RNA–Protein interactions for RNA: ENST00000613524.4

SYCP1-209, Transcript of synaptonemal complex protein 1, humanhuman

TSL 1 (best) BASIC

Gene SYCP1, Length 3,034 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-209ENST00000613524 ZNF235Q14590 738 aa5□□□□□ -1.61
SYCP1-209ENST00000613524 HADHQ16836 314 aaKnown RBP5□□□□□ -1.61
SYCP1-209ENST00000613524 FBXO43Q4G163 708 aa5□□□□□ -1.61
SYCP1-209ENST00000613524 SEL1L3Q68CR1 1132 aa5□□□□□ -1.61
SYCP1-209ENST00000613524 ZCCHC8Q6NZY4 707 aaKnown RBP5□□□□□ -1.61
SYCP1-209ENST00000613524 DOK6Q6PKX4 331 aa5□□□□□ -1.61
SYCP1-209ENST00000613524 RFX8Q6ZV50 586 aa5□□□□□ -1.61
SYCP1-209ENST00000613524 MARK2Q7KZI7 788 aaKnown RBP5□□□□□ -1.61
SYCP1-209ENST00000613524 SYT13Q7L8C5 426 aa5□□□□□ -1.61
SYCP1-209ENST00000613524 SH2D3CQ8N5H7 860 aa5□□□□□ -1.61
SYCP1-209ENST00000613524 OTUB2Q96DC9 234 aa5□□□□□ -1.61
SYCP1-209ENST00000613524 TRIM62Q9BVG3 475 aa5□□□□□ -1.61
SYCP1-209ENST00000613524 RABEP2Q9H5N1 569 aa5□□□□□ -1.61
SYCP1-209ENST00000613524 CASS4Q9NQ75 786 aa5□□□□□ -1.61
SYCP1-209ENST00000613524 ZSCAN32Q9NX65 697 aa5□□□□□ -1.61
SYCP1-209ENST00000613524 SHOC2Q9UQ13 582 aa5□□□□□ -1.61
SYCP1-209ENST00000613524 SMG1Q96Q15 3661 aaKnown RBP5□□□□□ -1.61
SYCP1-209ENST00000613524 TRBV23OR9-2A0A075B6M9 112 aa4.99□□□□□ -1.61
SYCP1-209ENST00000613524 A0A1B0GVT2 93 aa4.99□□□□□ -1.61
SYCP1-209ENST00000613524 ZSCAN5CA6NGD5 496 aaPredicted RBP4.99□□□□□ -1.61
SYCP1-209ENST00000613524 B9A039 149 aa4.99□□□□□ -1.61
SYCP1-209ENST00000613524 H7C0C1 242 aa4.99□□□□□ -1.61
SYCP1-209ENST00000613524 JCHAINP01591 159 aa4.99□□□□□ -1.61
SYCP1-209ENST00000613524 POU2F2P09086 479 aa4.99□□□□□ -1.61
SYCP1-209ENST00000613524 SRCP12931 536 aa4.99□□□□□ -1.61
SYCP1-209ENST00000613524 MAPK9P45984 424 aa4.99□□□□□ -1.61
SYCP1-209ENST00000613524 GABRB2P47870 512 aa4.99□□□□□ -1.61
SYCP1-209ENST00000613524 ATP5OP48047 213 aa4.99□□□□□ -1.61
SYCP1-209ENST00000613524 CDH4P55283 916 aa4.99□□□□□ -1.61
SYCP1-209ENST00000613524 ARF5P84085 180 aa4.99□□□□□ -1.61
SYCP1-209ENST00000613524 ADCY2Q08462 1091 aa4.99□□□□□ -1.61
SYCP1-209ENST00000613524 SLC10A7Q0GE19 358 aa4.99□□□□□ -1.61
SYCP1-209ENST00000613524 NOMO1Q15155 1222 aa4.99□□□□□ -1.61
SYCP1-209ENST00000613524 TRADDQ15628 312 aa4.99□□□□□ -1.61
SYCP1-209ENST00000613524 MFSD7Q6UXD7 560 aa4.99□□□□□ -1.61
SYCP1-209ENST00000613524 LPCAT2Q7L5N7 544 aa4.99□□□□□ -1.61
SYCP1-209ENST00000613524 SYT9Q86SS6 491 aa4.99□□□□□ -1.61
SYCP1-209ENST00000613524 ZDHHC17Q8IUH5 632 aa4.99□□□□□ -1.61
SYCP1-209ENST00000613524 ATPAF2Q8N5M1 289 aa4.99□□□□□ -1.61
SYCP1-209ENST00000613524 SLC25A41Q8N5S1 370 aa4.99□□□□□ -1.61
SYCP1-209ENST00000613524 C1orf162Q8NEQ5 155 aaPredicted RBP4.99□□□□□ -1.61
SYCP1-209ENST00000613524 FIBINQ8TAL6 211 aa4.99□□□□□ -1.61
SYCP1-209ENST00000613524 BCAS4Q8TDM0 211 aa4.99□□□□□ -1.61
SYCP1-209ENST00000613524 CINPQ9BW66 212 aaPredicted RBP4.99□□□□□ -1.61
SYCP1-209ENST00000613524 BTBD1Q9H0C5 482 aa4.99□□□□□ -1.61
SYCP1-209ENST00000613524 BRD8Q9H0E9 1235 aa4.99□□□□□ -1.61
SYCP1-209ENST00000613524 IL21RQ9HBE5 538 aa4.99□□□□□ -1.61
SYCP1-209ENST00000613524 PARD6AQ9NPB6 346 aa4.99□□□□□ -1.61
SYCP1-209ENST00000613524 FZD10Q9ULW2 581 aa4.99□□□□□ -1.61
SYCP1-209ENST00000613524 SRPK3Q9UPE1 567 aa4.99□□□□□ -1.61
SYCP1-209ENST00000613524 CORO2BQ9UQ03 480 aa4.99□□□□□ -1.61
SYCP1-209ENST00000613524 SSU72P8A0A1W2PR75 194 aa4.99□□□□□ -1.61
SYCP1-209ENST00000613524 WNT9AO14904 365 aa4.99□□□□□ -1.61
SYCP1-209ENST00000613524 LATO43561 262 aa4.99□□□□□ -1.61
SYCP1-209ENST00000613524 USP12O75317 370 aa4.99□□□□□ -1.61
SYCP1-209ENST00000613524 PMPCBO75439 489 aa4.99□□□□□ -1.61
SYCP1-209ENST00000613524 GHRHP01286 108 aa4.99□□□□□ -1.61
SYCP1-209ENST00000613524 IGLV3-27P01718 113 aa4.99□□□□□ -1.61
SYCP1-209ENST00000613524 KRT14P02533 472 aa4.99□□□□□ -1.61
SYCP1-209ENST00000613524 CLEC2LP0C7M8 214 aa4.99□□□□□ -1.61
SYCP1-209ENST00000613524 CDH5P33151 784 aaPredicted RBP4.99□□□□□ -1.61
SYCP1-209ENST00000613524 RPIAP49247 311 aa4.99□□□□□ -1.61
SYCP1-209ENST00000613524 FNTAP49354 379 aa4.99□□□□□ -1.61
SYCP1-209ENST00000613524 RING1Q06587 406 aa4.99□□□□□ -1.61
SYCP1-209ENST00000613524 C1orf61Q13536 156 aa4.99□□□□□ -1.61
SYCP1-209ENST00000613524 TRIP13Q15645 432 aaPredicted RBP4.99□□□□□ -1.61
SYCP1-209ENST00000613524 CST6Q15828 149 aa4.99□□□□□ -1.61
SYCP1-209ENST00000613524 TMEM95Q3KNT9 176 aa4.99□□□□□ -1.61
SYCP1-209ENST00000613524 INAVAQ3KP66 663 aa4.99□□□□□ -1.61
SYCP1-209ENST00000613524 GLE1Q53GS7 698 aaKnown RBP4.99□□□□□ -1.61
SYCP1-209ENST00000613524 ARMC12Q5T9G4 340 aa4.99□□□□□ -1.61
SYCP1-209ENST00000613524 DCAF12L1Q5VU92 463 aa4.99□□□□□ -1.61
SYCP1-209ENST00000613524 LYSMD4Q5XG99 296 aa4.99□□□□□ -1.61
SYCP1-209ENST00000613524 PLEKHA7Q6IQ23 1121 aa4.99□□□□□ -1.61
SYCP1-209ENST00000613524 CCDC70Q6NSX1 233 aa4.99□□□□□ -1.61
SYCP1-209ENST00000613524 RETSATQ6NUM9 610 aa4.99□□□□□ -1.61
SYCP1-209ENST00000613524 BMP8AQ7Z5Y6 402 aa4.99□□□□□ -1.61
SYCP1-209ENST00000613524 LONP2Q86WA8 852 aa4.99□□□□□ -1.61
SYCP1-209ENST00000613524 SCUBE1Q8IWY4 988 aa4.99□□□□□ -1.61
SYCP1-209ENST00000613524 SYNPOQ8N3V7 929 aa4.99□□□□□ -1.61
SYCP1-209ENST00000613524 MREGQ8N565 214 aa4.99□□□□□ -1.61
SYCP1-209ENST00000613524 RNF10Q8N5U6 811 aaKnown RBP4.99□□□□□ -1.61
SYCP1-209ENST00000613524 OR6P1Q8NGX9 317 aa4.99□□□□□ -1.61
SYCP1-209ENST00000613524 OLIG1Q8TAK6 271 aa4.99□□□□□ -1.61
SYCP1-209ENST00000613524 ATG4AQ8WYN0 398 aa4.99□□□□□ -1.61
SYCP1-209ENST00000613524 PTPRN2Q92932 1015 aa4.99□□□□□ -1.61
SYCP1-209ENST00000613524 CLDN23Q96B33 292 aa4.99□□□□□ -1.61
SYCP1-209ENST00000613524 C1orf159Q96HA4 380 aa4.99□□□□□ -1.61
SYCP1-209ENST00000613524 FAXDC2Q96IV6 333 aa4.99□□□□□ -1.61
SYCP1-209ENST00000613524 SERAC1Q96JX3 654 aa4.99□□□□□ -1.61
SYCP1-209ENST00000613524 CSPG4P5Q96PW8 444 aa4.99□□□□□ -1.61
SYCP1-209ENST00000613524 PRMT1Q99873 361 aaKnown RBP4.99□□□□□ -1.61
SYCP1-209ENST00000613524 ELAC2Q9BQ52 826 aaKnown RBP4.99□□□□□ -1.61
SYCP1-209ENST00000613524 EDEM3Q9BZQ6 932 aa4.99□□□□□ -1.61
SYCP1-209ENST00000613524 NRSN2Q9GZP1 204 aa4.99□□□□□ -1.61
SYCP1-209ENST00000613524 SEMA4GQ9NTN9 838 aa4.99□□□□□ -1.61
SYCP1-209ENST00000613524 COMMD8Q9NX08 183 aa4.99□□□□□ -1.61
SYCP1-209ENST00000613524 UBA2Q9UBT2 640 aaPredicted RBP4.99□□□□□ -1.61
SYCP1-209ENST00000613524 CGGBP1Q9UFW8 167 aaPredicted RBP4.99□□□□□ -1.61
SYCP1-209ENST00000613524 IPO11Q9UI26 975 aaKnown RBP4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms