RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 DEFB107AQ8IZN7 70 aa19.66■□□□□ 0.74
PCDHB11-202ENST00000624887 EFHBQ8N7U6 833 aa19.66■□□□□ 0.74
PCDHB11-202ENST00000624887 MRPS31Q92665 395 aaKnown RBP19.66■□□□□ 0.74
PCDHB11-202ENST00000624887 CATSPER2Q96P56 530 aa19.66■□□□□ 0.74
PCDHB11-202ENST00000624887 ERVK-6Q9BXR3 956 aa19.66■□□□□ 0.74
PCDHB11-202ENST00000624887 FKBPLQ9UIM3 349 aa19.66■□□□□ 0.74
PCDHB11-202ENST00000624887 LSM7Q9UK45 103 aaKnown RBP19.66■□□□□ 0.74
PCDHB11-202ENST00000624887 FCF1Q9Y324 198 aaKnown RBP19.66■□□□□ 0.74
PCDHB11-202ENST00000624887 LRRC42Q9Y546 428 aa19.66■□□□□ 0.74
PCDHB11-202ENST00000624887 H3BMM5 538 aa19.66■□□□□ 0.74
PCDHB11-202ENST00000624887 H7C0S8 307 aa19.66■□□□□ 0.74
PCDHB11-202ENST00000624887 STX7O15400 261 aaKnown RBP19.66■□□□□ 0.74
PCDHB11-202ENST00000624887 SRP72O76094 671 aaKnown RBP19.66■□□□□ 0.74
PCDHB11-202ENST00000624887 CTSAP10619 480 aa19.66■□□□□ 0.74
PCDHB11-202ENST00000624887 MC4RP32245 332 aa19.66■□□□□ 0.74
PCDHB11-202ENST00000624887 CYP4F8P98187 520 aa19.66■□□□□ 0.74
PCDHB11-202ENST00000624887 HERC3Q15034 1050 aa19.66■□□□□ 0.74
PCDHB11-202ENST00000624887 OR4D1Q15615 310 aa19.66■□□□□ 0.74
PCDHB11-202ENST00000624887 MYLK4Q86YV6 388 aaPredicted RBP19.66■□□□□ 0.74
PCDHB11-202ENST00000624887 MFN1Q8IWA4 741 aa19.66■□□□□ 0.74
PCDHB11-202ENST00000624887 RYBPQ8N488 228 aaPredicted RBP19.66■□□□□ 0.74
PCDHB11-202ENST00000624887 MEAF6Q9HAF1 191 aa19.66■□□□□ 0.74
PCDHB11-202ENST00000624887 ZBTB26Q9HCK0 441 aa19.66■□□□□ 0.74
PCDHB11-202ENST00000624887 CDH22Q9UJ99 828 aa19.66■□□□□ 0.74
PCDHB11-202ENST00000624887 G3BP2Q9UN86 482 aaKnown RBP19.66■□□□□ 0.74
PCDHB11-202ENST00000624887 FGF18O76093 207 aa19.65■□□□□ 0.74
PCDHB11-202ENST00000624887 SUPT7LO94864 414 aa19.65■□□□□ 0.74
PCDHB11-202ENST00000624887 MT-CO1P00395 513 aa19.65■□□□□ 0.74
PCDHB11-202ENST00000624887 RPSAP08865 295 aaKnown RBP19.65■□□□□ 0.74
PCDHB11-202ENST00000624887 CD1EP15812 388 aa19.65■□□□□ 0.74
PCDHB11-202ENST00000624887 TTPAP49638 278 aa19.65■□□□□ 0.74
PCDHB11-202ENST00000624887 CDKN1CP49918 316 aaPredicted RBP19.65■□□□□ 0.74
PCDHB11-202ENST00000624887 SLC7A9P82251 487 aa19.65■□□□□ 0.74
PCDHB11-202ENST00000624887 UNC50Q53HI1 259 aa19.65■□□□□ 0.74
PCDHB11-202ENST00000624887 HTR3DQ70Z44 454 aa19.65■□□□□ 0.74
PCDHB11-202ENST00000624887 SNX32Q86XE0 403 aa19.65■□□□□ 0.74
PCDHB11-202ENST00000624887 TMC8Q8IU68 726 aa19.65■□□□□ 0.74
PCDHB11-202ENST00000624887 PIANPQ8IYJ0 282 aa19.65■□□□□ 0.74
PCDHB11-202ENST00000624887 FAM136AQ96C01 138 aa19.65■□□□□ 0.74
PCDHB11-202ENST00000624887 BIRC8Q96P09 236 aa19.65■□□□□ 0.74
PCDHB11-202ENST00000624887 ATOH8Q96SQ7 321 aa19.65■□□□□ 0.74
PCDHB11-202ENST00000624887 LRRC3Q9BY71 257 aa19.65■□□□□ 0.74
PCDHB11-202ENST00000624887 DERL2Q9GZP9 239 aa19.65■□□□□ 0.74
PCDHB11-202ENST00000624887 ZNF510Q9Y2H8 683 aa19.65■□□□□ 0.74
PCDHB11-202ENST00000624887 LCHNA4D1U4 455 aa19.64■□□□□ 0.74
PCDHB11-202ENST00000624887 UBFD1O14562 309 aaKnown RBP19.64■□□□□ 0.74
PCDHB11-202ENST00000624887 PFDN6O15212 129 aa19.64■□□□□ 0.74
PCDHB11-202ENST00000624887 ACRP10323 421 aa19.64■□□□□ 0.74
PCDHB11-202ENST00000624887 MTHFD2P13995 350 aa19.64■□□□□ 0.74
PCDHB11-202ENST00000624887 INHBCP55103 352 aa19.64■□□□□ 0.74
PCDHB11-202ENST00000624887 AP1S1P61966 158 aa19.64■□□□□ 0.74
PCDHB11-202ENST00000624887 CYLC2Q14093 348 aaPredicted RBP19.64■□□□□ 0.74
PCDHB11-202ENST00000624887 ZRSR2Q15696 482 aaKnown RBP19.64■□□□□ 0.74
PCDHB11-202ENST00000624887 PPM1LQ5SGD2 360 aa19.64■□□□□ 0.74
PCDHB11-202ENST00000624887 ATXN7L2Q5T6C5 722 aaPredicted RBP19.64■□□□□ 0.74
PCDHB11-202ENST00000624887 PSAPL1Q6NUJ1 521 aa19.64■□□□□ 0.74
PCDHB11-202ENST00000624887 PAQR3Q6TCH7 311 aa19.64■□□□□ 0.74
PCDHB11-202ENST00000624887 CHSY3Q70JA7 882 aa19.64■□□□□ 0.74
PCDHB11-202ENST00000624887 PELI3Q8N2H9 469 aa19.64■□□□□ 0.74
PCDHB11-202ENST00000624887 CPXM2Q8N436 756 aa19.64■□□□□ 0.74
PCDHB11-202ENST00000624887 MAB21L3Q8N8X9 362 aa19.64■□□□□ 0.74
PCDHB11-202ENST00000624887 DTX3LQ8TDB6 740 aa19.64■□□□□ 0.74
PCDHB11-202ENST00000624887 DDI1Q8WTU0 396 aa19.64■□□□□ 0.74
PCDHB11-202ENST00000624887 USP13Q92995 863 aaPredicted RBP19.64■□□□□ 0.74
PCDHB11-202ENST00000624887 BHMTQ93088 406 aa19.64■□□□□ 0.74
PCDHB11-202ENST00000624887 KIAA1191Q96A73 305 aa19.64■□□□□ 0.74
PCDHB11-202ENST00000624887 RSRC1Q96IZ7 334 aaKnown RBP19.64■□□□□ 0.74
PCDHB11-202ENST00000624887 ZNF570Q96NI8 536 aa19.64■□□□□ 0.74
PCDHB11-202ENST00000624887 C2orf49Q9BVC5 232 aaPredicted RBP19.64■□□□□ 0.74
PCDHB11-202ENST00000624887 FAM50BQ9Y247 325 aa19.64■□□□□ 0.74
PCDHB11-202ENST00000624887 FIS1Q9Y3D6 152 aa19.64■□□□□ 0.74
PCDHB11-202ENST00000624887 TRAF6Q9Y4K3 522 aa19.64■□□□□ 0.74
PCDHB11-202ENST00000624887 PCDHB9Q9Y5E1 797 aa19.64■□□□□ 0.74
PCDHB11-202ENST00000624887 COPG1Q9Y678 874 aaKnown RBP19.64■□□□□ 0.74
PCDHB11-202ENST00000624887 OAS3Q9Y6K5 1087 aaKnown RBP19.64■□□□□ 0.74
PCDHB11-202ENST00000624887 SKAP2O75563 359 aaPredicted RBP19.64■□□□□ 0.73
PCDHB11-202ENST00000624887 BAIAP3O94812 1187 aa19.64■□□□□ 0.73
PCDHB11-202ENST00000624887 CKMP06732 381 aa19.64■□□□□ 0.73
PCDHB11-202ENST00000624887 CD9P21926 228 aa19.64■□□□□ 0.73
PCDHB11-202ENST00000624887 CA8P35219 290 aa19.64■□□□□ 0.73
PCDHB11-202ENST00000624887 SESN3P58005 492 aa19.64■□□□□ 0.73
PCDHB11-202ENST00000624887 TBL3Q12788 808 aaKnown RBP19.64■□□□□ 0.73
PCDHB11-202ENST00000624887 PTPRRQ15256 657 aa19.64■□□□□ 0.73
PCDHB11-202ENST00000624887 PTPRNQ16849 979 aa19.64■□□□□ 0.73
PCDHB11-202ENST00000624887 RETSATQ6NUM9 610 aa19.64■□□□□ 0.73
PCDHB11-202ENST00000624887 HS6ST3Q8IZP7 471 aa19.64■□□□□ 0.73
PCDHB11-202ENST00000624887 APCDD1Q8J025 514 aa19.64■□□□□ 0.73
PCDHB11-202ENST00000624887 PTGR2Q8N8N7 351 aaPredicted RBP19.64■□□□□ 0.73
PCDHB11-202ENST00000624887 SHKBP1Q8TBC3 707 aa19.64■□□□□ 0.73
PCDHB11-202ENST00000624887 BPIFA1Q9NP55 256 aa19.64■□□□□ 0.73
PCDHB11-202ENST00000624887 MRGBPQ9NV56 204 aa19.64■□□□□ 0.73
PCDHB11-202ENST00000624887 PTPRSQ13332 1948 aa19.63■□□□□ 0.73
PCDHB11-202ENST00000624887 UBXN8O00124 270 aa19.63■□□□□ 0.73
PCDHB11-202ENST00000624887 KERAO60938 352 aa19.63■□□□□ 0.73
PCDHB11-202ENST00000624887 LRG1P02750 347 aa19.63■□□□□ 0.73
PCDHB11-202ENST00000624887 VHLP40337 213 aa19.63■□□□□ 0.73
PCDHB11-202ENST00000624887 CLCN4P51793 760 aa19.63■□□□□ 0.73
PCDHB11-202ENST00000624887 EPHB1P54762 984 aa19.63■□□□□ 0.73
PCDHB11-202ENST00000624887 ATP6V0D1P61421 351 aa19.63■□□□□ 0.73
PCDHB11-202ENST00000624887 RAD51Q06609 339 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms