RNA–Protein interactions for RNA: ENST00000640131.1

SPIN3-236, Transcript of spindlin family member 3, humanhuman

TSL 1 (best)

Gene SPIN3, Length 2,938 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-236ENST00000640131 CLLU1OSQ5K130 101 aa12.39□□□□□ -0.43
SPIN3-236ENST00000640131 PERM1Q5SV97 790 aa12.39□□□□□ -0.43
SPIN3-236ENST00000640131 FSTL4Q6MZW2 842 aa12.39□□□□□ -0.43
SPIN3-236ENST00000640131 FAM171BQ6P995 826 aa12.39□□□□□ -0.43
SPIN3-236ENST00000640131 PDZD4Q76G19 769 aaPredicted RBP12.39□□□□□ -0.43
SPIN3-236ENST00000640131 SCD5Q86SK9 330 aa12.39□□□□□ -0.43
SPIN3-236ENST00000640131 SETD3Q86TU7 594 aaPredicted RBP12.39□□□□□ -0.43
SPIN3-236ENST00000640131 KCNMB4Q86W47 210 aa12.39□□□□□ -0.43
SPIN3-236ENST00000640131 CRLF3Q8IUI8 442 aa12.39□□□□□ -0.43
SPIN3-236ENST00000640131 DENND6AQ8IWF6 608 aa12.39□□□□□ -0.43
SPIN3-236ENST00000640131 CCDC28AQ8IWP9 274 aa12.39□□□□□ -0.43
SPIN3-236ENST00000640131 THEM5Q8N1Q8 247 aa12.39□□□□□ -0.43
SPIN3-236ENST00000640131 HERVK_113Q902F9 699 aa12.39□□□□□ -0.43
SPIN3-236ENST00000640131 NTAN1Q96AB6 310 aa12.39□□□□□ -0.43
SPIN3-236ENST00000640131 ALPK1Q96QP1 1244 aa12.39□□□□□ -0.43
SPIN3-236ENST00000640131 TDRD1Q9BXT4 1180 aaKnown RBP12.39□□□□□ -0.43
SPIN3-236ENST00000640131 STMN3Q9NZ72 180 aa12.39□□□□□ -0.43
SPIN3-236ENST00000640131 SCAMP3O14828 347 aaKnown RBP12.38□□□□□ -0.43
SPIN3-236ENST00000640131 IGHA2P01877 340 aa12.38□□□□□ -0.43
SPIN3-236ENST00000640131 ALOX5P09917 674 aa12.38□□□□□ -0.43
SPIN3-236ENST00000640131 GRK2P25098 689 aa12.38□□□□□ -0.43
SPIN3-236ENST00000640131 MLLT3P42568 568 aaPredicted RBP12.38□□□□□ -0.43
SPIN3-236ENST00000640131 EPHB1P54762 984 aa12.38□□□□□ -0.43
SPIN3-236ENST00000640131 EFEMP1Q12805 493 aa12.38□□□□□ -0.43
SPIN3-236ENST00000640131 PGS1Q32NB8 556 aa12.38□□□□□ -0.43
SPIN3-236ENST00000640131 STEAP4Q687X5 459 aa12.38□□□□□ -0.43
SPIN3-236ENST00000640131 FTHL17Q9BXU8 183 aa12.38□□□□□ -0.43
SPIN3-236ENST00000640131 PCM1Q15154 2024 aa12.38□□□□□ -0.43
SPIN3-236ENST00000640131 ANKRD12Q6UB98 2062 aa12.38□□□□□ -0.43
SPIN3-236ENST00000640131 CDH23Q9H251 3354 aa12.38□□□□□ -0.43
SPIN3-236ENST00000640131 C1orf232A0A0U1RR37 186 aa12.38□□□□□ -0.43
SPIN3-236ENST00000640131 FAM172BPA6NC97 362 aa12.38□□□□□ -0.43
SPIN3-236ENST00000640131 GSRP00390 522 aa12.38□□□□□ -0.43
SPIN3-236ENST00000640131 MLLT6P55198 1093 aaPredicted RBP12.38□□□□□ -0.43
SPIN3-236ENST00000640131 MPP1Q00013 466 aa12.38□□□□□ -0.43
SPIN3-236ENST00000640131 GALNT2Q10471 571 aa12.38□□□□□ -0.43
SPIN3-236ENST00000640131 SREBF2Q12772 1141 aa12.38□□□□□ -0.43
SPIN3-236ENST00000640131 PCLAFQ15004 111 aa12.38□□□□□ -0.43
SPIN3-236ENST00000640131 ATAD3BQ5T9A4 648 aa12.38□□□□□ -0.43
SPIN3-236ENST00000640131 ZCCHC8Q6NZY4 707 aaKnown RBP12.38□□□□□ -0.43
SPIN3-236ENST00000640131 ZSCAN18Q8TBC5 510 aaPredicted RBP12.38□□□□□ -0.43
SPIN3-236ENST00000640131 GRIN3AQ8TCU5 1115 aa12.38□□□□□ -0.43
SPIN3-236ENST00000640131 LINC01599Q8WXQ3 324 aa12.38□□□□□ -0.43
SPIN3-236ENST00000640131 JADE3Q92613 823 aa12.38□□□□□ -0.43
SPIN3-236ENST00000640131 CCDC124Q96CT7 223 aaKnown RBP12.38□□□□□ -0.43
SPIN3-236ENST00000640131 ASIC4Q96FT7 647 aa12.38□□□□□ -0.43
SPIN3-236ENST00000640131 CDK5RAP1Q96SZ6 601 aaKnown RBP12.38□□□□□ -0.43
SPIN3-236ENST00000640131 SLC29A1Q99808 456 aa12.38□□□□□ -0.43
SPIN3-236ENST00000640131 IER2Q9BTL4 223 aa12.38□□□□□ -0.43
SPIN3-236ENST00000640131 CLPBQ9H078 707 aa12.38□□□□□ -0.43
SPIN3-236ENST00000640131 SP140LQ9H930 580 aa12.38□□□□□ -0.43
SPIN3-236ENST00000640131 LRRC40Q9H9A6 602 aa12.38□□□□□ -0.43
SPIN3-236ENST00000640131 CSNK1G1Q9HCP0 422 aa12.38□□□□□ -0.43
SPIN3-236ENST00000640131 TAGLN3Q9UI15 199 aa12.38□□□□□ -0.43
SPIN3-236ENST00000640131 POLHQ9Y253 713 aa12.38□□□□□ -0.43
SPIN3-236ENST00000640131 NYNRINQ9P2P1 1898 aaKnown RBP12.38□□□□□ -0.43
SPIN3-236ENST00000640131 ZCWPW2A0A1B0GU75 182 aa12.38□□□□□ -0.43
SPIN3-236ENST00000640131 IRAK2O43187 625 aa12.38□□□□□ -0.43
SPIN3-236ENST00000640131 CKBP12277 381 aa12.38□□□□□ -0.43
SPIN3-236ENST00000640131 SERPINB9P50453 376 aa12.38□□□□□ -0.43
SPIN3-236ENST00000640131 SCAPQ12770 1279 aa12.38□□□□□ -0.43
SPIN3-236ENST00000640131 DSC3Q14574 896 aa12.38□□□□□ -0.43
SPIN3-236ENST00000640131 PSMD5Q16401 504 aa12.38□□□□□ -0.43
SPIN3-236ENST00000640131 ATG16L1Q676U5 607 aa12.38□□□□□ -0.43
SPIN3-236ENST00000640131 IL31Q6EBC2 164 aa12.38□□□□□ -0.43
SPIN3-236ENST00000640131 GLB1LQ6UWU2 654 aa12.38□□□□□ -0.43
SPIN3-236ENST00000640131 MRPL10Q7Z7H8 261 aaKnown RBP12.38□□□□□ -0.43
SPIN3-236ENST00000640131 PSD4Q8NDX1 1056 aa12.38□□□□□ -0.43
SPIN3-236ENST00000640131 PABPC5Q96DU9 382 aaKnown RBP12.38□□□□□ -0.43
SPIN3-236ENST00000640131 SCPEP1Q9HB40 452 aa12.38□□□□□ -0.43
SPIN3-236ENST00000640131 SIRPGQ9P1W8 387 aa12.38□□□□□ -0.43
SPIN3-236ENST00000640131 NOSIPQ9Y314 301 aaKnown RBP12.38□□□□□ -0.43
SPIN3-236ENST00000640131 NLRC5Q86WI3 1866 aa12.37□□□□□ -0.43
SPIN3-236ENST00000640131 PTPRDP23468 1912 aa12.37□□□□□ -0.43
SPIN3-236ENST00000640131 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.37□□□□□ -0.43
SPIN3-236ENST00000640131 PLIN3O60664 434 aa12.37□□□□□ -0.43
SPIN3-236ENST00000640131 KPNA6O60684 536 aa12.37□□□□□ -0.43
SPIN3-236ENST00000640131 CNTN5O94779 1100 aa12.37□□□□□ -0.43
SPIN3-236ENST00000640131 ALDH1A2O94788 518 aa12.37□□□□□ -0.43
SPIN3-236ENST00000640131 VAPBO95292 243 aa12.37□□□□□ -0.43
SPIN3-236ENST00000640131 PRKCGP05129 697 aa12.37□□□□□ -0.43
SPIN3-236ENST00000640131 FGF3P11487 239 aaPredicted RBP12.37□□□□□ -0.43
SPIN3-236ENST00000640131 MLNP12872 115 aa12.37□□□□□ -0.43
SPIN3-236ENST00000640131 GP5P40197 560 aa12.37□□□□□ -0.43
SPIN3-236ENST00000640131 SLC1A6P48664 564 aa12.37□□□□□ -0.43
SPIN3-236ENST00000640131 ACLYP53396 1101 aa12.37□□□□□ -0.43
SPIN3-236ENST00000640131 COX10Q12887 443 aa12.37□□□□□ -0.43
SPIN3-236ENST00000640131 FGD3Q5JSP0 725 aa12.37□□□□□ -0.43
SPIN3-236ENST00000640131 FAM122CQ6P4D5 195 aa12.37□□□□□ -0.43
SPIN3-236ENST00000640131 GALNT18Q6P9A2 607 aa12.37□□□□□ -0.43
SPIN3-236ENST00000640131 EFCAB3Q8N7B9 438 aa12.37□□□□□ -0.43
SPIN3-236ENST00000640131 CD99L2Q8TCZ2 262 aa12.37□□□□□ -0.43
SPIN3-236ENST00000640131 HDAC11Q96DB2 347 aa12.37□□□□□ -0.43
SPIN3-236ENST00000640131 METTL2AQ96IZ6 378 aaKnown RBP12.37□□□□□ -0.43
SPIN3-236ENST00000640131 TEKT5Q96M29 485 aa12.37□□□□□ -0.43
SPIN3-236ENST00000640131 SLC9A7Q96T83 725 aa12.37□□□□□ -0.43
SPIN3-236ENST00000640131 SEPT5Q99719 369 aaPredicted RBP12.37□□□□□ -0.43
SPIN3-236ENST00000640131 ZNF717Q9BY31 904 aaPredicted RBP12.37□□□□□ -0.43
SPIN3-236ENST00000640131 RIC8BQ9NVN3 520 aa12.37□□□□□ -0.43
SPIN3-236ENST00000640131 A0A096LPK6 155 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms