RNA–Protein interactions for RNA: ENST00000613138.1

CSTF1-208, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 4

Gene CSTF1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-208ENST00000613138 APC2O95996 2303 aa12.62□□□□□ -0.39
CSTF1-208ENST00000613138 BPTFQ12830 3046 aa12.62□□□□□ -0.39
CSTF1-208ENST00000613138 PSMD11O00231 422 aa12.62□□□□□ -0.39
CSTF1-208ENST00000613138 CACNB4O00305 520 aaPredicted RBP12.62□□□□□ -0.39
CSTF1-208ENST00000613138 KCNN4O15554 427 aa12.62□□□□□ -0.39
CSTF1-208ENST00000613138 AGTP01019 485 aa12.62□□□□□ -0.39
CSTF1-208ENST00000613138 ATP1A1P05023 1023 aaKnown RBP12.62□□□□□ -0.39
CSTF1-208ENST00000613138 CEACAM5P06731 702 aa12.62□□□□□ -0.39
CSTF1-208ENST00000613138 AK4P27144 223 aaPredicted RBP12.62□□□□□ -0.39
CSTF1-208ENST00000613138 CA5AP35218 305 aa12.62□□□□□ -0.39
CSTF1-208ENST00000613138 GPR1P46091 355 aa12.62□□□□□ -0.39
CSTF1-208ENST00000613138 GDF10P55107 478 aa12.62□□□□□ -0.39
CSTF1-208ENST00000613138 KLF1Q13351 362 aaPredicted RBP12.62□□□□□ -0.39
CSTF1-208ENST00000613138 SPARCL1Q14515 664 aa12.62□□□□□ -0.39
CSTF1-208ENST00000613138 PTPRCAPQ14761 206 aa12.62□□□□□ -0.39
CSTF1-208ENST00000613138 DARS2Q6PI48 645 aaKnown RBP12.62□□□□□ -0.39
CSTF1-208ENST00000613138 MARK2Q7KZI7 788 aaKnown RBP12.62□□□□□ -0.39
CSTF1-208ENST00000613138 KYQ8NBH2 561 aa12.62□□□□□ -0.39
CSTF1-208ENST00000613138 GPR26Q8NDV2 337 aa12.62□□□□□ -0.39
CSTF1-208ENST00000613138 IPMKQ8NFU5 416 aa12.62□□□□□ -0.39
CSTF1-208ENST00000613138 LYSMD1Q96S90 227 aa12.62□□□□□ -0.39
CSTF1-208ENST00000613138 TEX101Q9BY14 249 aa12.62□□□□□ -0.39
CSTF1-208ENST00000613138 FRMD8Q9BZ67 464 aaPredicted RBP12.62□□□□□ -0.39
CSTF1-208ENST00000613138 USP29Q9HBJ7 922 aa12.62□□□□□ -0.39
CSTF1-208ENST00000613138 BPIFA1Q9NP55 256 aa12.62□□□□□ -0.39
CSTF1-208ENST00000613138 HAUS2Q9NVX0 235 aa12.62□□□□□ -0.39
CSTF1-208ENST00000613138 SPASTQ9UBP0 616 aa12.62□□□□□ -0.39
CSTF1-208ENST00000613138 RSPH14Q9UHP6 348 aa12.62□□□□□ -0.39
CSTF1-208ENST00000613138 RABGEF1Q9UJ41 708 aa12.62□□□□□ -0.39
CSTF1-208ENST00000613138 CNOT6Q9ULM6 557 aaKnown RBP12.62□□□□□ -0.39
CSTF1-208ENST00000613138 ZNF711Q9Y462 761 aa12.62□□□□□ -0.39
CSTF1-208ENST00000613138 PRKAB1Q9Y478 270 aa12.62□□□□□ -0.39
CSTF1-208ENST00000613138 CACNA1BQ00975 2339 aa12.61□□□□□ -0.39
CSTF1-208ENST00000613138 PRSS38A1L453 326 aa12.61□□□□□ -0.39
CSTF1-208ENST00000613138 CPED1A4D0V7 1026 aa12.61□□□□□ -0.39
CSTF1-208ENST00000613138 HACD1B0YJ81 288 aa12.61□□□□□ -0.39
CSTF1-208ENST00000613138 GPR39O43194 453 aa12.61□□□□□ -0.39
CSTF1-208ENST00000613138 NDST3O95803 873 aa12.61□□□□□ -0.39
CSTF1-208ENST00000613138 TNFP01375 233 aa12.61□□□□□ -0.39
CSTF1-208ENST00000613138 CDK4P11802 303 aa12.61□□□□□ -0.39
CSTF1-208ENST00000613138 MYCLP1P12525 358 aaPredicted RBP12.61□□□□□ -0.39
CSTF1-208ENST00000613138 CTSEP14091 401 aa12.61□□□□□ -0.39
CSTF1-208ENST00000613138 CA4P22748 312 aa12.61□□□□□ -0.39
CSTF1-208ENST00000613138 ACP1P24666 158 aa12.61□□□□□ -0.39
CSTF1-208ENST00000613138 HTR1BP28222 390 aa12.61□□□□□ -0.39
CSTF1-208ENST00000613138 GNPDA1P46926 289 aa12.61□□□□□ -0.39
CSTF1-208ENST00000613138 SPINT3P49223 89 aa12.61□□□□□ -0.39
CSTF1-208ENST00000613138 RPL26P61254 145 aaKnown RBP12.61□□□□□ -0.39
CSTF1-208ENST00000613138 XRCC4Q13426 336 aa12.61□□□□□ -0.39
CSTF1-208ENST00000613138 SIRPB2Q5JXA9 342 aa12.61□□□□□ -0.39
CSTF1-208ENST00000613138 ANKRD20A2Q5SQ80 823 aa12.61□□□□□ -0.39
CSTF1-208ENST00000613138 HES3Q5TGS1 186 aa12.61□□□□□ -0.39
CSTF1-208ENST00000613138 ANKRD20A1Q5TYW2 823 aa12.61□□□□□ -0.39
CSTF1-208ENST00000613138 ANKRD20A3Q5VUR7 823 aa12.61□□□□□ -0.39
CSTF1-208ENST00000613138 UNQ6494/PRO21346Q6UXR6 183 aa12.61□□□□□ -0.39
CSTF1-208ENST00000613138 CCNI2Q6ZMN8 369 aaPredicted RBP12.61□□□□□ -0.39
CSTF1-208ENST00000613138 BZW1Q7L1Q6 419 aaKnown RBP12.61□□□□□ -0.39
CSTF1-208ENST00000613138 TMPRSS7Q7RTY8 843 aa12.61□□□□□ -0.39
CSTF1-208ENST00000613138 NRROSQ86YC3 692 aa12.61□□□□□ -0.39
CSTF1-208ENST00000613138 SYCE1Q8N0S2 351 aa12.61□□□□□ -0.39
CSTF1-208ENST00000613138 UBL4BQ8N7F7 174 aa12.61□□□□□ -0.39
CSTF1-208ENST00000613138 FCRL5Q96RD9 977 aa12.61□□□□□ -0.39
CSTF1-208ENST00000613138 FICDQ9BVA6 458 aa12.61□□□□□ -0.39
CSTF1-208ENST00000613138 GBA3Q9H227 469 aa12.61□□□□□ -0.39
CSTF1-208ENST00000613138 KCNF1Q9H3M0 494 aa12.61□□□□□ -0.39
CSTF1-208ENST00000613138 CARS2Q9HA77 564 aaKnown RBP12.61□□□□□ -0.39
CSTF1-208ENST00000613138 GULP1Q9UBP9 304 aa12.61□□□□□ -0.39
CSTF1-208ENST00000613138 FAM153AQ9UHL3 310 aa12.61□□□□□ -0.39
CSTF1-208ENST00000613138 DNPEPQ9ULA0 475 aa12.61□□□□□ -0.39
CSTF1-208ENST00000613138 SUFUQ9UMX1 484 aa12.61□□□□□ -0.39
CSTF1-208ENST00000613138 RPL26L1Q9UNX3 145 aaKnown RBP12.61□□□□□ -0.39
CSTF1-208ENST00000613138 MSRB2Q9Y3D2 182 aa12.61□□□□□ -0.39
CSTF1-208ENST00000613138 NEUROG3Q9Y4Z2 214 aa12.61□□□□□ -0.39
CSTF1-208ENST00000613138 ACACAQ13085 2346 aa12.61□□□□□ -0.39
CSTF1-208ENST00000613138 ZNF106Q9H2Y7 1883 aaKnown RBP12.61□□□□□ -0.39
CSTF1-208ENST00000613138 ZZEF1O43149 2961 aa12.6□□□□□ -0.39
CSTF1-208ENST00000613138 LOC285095A0A1B0GVY8 99 aa12.6□□□□□ -0.39
CSTF1-208ENST00000613138 GOLGA6L3A6NEY3 463 aa12.6□□□□□ -0.39
CSTF1-208ENST00000613138 MIF4GDA9UHW6 222 aaKnown RBP12.6□□□□□ -0.39
CSTF1-208ENST00000613138 LMO7DNF2Z398 122 aa12.6□□□□□ -0.39
CSTF1-208ENST00000613138 TOR1BO14657 336 aa12.6□□□□□ -0.39
CSTF1-208ENST00000613138 KRT86O43790 486 aa12.6□□□□□ -0.39
CSTF1-208ENST00000613138 USP12O75317 370 aa12.6□□□□□ -0.39
CSTF1-208ENST00000613138 ANXA6P08133 673 aa12.6□□□□□ -0.39
CSTF1-208ENST00000613138 CKMT1AP12532 417 aa12.6□□□□□ -0.39
CSTF1-208ENST00000613138 ZNF30P17039 623 aa12.6□□□□□ -0.39
CSTF1-208ENST00000613138 NFKBIAP25963 317 aa12.6□□□□□ -0.39
CSTF1-208ENST00000613138 INSM1Q01101 510 aaPredicted RBP12.6□□□□□ -0.39
CSTF1-208ENST00000613138 DPTQ07507 201 aa12.6□□□□□ -0.39
CSTF1-208ENST00000613138 SMAD1Q15797 465 aaKnown RBP12.6□□□□□ -0.39
CSTF1-208ENST00000613138 HENMT1Q5T8I9 393 aaKnown RBP12.6□□□□□ -0.39
CSTF1-208ENST00000613138 MEI1Q5TIA1 1274 aa12.6□□□□□ -0.39
CSTF1-208ENST00000613138 EFL1Q7Z2Z2 1120 aaKnown RBP12.6□□□□□ -0.39
CSTF1-208ENST00000613138 CDKL3Q8IVW4 592 aaPredicted RBP12.6□□□□□ -0.39
CSTF1-208ENST00000613138 NDUFAF2Q8N183 169 aa12.6□□□□□ -0.39
CSTF1-208ENST00000613138 TTC30BQ8N4P2 665 aa12.6□□□□□ -0.39
CSTF1-208ENST00000613138 RNF10Q8N5U6 811 aaKnown RBP12.6□□□□□ -0.39
CSTF1-208ENST00000613138 FAM71DQ8N9W8 422 aa12.6□□□□□ -0.39
CSTF1-208ENST00000613138 CCDC112Q8NEF3 446 aa12.6□□□□□ -0.39
CSTF1-208ENST00000613138 IFI44Q8TCB0 444 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms