RNA–Protein interactions for RNA: ENSMUST00000071057.13

Ddx55-201, Transcript of ATP-dependent RNA helicase DDX55, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddx55, Length 2,799 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55-201ENSMUST00000071057 Ofcc1Q8BGX4 166 aa11.35□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Gfm2Q8R2Q4 779 aa11.35□□□□□ -0.59
Ddx55-201ENSMUST00000071057 NvlQ9DBY8 855 aaKnown RBP11.35□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Ntn4Q9JI33 628 aa11.35□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Xlr4bQ9JJQ7 215 aa11.35□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Mpp6Q9JLB0 553 aa11.35□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Tpk1Q9R0M5 243 aa11.35□□□□□ -0.59
Ddx55-201ENSMUST00000071057 HephQ9Z0Z4 1157 aa11.35□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Col5a3Q9JLI2 1739 aa11.35□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Zfc3h1B2RT41 1992 aaKnown RBP11.35□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Tex13aA2AFS9 377 aa11.34□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Olfr1160A2AVT0 319 aa11.34□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Rabgap1lA6H6A9 815 aa11.34□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Gm10406A6NAS4 205 aa11.34□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Gm3373A6NAS7 205 aa11.34□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Zbed5B2RPU8 756 aa11.34□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Gm3298E9PW80 205 aa11.34□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Gm2237E9Q501 211 aa11.34□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Gm11397F6V5V4 377 aa11.34□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Cyp2j12G3UXT0 502 aa11.34□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Gm10338K7N692 204 aa11.34□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Gm3591K7N6X2 186 aa11.34□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Gm3667K7N757 205 aa11.34□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Prkar1bP12849 381 aa11.34□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Gdf5P43027 495 aa11.34□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Atp5bP56480 529 aaKnown RBP11.34□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Gpr85P60894 370 aa11.34□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Gabrb3P63080 473 aa11.34□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Mpp1P70290 466 aa11.34□□□□□ -0.59
Ddx55-201ENSMUST00000071057 March5Q3KNM2 278 aa11.34□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Hhla1Q3TYV2 514 aa11.34□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Smu1Q3UKJ7 513 aaKnown RBP11.34□□□□□ -0.59
Ddx55-201ENSMUST00000071057 EndouQ3V188 412 aa11.34□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Afap1l2Q5DTU0 825 aa11.34□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Gm3558Q5FWC9 205 aa11.34□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Slc6a4Q60857 630 aa11.34□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Lcp1Q61233 627 aaKnown RBP11.34□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Lcn3Q62471 182 aa11.34□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Abhd10Q6PE15 297 aa11.34□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Methig1Q76I26 264 aa11.34□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Defb34Q7TNV8 81 aa11.34□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Noc4lQ8BHY2 516 aa11.34□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Fbxo30Q8BJL1 746 aa11.34□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Smoc2Q8CD91 447 aa11.34□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Ugt2b1Q8R084 529 aa11.34□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Serpinb9gQ8VHQ1 377 aa11.34□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Oas1dQ8VI95 361 aa11.34□□□□□ -0.59
Ddx55-201ENSMUST00000071057 March2Q99M02 246 aa11.34□□□□□ -0.59
Ddx55-201ENSMUST00000071057 PompQ9CQT5 141 aa11.34□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Retreg3Q9CQV4 466 aa11.34□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Fkbp9Q9Z247 570 aa11.34□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Gm14496K7N5U4 849 aa11.34□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Pik3r2O08908 722 aa11.34□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Tnfrsf9P20334 256 aa11.34□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Ccnd1P25322 295 aa11.34□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Stt3aP46978 705 aa11.34□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Krt6aP50446 553 aa11.34□□□□□ -0.59
Ddx55-201ENSMUST00000071057 AxlQ00993 888 aa11.34□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Eml1Q05BC3 814 aa11.34□□□□□ -0.59
Ddx55-201ENSMUST00000071057 1700061G19RikQ08EE8 705 aa11.34□□□□□ -0.59
Ddx55-201ENSMUST00000071057 HdxQ14B70 692 aa11.34□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Agap2Q3UHD9 1186 aa11.34□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Q3UK37 420 aa11.34□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Gm8773Q3UQ24 132 aa11.34□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Fam120bQ6RI63 786 aa11.34□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Olfm2Q8BM13 448 aa11.34□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Ccdc184Q8BMK5 191 aa11.34□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Rmnd1Q8CI78 450 aa11.34□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Q8CIL4 281 aa11.34□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Rnf208Q8K0W3 265 aa11.34□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Eml3Q8VC03 897 aa11.34□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Rprd1bQ9CSU0 326 aaKnown RBP11.34□□□□□ -0.59
Ddx55-201ENSMUST00000071057 DtnaQ9D2N4 746 aa11.34□□□□□ -0.59
Ddx55-201ENSMUST00000071057 CabyrQ9D424 453 aa11.34□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Spesp1Q9D5A0 399 aa11.34□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Efcab9Q9DAM2 216 aa11.34□□□□□ -0.59
Ddx55-201ENSMUST00000071057 RalbQ9JIW9 206 aa11.34□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Ap4b1Q9WV76 738 aa11.34□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Ism1A2ATD1 454 aa11.33□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Olfr310B2RVZ1 332 aa11.33□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Osbpl8B9EJ86 889 aa11.33□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Olfr600E9PUN7 314 aa11.33□□□□□ -0.59
Ddx55-201ENSMUST00000071057 BC049352E9Q2Z6 85 aa11.33□□□□□ -0.59
Ddx55-201ENSMUST00000071057 MttpO08601 894 aa11.33□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Hps1O08983 704 aa11.33□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Hmga1P17095 107 aaKnown RBP11.33□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Lhx3P50481 400 aa11.33□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Hoxd1Q01822 328 aa11.33□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Zyg11bQ3UFS0 744 aa11.33□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Snx21Q3UR97 363 aa11.33□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Grik1Q60934 836 aa11.33□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Galnt10Q6P9S7 603 aa11.33□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Olfr538Q7TRT5 310 aa11.33□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Pcid2Q8BFV2 399 aaKnown RBP11.33□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Msantd1Q8BIL2 278 aa11.33□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Slc41a1Q8BJA2 512 aa11.33□□□□□ -0.59
Ddx55-201ENSMUST00000071057 BoraQ8BS90 525 aa11.33□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Ttc24Q8BYG0 334 aa11.33□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Strip2Q8C9H6 844 aa11.33□□□□□ -0.59
Ddx55-201ENSMUST00000071057 Hpf1Q8CFE2 346 aa11.33□□□□□ -0.59
Retrieved 100 of 22,080 RNA–protein pairs in 27.8 ms