RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 GOLGA6AQ9NYA3 693 aa7.6□□□□□ -1.19
CUX1-219ENST00000606749 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.6□□□□□ -1.19
CUX1-219ENST00000606749 TAAR2Q9P1P5 351 aa7.6□□□□□ -1.19
CUX1-219ENST00000606749 CD84Q9UIB8 345 aa7.6□□□□□ -1.19
CUX1-219ENST00000606749 ACSL6Q9UKU0 697 aa7.6□□□□□ -1.19
CUX1-219ENST00000606749 NENFQ9UMX5 172 aa7.6□□□□□ -1.19
CUX1-219ENST00000606749 TMEM98Q9Y2Y6 226 aa7.6□□□□□ -1.19
CUX1-219ENST00000606749 ARHGEF17Q96PE2 2063 aaPredicted RBP7.59□□□□□ -1.19
CUX1-219ENST00000606749 A0A0J9YYE9 177 aa7.59□□□□□ -1.19
CUX1-219ENST00000606749 CAPN8A6NHC0 703 aa7.59□□□□□ -1.19
CUX1-219ENST00000606749 RHPN2P1A8MT19 583 aa7.59□□□□□ -1.19
CUX1-219ENST00000606749 AGRPO00253 132 aa7.59□□□□□ -1.19
CUX1-219ENST00000606749 PPM1DO15297 605 aa7.59□□□□□ -1.19
CUX1-219ENST00000606749 MAP3K6O95382 1288 aa7.59□□□□□ -1.19
CUX1-219ENST00000606749 CLDN7O95471 211 aa7.59□□□□□ -1.19
CUX1-219ENST00000606749 SOD1P00441 154 aa7.59□□□□□ -1.19
CUX1-219ENST00000606749 TRBC1P01850 177 aa7.59□□□□□ -1.19
CUX1-219ENST00000606749 KRT10P13645 584 aa7.59□□□□□ -1.19
CUX1-219ENST00000606749 ZNF30P17039 623 aa7.59□□□□□ -1.19
CUX1-219ENST00000606749 ITIH1P19827 911 aa7.59□□□□□ -1.19
CUX1-219ENST00000606749 CD1CP29017 333 aa7.59□□□□□ -1.19
CUX1-219ENST00000606749 HNRNPH3P31942 346 aaKnown RBP7.59□□□□□ -1.19
CUX1-219ENST00000606749 CASP14P31944 242 aa7.59□□□□□ -1.19
CUX1-219ENST00000606749 ETV5P41161 510 aa7.59□□□□□ -1.19
CUX1-219ENST00000606749 GPR1P46091 355 aa7.59□□□□□ -1.19
CUX1-219ENST00000606749 EPHB1P54762 984 aa7.59□□□□□ -1.19
CUX1-219ENST00000606749 TAS2R40P59535 323 aa7.59□□□□□ -1.19
CUX1-219ENST00000606749 CTBSQ01459 385 aa7.59□□□□□ -1.19
CUX1-219ENST00000606749 DSC2Q02487 901 aa7.59□□□□□ -1.19
CUX1-219ENST00000606749 NIPAL4Q0D2K0 466 aa7.59□□□□□ -1.19
CUX1-219ENST00000606749 SLC10A2Q12908 348 aaPredicted RBP7.59□□□□□ -1.19
CUX1-219ENST00000606749 LY6DQ14210 128 aa7.59□□□□□ -1.19
CUX1-219ENST00000606749 NR1D2Q14995 579 aa7.59□□□□□ -1.19
CUX1-219ENST00000606749 PDK2Q15119 407 aa7.59□□□□□ -1.19
CUX1-219ENST00000606749 TGIF1Q15583 401 aa7.59□□□□□ -1.19
CUX1-219ENST00000606749 IFI16Q16666 785 aaKnown RBP7.59□□□□□ -1.19
CUX1-219ENST00000606749 ZSCAN23Q3MJ62 389 aa7.59□□□□□ -1.19
CUX1-219ENST00000606749 AMZ1Q400G9 498 aa7.59□□□□□ -1.19
CUX1-219ENST00000606749 PYCR3Q53H96 274 aa7.59□□□□□ -1.19
CUX1-219ENST00000606749 KIAA1614Q5VZ46 1190 aa7.59□□□□□ -1.19
CUX1-219ENST00000606749 LRRC66Q68CR7 880 aa7.59□□□□□ -1.19
CUX1-219ENST00000606749 ALG1LQ6GMV1 187 aa7.59□□□□□ -1.19
CUX1-219ENST00000606749 SLC30A9Q6PML9 568 aa7.59□□□□□ -1.19
CUX1-219ENST00000606749 ADAMTSL4Q6UY14 1074 aa7.59□□□□□ -1.19
CUX1-219ENST00000606749 ZNF574Q6ZN55 896 aaPredicted RBP7.59□□□□□ -1.19
CUX1-219ENST00000606749 ZNF605Q86T29 641 aa7.59□□□□□ -1.19
CUX1-219ENST00000606749 JAMLQ86YT9 394 aa7.59□□□□□ -1.19
CUX1-219ENST00000606749 MAP7D3Q8IWC1 876 aa7.59□□□□□ -1.19
CUX1-219ENST00000606749 NRSN1Q8IZ57 195 aa7.59□□□□□ -1.19
CUX1-219ENST00000606749 NAGSQ8N159 534 aa7.59□□□□□ -1.19
CUX1-219ENST00000606749 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.59□□□□□ -1.19
CUX1-219ENST00000606749 PQLC3Q8N755 202 aa7.59□□□□□ -1.19
CUX1-219ENST00000606749 ARRDC2Q8TBH0 407 aa7.59□□□□□ -1.19
CUX1-219ENST00000606749 LRRN4Q8WUT4 740 aa7.59□□□□□ -1.19
CUX1-219ENST00000606749 USP7Q93009 1102 aa7.59□□□□□ -1.19
CUX1-219ENST00000606749 SCAMP4Q969E2 229 aa7.59□□□□□ -1.19
CUX1-219ENST00000606749 FAF2Q96CS3 445 aa7.59□□□□□ -1.19
CUX1-219ENST00000606749 AP2M1Q96CW1 435 aa7.59□□□□□ -1.19
CUX1-219ENST00000606749 AGAP2Q99490 1192 aa7.59□□□□□ -1.19
CUX1-219ENST00000606749 CMKLR1Q99788 373 aa7.59□□□□□ -1.19
CUX1-219ENST00000606749 SEMA4CQ9C0C4 833 aa7.59□□□□□ -1.19
CUX1-219ENST00000606749 RDH14Q9HBH5 336 aa7.59□□□□□ -1.19
CUX1-219ENST00000606749 IFNKQ9P0W0 207 aa7.59□□□□□ -1.19
CUX1-219ENST00000606749 CTTNBP2NLQ9P2B4 639 aa7.59□□□□□ -1.19
CUX1-219ENST00000606749 UVRAGQ9P2Y5 699 aa7.59□□□□□ -1.19
CUX1-219ENST00000606749 PISDQ9UG56 409 aa7.59□□□□□ -1.19
CUX1-219ENST00000606749 AMACRQ9UHK6 382 aa7.59□□□□□ -1.19
CUX1-219ENST00000606749 CHKBQ9Y259 395 aa7.59□□□□□ -1.19
CUX1-219ENST00000606749 PLEKHM1Q9Y4G2 1056 aa7.59□□□□□ -1.19
CUX1-219ENST00000606749 LOXL2Q9Y4K0 774 aa7.59□□□□□ -1.19
CUX1-219ENST00000606749 KALRNO60229 2985 aa7.59□□□□□ -1.2
CUX1-219ENST00000606749 PRAMEF33A0A0G2JMD5 474 aa7.58□□□□□ -1.2
CUX1-219ENST00000606749 GOLGA6L19H0YKK7 550 aa7.58□□□□□ -1.2
CUX1-219ENST00000606749 ZW10O43264 779 aa7.58□□□□□ -1.2
CUX1-219ENST00000606749 PRAMEF10O60809 474 aa7.58□□□□□ -1.2
CUX1-219ENST00000606749 PROSCO94903 275 aa7.58□□□□□ -1.2
CUX1-219ENST00000606749 CPNE6O95741 557 aa7.58□□□□□ -1.2
CUX1-219ENST00000606749 MMP2P08253 660 aa7.58□□□□□ -1.2
CUX1-219ENST00000606749 KRT7P08729 469 aa7.58□□□□□ -1.2
CUX1-219ENST00000606749 H2AFZP0C0S5 128 aa7.58□□□□□ -1.2
CUX1-219ENST00000606749 PLA2G2AP14555 144 aa7.58□□□□□ -1.2
CUX1-219ENST00000606749 GJC1P36383 396 aa7.58□□□□□ -1.2
CUX1-219ENST00000606749 GPR3P46089 330 aa7.58□□□□□ -1.2
CUX1-219ENST00000606749 STC1P52823 247 aa7.58□□□□□ -1.2
CUX1-219ENST00000606749 RPL26P61254 145 aaKnown RBP7.58□□□□□ -1.2
CUX1-219ENST00000606749 GBE1Q04446 702 aa7.58□□□□□ -1.2
CUX1-219ENST00000606749 SRSF6Q13247 344 aaKnown RBP7.58□□□□□ -1.2
CUX1-219ENST00000606749 SQSTM1Q13501 440 aa7.58□□□□□ -1.2
CUX1-219ENST00000606749 PEX6Q13608 980 aa7.58□□□□□ -1.2
CUX1-219ENST00000606749 C16orf72Q14CZ0 275 aa7.58□□□□□ -1.2
CUX1-219ENST00000606749 SLC18A3Q16572 532 aa7.58□□□□□ -1.2
CUX1-219ENST00000606749 CLPPQ16740 277 aaPredicted RBP7.58□□□□□ -1.2
CUX1-219ENST00000606749 ASTE1Q2TB18 679 aaPredicted RBP7.58□□□□□ -1.2
CUX1-219ENST00000606749 MAP9Q49MG5 647 aa7.58□□□□□ -1.2
CUX1-219ENST00000606749 PHF19Q5T6S3 580 aa7.58□□□□□ -1.2
CUX1-219ENST00000606749 NKAIN2Q5VXU1 208 aa7.58□□□□□ -1.2
CUX1-219ENST00000606749 DOK6Q6PKX4 331 aa7.58□□□□□ -1.2
CUX1-219ENST00000606749 H2AFVQ71UI9 128 aa7.58□□□□□ -1.2
CUX1-219ENST00000606749 ZNF765Q7L2R6 523 aa7.58□□□□□ -1.2
CUX1-219ENST00000606749 TRIM74Q86UV6 250 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms