQ9UKU6 1024 aa16.69■□□□□ 0.26
CTDP1-201ENST00000075430 BAG5Q9UL15 447 aa16.69■□□□□ 0.26
CTDP1-201ENST00000075430 SNX5Q9Y5X3 404 aa16.69■□□□□ 0.26
CTDP1-201ENST00000075430 J3KR12 359 aa16.68■□□□□ 0.26
CTDP1-201ENST00000075430 TREHO43280 583 aa16.68■□□□□ 0.26
CTDP1-201ENST00000075430 COQ9O75208 318 aa16.68■□□□□ 0.26
CTDP1-201ENST00000075430 INMTO95050 263 aa16.68■□□□□ 0.26
CTDP1-201ENST00000075430 HOXD12P35452 270 aa16.68■□□□□ 0.26
CTDP1-201ENST00000075430 PCYT1AP49585 367 aa16.68■□□□□ 0.26
CTDP1-201ENST00000075430 IL5RAQ01344 420 aa16.68■□□□□ 0.26
CTDP1-201ENST00000075430 UNC93AQ86WB7 457 aa16.68■□□□□ 0.26
CTDP1-201ENST00000075430 CLYBLQ8N0X4 340 aa16.68■□□□□ 0.26
CTDP1-201ENST00000075430 TTC39CQ8N584 583 aa16.68■□□□□ 0.26
CTDP1-201ENST00000075430 TRPV3Q8NET8 790 aa16.68■□□□□ 0.26
CTDP1-201ENST00000075430 SNX27Q96L92 541 aa16.68■□□□□ 0.26
CTDP1-201ENST00000075430 BIRC8Q96P09 236 aa16.68■□□□□ 0.26
CTDP1-201ENST00000075430 GAD1Q99259 594 aa16.68■□□□□ 0.26
CTDP1-201ENST00000075430 SMOQ99835 787 aa16.68■□□□□ 0.26
CTDP1-201ENST00000075430 KIFC1Q9BW19 673 aa16.68■□□□□ 0.26
CTDP1-201ENST00000075430 SPC25Q9HBM1 224 aa16.68■□□□□ 0.26
CTDP1-201ENST00000075430 ARL5AQ9Y689 179 aa16.68■□□□□ 0.26
CTDP1-201ENST00000075430 PHIPQ8WWQ0 1821 aa16.68■□□□□ 0.26
CTDP1-201ENST00000075430 LSM1O15116 133 aaKnown RBP16.68■□□□□ 0.26
CTDP1-201ENST00000075430 NPHS1O60500 1241 aa16.68■□□□□ 0.26
CTDP1-201ENST00000075430 RBP1P09455 135 aa16.68■□□□□ 0.26
CTDP1-201ENST00000075430 TUBA4AP68366 448 aa16.68■□□□□ 0.26
CTDP1-201ENST00000075430 GTF2H3Q13889 308 aa16.68■□□□□ 0.26
CTDP1-201ENST00000075430 UGT3A2Q3SY77 523 aa16.68■□□□□ 0.26
CTDP1-201ENST00000075430 CYBRD1Q53TN4 286 aa16.68■□□□□ 0.26
CTDP1-201ENST00000075430 TMBIM1Q969X1 311 aa16.68■□□□□ 0.26
CTDP1-201ENST00000075430 SENP8Q96LD8 212 aa16.68■□□□□ 0.26
CTDP1-201ENST00000075430 SLC30A3Q99726 388 aa16.68■□□□□ 0.26
CTDP1-201ENST00000075430 NEURL2Q9BR09 285 aa16.68■□□□□ 0.26
CTDP1-201ENST00000075430 FEM1AQ9BSK4 669 aa16.68■□□□□ 0.26
CTDP1-201ENST00000075430 AMBNQ9NP70 447 aa16.68■□□□□ 0.26
CTDP1-201ENST00000075430 CRTAC1Q9NQ79 661 aa16.68■□□□□ 0.26
CTDP1-201ENST00000075430 IPO11Q9UI26 975 aaKnown RBP16.68■□□□□ 0.26
CTDP1-201ENST00000075430 RNF112Q9ULX5 631 aa16.68■□□□□ 0.26
CTDP1-201ENST00000075430 ACTL7AQ9Y615 435 aa16.68■□□□□ 0.26
CTDP1-201ENST00000075430 KRBA1A5PL33 1030 aa16.67■□□□□ 0.26
CTDP1-201ENST00000075430 MYO1GB0I1T2 1018 aa16.67■□□□□ 0.26
CTDP1-201ENST00000075430 IDUAP35475 653 aa16.67■□□□□ 0.26
CTDP1-201ENST00000075430 DAOAP59103 153 aa16.67■□□□□ 0.26
CTDP1-201ENST00000075430 VBP1P61758 197 aa16.67■□□□□ 0.26
CTDP1-201ENST00000075430 PFKPQ01813 784 aa16.67■□□□□ 0.26
CTDP1-201ENST00000075430 CCDC92Q53HC0 331 aaPredicted RBP16.67■□□□□ 0.26
CTDP1-201ENST00000075430 CYHR1Q6ZMK1 362 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms