RNA–Protein interactions for RNA: ENST00000636780.1

CLN5-216, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-216ENST00000636780 SUPT3HO75486 399 aa18.84■□□□□ 0.61
CLN5-216ENST00000636780 SRP72O76094 671 aaKnown RBP18.84■□□□□ 0.61
CLN5-216ENST00000636780 WISP3O95389 354 aaPredicted RBP18.84■□□□□ 0.61
CLN5-216ENST00000636780 CD160O95971 181 aa18.84■□□□□ 0.61
CLN5-216ENST00000636780 RHOCP08134 193 aa18.84■□□□□ 0.61
CLN5-216ENST00000636780 GJA1P17302 382 aa18.84■□□□□ 0.61
CLN5-216ENST00000636780 FDXRP22570 491 aa18.84■□□□□ 0.61
CLN5-216ENST00000636780 SATB1Q01826 763 aa18.84■□□□□ 0.61
CLN5-216ENST00000636780 TWF1Q12792 350 aa18.84■□□□□ 0.61
CLN5-216ENST00000636780 OR52E8Q6IFG1 317 aa18.84■□□□□ 0.61
CLN5-216ENST00000636780 PDSS2Q86YH6 399 aa18.84■□□□□ 0.61
CLN5-216ENST00000636780 NPAS4Q8IUM7 802 aa18.84■□□□□ 0.61
CLN5-216ENST00000636780 EFCAB1Q9HAE3 211 aa18.84■□□□□ 0.61
CLN5-216ENST00000636780 PCDHGA7Q9Y5G6 932 aa18.84■□□□□ 0.61
CLN5-216ENST00000636780 PIP5K1BO14986 540 aa18.83■□□□□ 0.61
CLN5-216ENST00000636780 BNIP3LO60238 219 aa18.83■□□□□ 0.61
CLN5-216ENST00000636780 LYNP07948 512 aa18.83■□□□□ 0.61
CLN5-216ENST00000636780 RBP1P09455 135 aa18.83■□□□□ 0.61
CLN5-216ENST00000636780 DNAJB13P59910 316 aa18.83■□□□□ 0.61
CLN5-216ENST00000636780 ARF5P84085 180 aa18.83■□□□□ 0.61
CLN5-216ENST00000636780 HABP4Q5JVS0 413 aaKnown RBP18.83■□□□□ 0.61
CLN5-216ENST00000636780 EID2BQ96D98 161 aa18.83■□□□□ 0.61
CLN5-216ENST00000636780 DEFB118Q96PH6 123 aa18.83■□□□□ 0.61
CLN5-216ENST00000636780 PKP2Q99959 881 aa18.83■□□□□ 0.61
CLN5-216ENST00000636780 SCUBE2Q9NQ36 999 aa18.83■□□□□ 0.61
CLN5-216ENST00000636780 RAI2Q9Y5P3 530 aa18.83■□□□□ 0.61
CLN5-216ENST00000636780 EYSQ5T1H1 3165 aa18.83■□□□□ 0.6
CLN5-216ENST00000636780 PAPSS2O95340 614 aaPredicted RBP18.83■□□□□ 0.6
CLN5-216ENST00000636780 NDST3O95803 873 aa18.83■□□□□ 0.6
CLN5-216ENST00000636780 STC1P52823 247 aa18.83■□□□□ 0.6
CLN5-216ENST00000636780 TRAF2Q12933 501 aa18.83■□□□□ 0.6
CLN5-216ENST00000636780 PTK2BQ14289 1009 aa18.83■□□□□ 0.6
CLN5-216ENST00000636780 CAPRIN1Q14444 709 aaKnown RBP18.83■□□□□ 0.6
CLN5-216ENST00000636780 TAF12Q16514 161 aa18.83■□□□□ 0.6
CLN5-216ENST00000636780 VPS26BQ4G0F5 336 aa18.83■□□□□ 0.6
CLN5-216ENST00000636780 ZRANB3Q5FWF4 1079 aa18.83■□□□□ 0.6
CLN5-216ENST00000636780 TXNDC8Q6A555 127 aa18.83■□□□□ 0.6
CLN5-216ENST00000636780 IRGCQ6NXR0 463 aa18.83■□□□□ 0.6
CLN5-216ENST00000636780 FUNDC1Q8IVP5 155 aa18.83■□□□□ 0.6
CLN5-216ENST00000636780 FEM1CQ96JP0 617 aa18.83■□□□□ 0.6
CLN5-216ENST00000636780 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.83■□□□□ 0.6
CLN5-216ENST00000636780 CLEC4EQ9ULY5 219 aa18.83■□□□□ 0.6
CLN5-216ENST00000636780 PRORSD1PA6NEY8 169 aa18.82■□□□□ 0.6
CLN5-216ENST00000636780 ALDH1A1P00352 501 aa18.82■□□□□ 0.6
CLN5-216ENST00000636780 C1RP00736 705 aa18.82■□□□□ 0.6
CLN5-216ENST00000636780 EEF1DP29692 281 aaKnown RBP18.82■□□□□ 0.6
CLN5-216ENST00000636780 PRDX6P30041 224 aa18.82■□□□□ 0.6
CLN5-216ENST00000636780 CCNHP51946 323 aaPredicted RBP18.82■□□□□ 0.6
CLN5-216ENST00000636780 YBEYP58557 167 aaPredicted RBP18.82■□□□□ 0.6
CLN5-216ENST00000636780 PSME3P61289 254 aa18.82■□□□□ 0.6
CLN5-216ENST00000636780 AAK1Q2M2I8 961 aa18.82■□□□□ 0.6
CLN5-216ENST00000636780 KIF19Q2TAC6 998 aa18.82■□□□□ 0.6
CLN5-216ENST00000636780 UGT3A2Q3SY77 523 aa18.82■□□□□ 0.6
CLN5-216ENST00000636780 HECTD3Q5T447 861 aa18.82■□□□□ 0.6
CLN5-216ENST00000636780 MRNIPQ6NTE8 343 aa18.82■□□□□ 0.6
CLN5-216ENST00000636780 ANKS3Q6ZW76 656 aa18.82■□□□□ 0.6
CLN5-216ENST00000636780 RETREG3Q86VR2 466 aa18.82■□□□□ 0.6
CLN5-216ENST00000636780 TSPAN17Q96FV3 270 aa18.82■□□□□ 0.6
CLN5-216ENST00000636780 KLHL4Q9C0H6 718 aa18.82■□□□□ 0.6
CLN5-216ENST00000636780 PCDHB9Q9Y5E1 797 aa18.82■□□□□ 0.6
CLN5-216ENST00000636780 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.82■□□□□ 0.6
CLN5-216ENST00000636780 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.82■□□□□ 0.6
CLN5-216ENST00000636780 TRPC5OSA6NMA1 111 aa18.82■□□□□ 0.6
CLN5-216ENST00000636780 FGF1P05230 155 aa18.82■□□□□ 0.6
CLN5-216ENST00000636780 ALDH1A3P47895 512 aa18.82■□□□□ 0.6
CLN5-216ENST00000636780 SLC11A2P49281 568 aa18.82■□□□□ 0.6
CLN5-216ENST00000636780 DIO3P55073 304 aa18.82■□□□□ 0.6
CLN5-216ENST00000636780 NOGQ13253 232 aa18.82■□□□□ 0.6
CLN5-216ENST00000636780 ZNF177Q13360 481 aaPredicted RBP18.82■□□□□ 0.6
CLN5-216ENST00000636780 REP15Q6BDI9 236 aa18.82■□□□□ 0.6
CLN5-216ENST00000636780 C16orf89Q6UX73 402 aa18.82■□□□□ 0.6
CLN5-216ENST00000636780 CRIPAKQ8N1N5 446 aa18.82■□□□□ 0.6
CLN5-216ENST00000636780 EEF1AKMT1Q8WVE0 214 aa18.82■□□□□ 0.6
CLN5-216ENST00000636780 SPATA17Q96L03 361 aa18.82■□□□□ 0.6
CLN5-216ENST00000636780 MGME1Q9BQP7 344 aa18.82■□□□□ 0.6
CLN5-216ENST00000636780 AARSD1Q9BTE6 412 aaKnown RBP18.82■□□□□ 0.6
CLN5-216ENST00000636780 CCDC28BQ9BUN5 200 aa18.82■□□□□ 0.6
CLN5-216ENST00000636780 CLASP2O75122 1294 aaKnown RBP18.81■□□□□ 0.6
CLN5-216ENST00000636780 HLA-DPA1P20036 260 aa18.81■□□□□ 0.6
CLN5-216ENST00000636780 MC4RP32245 332 aa18.81■□□□□ 0.6
CLN5-216ENST00000636780 RING1Q06587 406 aa18.81■□□□□ 0.6
CLN5-216ENST00000636780 SLC14A2Q15849 920 aa18.81■□□□□ 0.6
CLN5-216ENST00000636780 IL23RQ5VWK5 629 aa18.81■□□□□ 0.6
CLN5-216ENST00000636780 FAM45BPQ6NSW5 357 aa18.81■□□□□ 0.6
CLN5-216ENST00000636780 TAS2R42Q7RTR8 314 aa18.81■□□□□ 0.6
CLN5-216ENST00000636780 ARL14EPQ8N8R7 260 aaPredicted RBP18.81■□□□□ 0.6
CLN5-216ENST00000636780 FAM45AQ8TCE6 357 aa18.81■□□□□ 0.6
CLN5-216ENST00000636780 MYLIPQ8WY64 445 aa18.81■□□□□ 0.6
CLN5-216ENST00000636780 SEPT8Q92599 483 aa18.81■□□□□ 0.6
CLN5-216ENST00000636780 C19orf60Q96EN9 201 aa18.81■□□□□ 0.6
CLN5-216ENST00000636780 PSKH2Q96QS6 385 aa18.81■□□□□ 0.6
CLN5-216ENST00000636780 MEAF6Q9HAF1 191 aa18.81■□□□□ 0.6
CLN5-216ENST00000636780 CACNA2D2Q9NY47 1150 aa18.81■□□□□ 0.6
CLN5-216ENST00000636780 REV3LO60673 3130 aa18.81■□□□□ 0.6
CLN5-216ENST00000636780 PLXNA3P51805 1871 aa18.81■□□□□ 0.6
CLN5-216ENST00000636780 FNDC1Q4ZHG4 1894 aaPredicted RBP18.81■□□□□ 0.6
CLN5-216ENST00000636780 BTN3A1O00481 513 aa18.81■□□□□ 0.6
CLN5-216ENST00000636780 NR5A2O00482 541 aa18.81■□□□□ 0.6
CLN5-216ENST00000636780 NDUFS3O75489 264 aa18.81■□□□□ 0.6
CLN5-216ENST00000636780 RNASEH2AO75792 299 aaKnown RBP18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms