RNA–Protein interactions for RNA: ENSMUST00000182047.1

Rnf4-204, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,944 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-204ENSMUST00000182047 Dpy19l2P0CW70 773 aa13.4□□□□□ -0.26
Rnf4-204ENSMUST00000182047 SpnP15702 395 aa13.4□□□□□ -0.26
Rnf4-204ENSMUST00000182047 Kpna2P52293 529 aaKnown RBP13.4□□□□□ -0.26
Rnf4-204ENSMUST00000182047 Cdh5P55284 784 aa13.4□□□□□ -0.26
Rnf4-204ENSMUST00000182047 Ncf4P97369 339 aa13.4□□□□□ -0.26
Rnf4-204ENSMUST00000182047 Foxj1Q61660 421 aa13.4□□□□□ -0.26
Rnf4-204ENSMUST00000182047 Shc2Q8BMC3 573 aa13.4□□□□□ -0.26
Rnf4-204ENSMUST00000182047 Gpr21Q8BX79 349 aa13.4□□□□□ -0.26
Rnf4-204ENSMUST00000182047 Clptm1lQ8BXA5 539 aa13.4□□□□□ -0.26
Rnf4-204ENSMUST00000182047 Sit1Q8C503 180 aa13.4□□□□□ -0.26
Rnf4-204ENSMUST00000182047 MfrpQ8K480 584 aa13.4□□□□□ -0.26
Rnf4-204ENSMUST00000182047 Wnt9aQ8R5M2 365 aa13.4□□□□□ -0.26
Rnf4-204ENSMUST00000182047 Olfr697Q8VFM4 317 aa13.4□□□□□ -0.26
Rnf4-204ENSMUST00000182047 Tspan11Q9D1D1 253 aa13.4□□□□□ -0.26
Rnf4-204ENSMUST00000182047 Tmem80Q9D3H0 123 aa13.4□□□□□ -0.26
Rnf4-204ENSMUST00000182047 Ampd2Q9DBT5 798 aa13.4□□□□□ -0.26
Rnf4-204ENSMUST00000182047 RhojQ9ER71 214 aa13.4□□□□□ -0.26
Rnf4-204ENSMUST00000182047 Ppp2r3cQ9JK24 453 aa13.4□□□□□ -0.26
Rnf4-204ENSMUST00000182047 RlfA2A7F4 1918 aa13.4□□□□□ -0.26
Rnf4-204ENSMUST00000182047 Kcng1A2BDX4 514 aa13.4□□□□□ -0.26
Rnf4-204ENSMUST00000182047 Spin2dB1B0R2 236 aa13.4□□□□□ -0.26
Rnf4-204ENSMUST00000182047 Ankrd34aB2RW11 495 aa13.4□□□□□ -0.26
Rnf4-204ENSMUST00000182047 Gm43302L7N1X8 611 aa13.4□□□□□ -0.26
Rnf4-204ENSMUST00000182047 Psmc3O88685 442 aa13.4□□□□□ -0.26
Rnf4-204ENSMUST00000182047 AladP10518 330 aa13.4□□□□□ -0.26
Rnf4-204ENSMUST00000182047 Gbp10Q000W5 611 aa13.4□□□□□ -0.26
Rnf4-204ENSMUST00000182047 Enpp3Q6DYE8 874 aa13.4□□□□□ -0.26
Rnf4-204ENSMUST00000182047 Rpl10Q6ZWV3 214 aaKnown RBP13.4□□□□□ -0.26
Rnf4-204ENSMUST00000182047 Mtmr12Q80TA6 747 aa13.4□□□□□ -0.26
Rnf4-204ENSMUST00000182047 OsgepQ8BWU5 335 aa13.4□□□□□ -0.26
Rnf4-204ENSMUST00000182047 NeproQ8R2U2 564 aa13.4□□□□□ -0.26
Rnf4-204ENSMUST00000182047 KmoQ91WN4 479 aa13.4□□□□□ -0.26
Rnf4-204ENSMUST00000182047 Mrpl57Q9CQF8 102 aaKnown RBP13.4□□□□□ -0.26
Rnf4-204ENSMUST00000182047 Echdc3Q9D7J9 300 aa13.4□□□□□ -0.26
Rnf4-204ENSMUST00000182047 Smad9Q9JIW5 430 aa13.4□□□□□ -0.26
Rnf4-204ENSMUST00000182047 Ruvbl2Q9WTM5 463 aaKnown RBP13.4□□□□□ -0.26
Rnf4-204ENSMUST00000182047 RecqlQ9Z129 648 aa13.4□□□□□ -0.26
Rnf4-204ENSMUST00000182047 UprtB1AVZ0 310 aa13.4□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Zfp651E9PZ11 729 aa13.4□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Vmn1r76F8VQ63 324 aa13.4□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Vmn1r176G3UW31 304 aa13.4□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Arfip1G5E8V9 373 aa13.4□□□□□ -0.27
Rnf4-204ENSMUST00000182047 MntO08789 591 aa13.4□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Pik3cdO35904 1043 aa13.4□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Ldb2O55203 373 aa13.4□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Msr1P30204 458 aaKnown RBP13.4□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Cyb5r2Q3KNK3 276 aa13.4□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Gpatch4Q3TFK5 415 aaKnown RBP13.4□□□□□ -0.27
Rnf4-204ENSMUST00000182047 HiraQ61666 1015 aa13.4□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Brsk2Q69Z98 735 aa13.4□□□□□ -0.27
Rnf4-204ENSMUST00000182047 MylipQ8BM54 445 aa13.4□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Dennd1cQ8CFK6 786 aa13.4□□□□□ -0.27
Rnf4-204ENSMUST00000182047 BfarQ8R079 450 aa13.4□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Tcf25Q8R3L2 676 aaKnown RBP13.4□□□□□ -0.27
Rnf4-204ENSMUST00000182047 VitQ8VHI5 650 aa13.4□□□□□ -0.27
Rnf4-204ENSMUST00000182047 SardhQ99LB7 919 aa13.4□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Ttc30bQ9CY00 664 aa13.4□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Tbc1d20Q9D9I4 402 aa13.4□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Chek2Q9Z265 546 aa13.4□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Rp1l1Q8CGM2 1859 aa13.39□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Gm20828J3KMI7 228 aa13.39□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Neu1O35657 409 aa13.39□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Cldn2O88552 230 aa13.39□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Hmx2P43687 273 aa13.39□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Tead2P48301 445 aa13.39□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Atp6v0d1P51863 351 aa13.39□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Arf5P84084 180 aaKnown RBP13.39□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Gjb5Q02739 271 aa13.39□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Gdf3Q07104 366 aa13.39□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Eps8Q08509 821 aa13.39□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Cntn4Q69Z26 1026 aa13.39□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Q6GQU0 248 aa13.39□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Ints7Q7TQK1 966 aaKnown RBP13.39□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Sel1l3Q80TS8 1137 aa13.39□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Atp2c1Q80XR2 918 aa13.39□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Gxylt2Q810K9 444 aa13.39□□□□□ -0.27
Rnf4-204ENSMUST00000182047 ChfrQ810L3 664 aa13.39□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Elmo2Q8BHL5 732 aa13.39□□□□□ -0.27
Rnf4-204ENSMUST00000182047 PigwQ8C398 503 aa13.39□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Serpinb10Q8K1K6 397 aa13.39□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Rnf111Q99ML9 989 aa13.39□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Tma16Q9CR02 221 aaKnown RBP13.39□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Rnf146Q9CZW6 359 aa13.39□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Ten1Q9D7K2 161 aa13.39□□□□□ -0.27
Rnf4-204ENSMUST00000182047 P2yr13Q9D8I2 337 aa13.39□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Paqr5Q9DCU0 330 aa13.39□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Pias4Q9JM05 507 aa13.39□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Rps6ka2Q9WUT3 733 aa13.39□□□□□ -0.27
Rnf4-204ENSMUST00000182047 H2afb2S4R1M3 115 aa13.39□□□□□ -0.27
Rnf4-204ENSMUST00000182047 PtprdQ64487 1912 aa13.39□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Map7d3A2AEY4 876 aa13.39□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Klhl32A2AJX0 620 aa13.39□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Mkrn2osD3Z393 217 aa13.39□□□□□ -0.27
Rnf4-204ENSMUST00000182047 P01668 110 aa13.39□□□□□ -0.27
Rnf4-204ENSMUST00000182047 PrnpP04925 254 aa13.39□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Man1a1P45700 655 aa13.39□□□□□ -0.27
Rnf4-204ENSMUST00000182047 IdsQ08890 552 aa13.39□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Ptchd3Q0EEE2 906 aa13.39□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Hsdl2Q2TPA8 490 aaKnown RBP13.39□□□□□ -0.27
Rnf4-204ENSMUST00000182047 Trafd1Q3UDK1 580 aa13.39□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 19.5 ms