RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 B3GALT6Q96L58 329 aa17.54■□□□□ 0.4
SCARB2-223ENST00000640640 ABCG8Q9H221 673 aa17.54■□□□□ 0.4
SCARB2-223ENST00000640640 CORO1CQ9ULV4 474 aaPredicted RBP17.54■□□□□ 0.4
SCARB2-223ENST00000640640 MAPRE3Q9UPY8 281 aa17.54■□□□□ 0.4
SCARB2-223ENST00000640640 CPQQ9Y646 472 aa17.54■□□□□ 0.4
SCARB2-223ENST00000640640 OCM2P0CE71 109 aa17.54■□□□□ 0.4
SCARB2-223ENST00000640640 OCMP0CE72 109 aaPredicted RBP17.54■□□□□ 0.4
SCARB2-223ENST00000640640 TNK2Q07912 1038 aa17.54■□□□□ 0.4
SCARB2-223ENST00000640640 PDK3Q15120 406 aa17.54■□□□□ 0.4
SCARB2-223ENST00000640640 DCBLD1Q8N8Z6 715 aa17.54■□□□□ 0.4
SCARB2-223ENST00000640640 TCF12Q99081 682 aa17.54■□□□□ 0.4
SCARB2-223ENST00000640640 SMOQ99835 787 aa17.54■□□□□ 0.4
SCARB2-223ENST00000640640 CNTN6Q9UQ52 1028 aa17.54■□□□□ 0.4
SCARB2-223ENST00000640640 C4BP0C0L5 1744 aa17.53■□□□□ 0.4
SCARB2-223ENST00000640640 GRM6O15303 877 aa17.53■□□□□ 0.4
SCARB2-223ENST00000640640 HSMCR30P0CW71 290 aa17.53■□□□□ 0.4
SCARB2-223ENST00000640640 SLC1A2P43004 574 aa17.53■□□□□ 0.4
SCARB2-223ENST00000640640 SLC18A1P54219 525 aa17.53■□□□□ 0.4
SCARB2-223ENST00000640640 GRIP2Q9C0E4 1043 aa17.53■□□□□ 0.4
SCARB2-223ENST00000640640 TAS2R1Q9NYW7 299 aa17.53■□□□□ 0.4
SCARB2-223ENST00000640640 C9IYK1 514 aa17.53■□□□□ 0.4
SCARB2-223ENST00000640640 PRAMEF1O95521 474 aa17.53■□□□□ 0.4
SCARB2-223ENST00000640640 GJA9P57773 515 aa17.53■□□□□ 0.4
SCARB2-223ENST00000640640 UBE2R2Q712K3 238 aaPredicted RBP17.53■□□□□ 0.4
SCARB2-223ENST00000640640 PQLC3Q8N755 202 aa17.53■□□□□ 0.4
SCARB2-223ENST00000640640 QRFPRQ96P65 431 aa17.53■□□□□ 0.4
SCARB2-223ENST00000640640 PSMD13Q9UNM6 376 aa17.53■□□□□ 0.4
SCARB2-223ENST00000640640 NCKAP1Q9Y2A7 1128 aa17.53■□□□□ 0.4
SCARB2-223ENST00000640640 PIRO00625 290 aa17.53■□□□□ 0.4
SCARB2-223ENST00000640640 RPS24P62847 133 aaKnown RBP17.53■□□□□ 0.4
SCARB2-223ENST00000640640 LSM12Q3MHD2 195 aaKnown RBP17.53■□□□□ 0.4
SCARB2-223ENST00000640640 CSGALNACT1Q8TDX6 532 aa17.53■□□□□ 0.4
SCARB2-223ENST00000640640 C2orf15Q8WU43 125 aaKnown RBP17.53■□□□□ 0.4
SCARB2-223ENST00000640640 TWIST2Q8WVJ9 160 aa17.53■□□□□ 0.4
SCARB2-223ENST00000640640 SCLYQ96I15 445 aa17.53■□□□□ 0.4
SCARB2-223ENST00000640640 PIWIL1Q96J94 861 aaKnown RBP17.53■□□□□ 0.4
SCARB2-223ENST00000640640 DCUN1D5Q9BTE7 237 aa17.53■□□□□ 0.4
SCARB2-223ENST00000640640 RERGLQ9H628 205 aa17.53■□□□□ 0.4
SCARB2-223ENST00000640640 CDH22Q9UJ99 828 aa17.53■□□□□ 0.4
SCARB2-223ENST00000640640 IGKV6D-21A0A0A0MT36 114 aa17.52■□□□□ 0.4
SCARB2-223ENST00000640640 STBD1O95210 358 aa17.52■□□□□ 0.4
SCARB2-223ENST00000640640 MLLT6P55198 1093 aaPredicted RBP17.52■□□□□ 0.4
SCARB2-223ENST00000640640 TMEM63BQ5T3F8 832 aa17.52■□□□□ 0.4
SCARB2-223ENST00000640640 INTS11Q5TA45 600 aaKnown RBP17.52■□□□□ 0.4
SCARB2-223ENST00000640640 MFSD4BQ5TF39 518 aa17.52■□□□□ 0.4
SCARB2-223ENST00000640640 PPP4R4Q6NUP7 873 aa17.52■□□□□ 0.4
SCARB2-223ENST00000640640 SPESP1Q6UW49 350 aa17.52■□□□□ 0.4
SCARB2-223ENST00000640640 RINLQ6ZS11 566 aa17.52■□□□□ 0.4
SCARB2-223ENST00000640640 GPR156Q8NFN8 814 aa17.52■□□□□ 0.4
SCARB2-223ENST00000640640 OR52E6Q96RD3 313 aa17.52■□□□□ 0.4
SCARB2-223ENST00000640640 HOPXQ9BPY8 73 aaPredicted RBP17.52■□□□□ 0.4
SCARB2-223ENST00000640640 FAM192AQ9GZU8 254 aa17.52■□□□□ 0.4
SCARB2-223ENST00000640640 NMUR1Q9HB89 426 aa17.52■□□□□ 0.4
SCARB2-223ENST00000640640 PCDH12Q9NPG4 1184 aa17.52■□□□□ 0.4
SCARB2-223ENST00000640640 BBIP1A8MTZ0 92 aa17.52■□□□□ 0.4
SCARB2-223ENST00000640640 CRATP43155 626 aa17.52■□□□□ 0.4
SCARB2-223ENST00000640640 UBE3AQ05086 875 aa17.52■□□□□ 0.4
SCARB2-223ENST00000640640 CACNG1Q06432 222 aa17.52■□□□□ 0.4
SCARB2-223ENST00000640640 EPS8Q12929 822 aa17.52■□□□□ 0.4
SCARB2-223ENST00000640640 GSTA3Q16772 222 aa17.52■□□□□ 0.4
SCARB2-223ENST00000640640 ATAD3BQ5T9A4 648 aa17.52■□□□□ 0.4
SCARB2-223ENST00000640640 TTC23Q5W5X9 447 aa17.52■□□□□ 0.4
SCARB2-223ENST00000640640 KRT78Q8N1N4 520 aa17.52■□□□□ 0.4
SCARB2-223ENST00000640640 ASZ1Q8WWH4 475 aa17.52■□□□□ 0.4
SCARB2-223ENST00000640640 TSEN34Q9BSV6 310 aaKnown RBP17.52■□□□□ 0.4
SCARB2-223ENST00000640640 KCTD5Q9NXV2 234 aa17.52■□□□□ 0.4
SCARB2-223ENST00000640640 PRRC2BQ5JSZ5 2229 aaKnown RBP17.52■□□□□ 0.4
SCARB2-223ENST00000640640 FAM159BA6NKW6 160 aa17.52■□□□□ 0.4
SCARB2-223ENST00000640640 KRT20P35900 424 aa17.52■□□□□ 0.4
SCARB2-223ENST00000640640 RXRGP48443 463 aa17.52■□□□□ 0.4
SCARB2-223ENST00000640640 CXCR3P49682 368 aa17.52■□□□□ 0.4
SCARB2-223ENST00000640640 AP1S1P61966 158 aa17.52■□□□□ 0.4
SCARB2-223ENST00000640640 LCP2Q13094 533 aa17.52■□□□□ 0.4
SCARB2-223ENST00000640640 FGD3Q5JSP0 725 aa17.52■□□□□ 0.4
SCARB2-223ENST00000640640 CES5AQ6NT32 575 aa17.52■□□□□ 0.4
SCARB2-223ENST00000640640 FBXL22Q6P050 247 aa17.52■□□□□ 0.4
SCARB2-223ENST00000640640 WDTC1Q8N5D0 677 aa17.52■□□□□ 0.4
SCARB2-223ENST00000640640 C10orf82Q8WW14 230 aa17.52■□□□□ 0.4
SCARB2-223ENST00000640640 PANX1Q96RD7 426 aa17.52■□□□□ 0.4
SCARB2-223ENST00000640640 RAD21L1Q9H4I0 556 aa17.52■□□□□ 0.4
SCARB2-223ENST00000640640 TBC1D14Q9P2M4 693 aa17.52■□□□□ 0.4
SCARB2-223ENST00000640640 TPRKBQ9Y3C4 175 aa17.52■□□□□ 0.4
SCARB2-223ENST00000640640 POLR3HQ9Y535 204 aaPredicted RBP17.52■□□□□ 0.4
SCARB2-223ENST00000640640 IGKV6-21A0A0C4DH24 114 aa17.52■□□□□ 0.39
SCARB2-223ENST00000640640 FAM20BO75063 409 aa17.52■□□□□ 0.39
SCARB2-223ENST00000640640 PGM3O95394 542 aa17.52■□□□□ 0.39
SCARB2-223ENST00000640640 HLA-DQB2P05538 268 aa17.52■□□□□ 0.39
SCARB2-223ENST00000640640 CXCR2P25025 360 aa17.52■□□□□ 0.39
SCARB2-223ENST00000640640 SPAM1P38567 509 aa17.52■□□□□ 0.39
SCARB2-223ENST00000640640 CLCQ05315 142 aa17.52■□□□□ 0.39
SCARB2-223ENST00000640640 SLC10A7Q0GE19 358 aa17.52■□□□□ 0.39
SCARB2-223ENST00000640640 AP5B1Q2VPB7 878 aa17.52■□□□□ 0.39
SCARB2-223ENST00000640640 CTU1Q7Z7A3 348 aaKnown RBP17.52■□□□□ 0.39
SCARB2-223ENST00000640640 RBM23Q86U06 439 aaKnown RBP17.52■□□□□ 0.39
SCARB2-223ENST00000640640 RORBQ92753 470 aa17.52■□□□□ 0.39
SCARB2-223ENST00000640640 TIFAQ96CG3 184 aa17.52■□□□□ 0.39
SCARB2-223ENST00000640640 CADM1Q9BY67 442 aaKnown RBP17.52■□□□□ 0.39
SCARB2-223ENST00000640640 DDX18Q9NVP1 670 aaKnown RBP17.52■□□□□ 0.39
SCARB2-223ENST00000640640 FKBPLQ9UIM3 349 aa17.52■□□□□ 0.39
SCARB2-223ENST00000640640 DUSP12Q9UNI6 340 aa17.52■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms