RNA–Protein interactions for RNA: ENST00000616051.1

RCC1L-204, Transcript of RCC1 like, human

TSL 2

Gene RCC1L, Length 1,610 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RCC1L-204	ENST00000616051	SLC2A6	Q9UGQ3	507 aa		27.57	■■■□□ 2
RCC1L-204	ENST00000616051	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	27.57	■■■□□ 2
RCC1L-204	ENST00000616051	MAD1L1	Q9Y6D9	718 aa		27.57	■■■□□ 2
RCC1L-204	ENST00000616051		V9GYY5	206 aa	Predicted RBP	27.57	■■■□□ 2
RCC1L-204	ENST00000616051	ZNF106	Q9H2Y7	1883 aa	Known RBP	27.57	■■■□□ 2
RCC1L-204	ENST00000616051	PRAMEF26	H0Y7S4	382 aa		27.56	■■■□□ 2
RCC1L-204	ENST00000616051	ITPKA	P23677	461 aa		27.56	■■■□□ 2
RCC1L-204	ENST00000616051	NMBR	P28336	390 aa		27.56	■■■□□ 2
RCC1L-204	ENST00000616051	AKT2	P31751	481 aa		27.56	■■■□□ 2
RCC1L-204	ENST00000616051	DCDC1	P59894	354 aa		27.56	■■■□□ 2
RCC1L-204	ENST00000616051	PDIA2	Q13087	525 aa	Known RBP	27.56	■■■□□ 2
RCC1L-204	ENST00000616051	IRF4	Q15306	451 aa		27.56	■■■□□ 2
RCC1L-204	ENST00000616051	CENPU	Q71F23	418 aa		27.56	■■■□□ 2
RCC1L-204	ENST00000616051	NLRP8	Q86W28	1048 aa		27.56	■■■□□ 2
RCC1L-204	ENST00000616051	IGDCC3	Q8IVU1	814 aa		27.56	■■■□□ 2
RCC1L-204	ENST00000616051	RGL4	Q8IZJ4	473 aa		27.56	■■■□□ 2
RCC1L-204	ENST00000616051	PELI3	Q8N2H9	469 aa		27.56	■■■□□ 2
RCC1L-204	ENST00000616051	OR13J1	Q8NGT2	312 aa		27.56	■■■□□ 2
RCC1L-204	ENST00000616051	PEX13	Q92968	403 aa		27.56	■■■□□ 2
RCC1L-204	ENST00000616051	SERAC1	Q96JX3	654 aa		27.56	■■■□□ 2
RCC1L-204	ENST00000616051	PLEKHG4B	Q96PX9	1271 aa		27.56	■■■□□ 2
RCC1L-204	ENST00000616051	EBNA1BP2	Q99848	306 aa	Known RBP	27.56	■■■□□ 2
RCC1L-204	ENST00000616051	RIOK2	Q9BVS4	552 aa	Known RBP	27.56	■■■□□ 2
RCC1L-204	ENST00000616051	FOXP3	Q9BZS1	431 aa		27.56	■■■□□ 2
RCC1L-204	ENST00000616051	IL26	Q9NPH9	171 aa		27.56	■■■□□ 2
RCC1L-204	ENST00000616051	HADHA	P40939	763 aa		27.56	■■■□□ 2
RCC1L-204	ENST00000616051	PTPN5	P54829	565 aa		27.56	■■■□□ 2
RCC1L-204	ENST00000616051	HP1BP3	Q5SSJ5	553 aa	Predicted RBP	27.56	■■■□□ 2
RCC1L-204	ENST00000616051	HENMT1	Q5T8I9	393 aa	Known RBP	27.56	■■■□□ 2
RCC1L-204	ENST00000616051	ZDHHC20	Q5W0Z9	365 aa		27.56	■■■□□ 2
RCC1L-204	ENST00000616051	ALS2CL	Q60I27	953 aa		27.56	■■■□□ 2
RCC1L-204	ENST00000616051	ESRP1	Q6NXG1	681 aa	Known RBP	27.56	■■■□□ 2
RCC1L-204	ENST00000616051	CES3	Q6UWW8	571 aa		27.56	■■■□□ 2
RCC1L-204	ENST00000616051	TMEM145	Q8NBT3	493 aa		27.56	■■■□□ 2
RCC1L-204	ENST00000616051	PLA2G15	Q8NCC3	412 aa		27.56	■■■□□ 2
RCC1L-204	ENST00000616051	C1orf216	Q8TAB5	229 aa		27.56	■■■□□ 2
RCC1L-204	ENST00000616051	LRRC39	Q96DD0	335 aa		27.56	■■■□□ 2
RCC1L-204	ENST00000616051	STAMBPL1	Q96FJ0	436 aa		27.56	■■■□□ 2
RCC1L-204	ENST00000616051	CDKN2AIPNL	Q96HQ2	116 aa		27.56	■■■□□ 2
RCC1L-204	ENST00000616051	WDR83	Q9BRX9	315 aa	Known RBP	27.56	■■■□□ 2
RCC1L-204	ENST00000616051	TRIM56	Q9BRZ2	755 aa	Known RBP	27.56	■■■□□ 2
RCC1L-204	ENST00000616051	IRF2BPL	Q9H1B7	796 aa		27.56	■■■□□ 2
RCC1L-204	ENST00000616051	TREX1	Q9NSU2	369 aa		27.56	■■■□□ 2
RCC1L-204	ENST00000616051	FKBPL	Q9UIM3	349 aa		27.56	■■■□□ 2
RCC1L-204	ENST00000616051	CA5B	Q9Y2D0	317 aa		27.56	■■■□□ 2
RCC1L-204	ENST00000616051	TEX264	Q9Y6I9	313 aa		27.56	■■■□□ 2
RCC1L-204	ENST00000616051	MUC6	Q6W4X9	2439 aa		27.55	■■■□□ 2
RCC1L-204	ENST00000616051	FAM237B	A0A1B0GVD1	139 aa		27.55	■■■□□ 2
RCC1L-204	ENST00000616051	CCL22	O00626	93 aa		27.55	■■■□□ 2
RCC1L-204	ENST00000616051	IGFALS	P35858	605 aa		27.55	■■■□□ 2
RCC1L-204	ENST00000616051	SPAM1	P38567	509 aa		27.55	■■■□□ 2
RCC1L-204	ENST00000616051	ELK3	P41970	407 aa		27.55	■■■□□ 2
RCC1L-204	ENST00000616051	ARSD	P51689	593 aa		27.55	■■■□□ 2
RCC1L-204	ENST00000616051	ACVR1	Q04771	509 aa		27.55	■■■□□ 2
RCC1L-204	ENST00000616051	LPAL2	Q16609	132 aa		27.55	■■■□□ 2
RCC1L-204	ENST00000616051	ERCC6L	Q2NKX8	1250 aa		27.55	■■■□□ 2
RCC1L-204	ENST00000616051	MFSD3	Q96ES6	412 aa		27.55	■■■□□ 2
RCC1L-204	ENST00000616051	TBATA	Q96M53	351 aa		27.55	■■■□□ 2
RCC1L-204	ENST00000616051	AGAP2	Q99490	1192 aa		27.55	■■■□□ 2
RCC1L-204	ENST00000616051	MIR1-1HG	Q9H1L0	117 aa		27.55	■■■□□ 2
RCC1L-204	ENST00000616051	NFU1	Q9UMS0	254 aa		27.55	■■■□□ 2
RCC1L-204	ENST00000616051	FNDC3A	Q9Y2H6	1198 aa	Known RBP	27.55	■■■□□ 2
RCC1L-204	ENST00000616051	HS3ST3A1	Q9Y663	406 aa		27.55	■■■□□ 2
RCC1L-204	ENST00000616051	VPS13A	Q96RL7	3174 aa		27.54	■■■□□ 2
RCC1L-204	ENST00000616051		K7ESM1	405 aa		27.54	■■■□□ 2
RCC1L-204	ENST00000616051	GAPDHS	O14556	408 aa	Predicted RBP	27.54	■■■□□ 2
RCC1L-204	ENST00000616051	EIF3H	O15372	352 aa	Known RBP eCLIP	27.54	■■■□□ 2
RCC1L-204	ENST00000616051	PCCB	P05166	539 aa		27.54	■■■□□ 2
RCC1L-204	ENST00000616051	CLDN2	P57739	230 aa		27.54	■■■□□ 2
RCC1L-204	ENST00000616051	XIAP	P98170	497 aa		27.54	■■■□□ 2
RCC1L-204	ENST00000616051	FASTKD3	Q14CZ7	662 aa	Known RBP	27.54	■■■□□ 2
RCC1L-204	ENST00000616051	PNCK	Q6P2M8	343 aa		27.54	■■■□□ 2
RCC1L-204	ENST00000616051	TMEM135	Q86UB9	458 aa		27.54	■■■□□ 2
RCC1L-204	ENST00000616051	BMF	Q96LC9	184 aa		27.54	■■■□□ 2
RCC1L-204	ENST00000616051	PHACTR1	Q9C0D0	580 aa		27.54	■■■□□ 2
RCC1L-204	ENST00000616051	MTRF1L	Q9UGC7	380 aa	Known RBP	27.54	■■■□□ 2
RCC1L-204	ENST00000616051	POM121B	A6NF01	834 aa		27.53	■■■□□ 2
RCC1L-204	ENST00000616051		H7C0S8	307 aa		27.53	■■■□□ 2
RCC1L-204	ENST00000616051	ANKRD20A4	Q4UJ75	823 aa		27.53	■■■□□ 2
RCC1L-204	ENST00000616051	KDM7A	Q6ZMT4	941 aa		27.53	■■■□□ 2
RCC1L-204	ENST00000616051	GCNT7	Q6ZNI0	430 aa		27.53	■■■□□ 2
RCC1L-204	ENST00000616051	ATOH1	Q92858	354 aa	Predicted RBP	27.53	■■■□□ 2
RCC1L-204	ENST00000616051	SLC6A18	Q96N87	628 aa		27.53	■■■□□ 2
RCC1L-204	ENST00000616051	SUDS3	Q9H7L9	328 aa	Predicted RBP	27.53	■■■□□ 2
RCC1L-204	ENST00000616051	SAYSD1	Q9NPB0	183 aa		27.53	■■■□□ 2
RCC1L-204	ENST00000616051	CHMP2B	Q9UQN3	213 aa		27.53	■■■□□ 2
RCC1L-204	ENST00000616051	PI4KA	P42356	2102 aa		27.53	■■■□□ 2
RCC1L-204	ENST00000616051	GLYATL1P3	A0A0U1RQE8	302 aa		27.52	■■■□□ 2
RCC1L-204	ENST00000616051	FPGT	O14772	594 aa		27.52	■■■□□ 2
RCC1L-204	ENST00000616051	SOD1	P00441	154 aa		27.52	■■■□□ 2
RCC1L-204	ENST00000616051	PEX6	Q13608	980 aa		27.52	■■■□□ 2
RCC1L-204	ENST00000616051	INPP5A	Q14642	412 aa		27.52	■■■□□ 2
RCC1L-204	ENST00000616051	FAM151B	Q6UXP7	276 aa		27.52	■■■□□ 2
RCC1L-204	ENST00000616051	MICALCL	Q6ZW33	695 aa		27.52	■■■□□ 2
RCC1L-204	ENST00000616051	CCDC25	Q86WR0	208 aa		27.52	■■■□□ 2
RCC1L-204	ENST00000616051	ANKMY2	Q8IV38	441 aa		27.52	■■■□□ 2
RCC1L-204	ENST00000616051	DTX3L	Q8TDB6	740 aa		27.52	■■■□□ 2
RCC1L-204	ENST00000616051	RUBCN	Q92622	972 aa		27.52	■■■□□ 2
RCC1L-204	ENST00000616051	HDAC10	Q969S8	669 aa		27.52	■■■□□ 2
RCC1L-204	ENST00000616051	FCRL3	Q96P31	734 aa	Predicted RBP	27.52	■■■□□ 2

Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms