RNA–Protein interactions for RNA: ENST00000591598.5

CTDP1-207, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best)

Gene CTDP1, Length 3,228 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-207ENST00000591598 GPR21Q99679 349 aa16.73■□□□□ 0.27
CTDP1-207ENST00000591598 ZBED2Q9BTP6 218 aa16.73■□□□□ 0.27
CTDP1-207ENST00000591598 SLC25A23Q9BV35 468 aa16.73■□□□□ 0.27
CTDP1-207ENST00000591598 WASH4PA8MWX3 477 aa16.72■□□□□ 0.27
CTDP1-207ENST00000591598 BTN3A1O00481 513 aa16.72■□□□□ 0.27
CTDP1-207ENST00000591598 RPP40O75818 363 aaKnown RBP16.72■□□□□ 0.27
CTDP1-207ENST00000591598 BAIAP3O94812 1187 aa16.72■□□□□ 0.27
CTDP1-207ENST00000591598 STAMBPO95630 424 aa16.72■□□□□ 0.27
CTDP1-207ENST00000591598 CLPTM1O96005 669 aa16.72■□□□□ 0.27
CTDP1-207ENST00000591598 DIO3P55073 304 aa16.72■□□□□ 0.27
CTDP1-207ENST00000591598 PTPRNQ16849 979 aa16.72■□□□□ 0.27
CTDP1-207ENST00000591598 RETREG3Q86VR2 466 aa16.72■□□□□ 0.27
CTDP1-207ENST00000591598 CLYBLQ8N0X4 340 aa16.72■□□□□ 0.27
CTDP1-207ENST00000591598 ASB9Q96DX5 294 aa16.72■□□□□ 0.27
CTDP1-207ENST00000591598 C1orf50Q9BV19 199 aa16.72■□□□□ 0.27
CTDP1-207ENST00000591598 POLR3BQ9NW08 1133 aaPredicted RBP16.72■□□□□ 0.27
CTDP1-207ENST00000591598 RNF186Q9NXI6 227 aa16.72■□□□□ 0.27
CTDP1-207ENST00000591598 IKZF3Q9UKT9 509 aa16.72■□□□□ 0.27
CTDP1-207ENST00000591598 LOC285095A0A1B0GVY8 99 aa16.72■□□□□ 0.27
CTDP1-207ENST00000591598 NPEPPSL1A6NEC2 478 aa16.72■□□□□ 0.27
CTDP1-207ENST00000591598 SAC3D1A6NKF1 404 aa16.72■□□□□ 0.27
CTDP1-207ENST00000591598 IQCF5A8MTL0 148 aa16.72■□□□□ 0.27
CTDP1-207ENST00000591598 AZIN1O14977 448 aa16.72■□□□□ 0.27
CTDP1-207ENST00000591598 ANGPT2O15123 496 aa16.72■□□□□ 0.27
CTDP1-207ENST00000591598 SLC22A2O15244 555 aa16.72■□□□□ 0.27
CTDP1-207ENST00000591598 ZRANB3Q5FWF4 1079 aa16.72■□□□□ 0.27
CTDP1-207ENST00000591598 FUNDC1Q8IVP5 155 aa16.72■□□□□ 0.27
CTDP1-207ENST00000591598 PCSK9Q8NBP7 692 aaKnown RBP16.72■□□□□ 0.27
CTDP1-207ENST00000591598 VPS33AQ96AX1 596 aa16.72■□□□□ 0.27
CTDP1-207ENST00000591598 NSMCE3Q96MG7 304 aa16.72■□□□□ 0.27
CTDP1-207ENST00000591598 ACOX2Q99424 681 aa16.72■□□□□ 0.27
CTDP1-207ENST00000591598 TMEM88BA6NKF7 163 aa16.72■□□□□ 0.27
CTDP1-207ENST00000591598 TWF1Q12792 350 aa16.72■□□□□ 0.27
CTDP1-207ENST00000591598 PARP15Q460N3 678 aa16.72■□□□□ 0.27
CTDP1-207ENST00000591598 LARP4Q71RC2 724 aaKnown RBP eCLIP16.72■□□□□ 0.27
CTDP1-207ENST00000591598 RNF180Q86T96 592 aa16.72■□□□□ 0.27
CTDP1-207ENST00000591598 GALNT15Q8N3T1 639 aa16.72■□□□□ 0.27
CTDP1-207ENST00000591598 FBXO39Q8N4B4 442 aa16.72■□□□□ 0.27
CTDP1-207ENST00000591598 DBF4BQ8NFT6 615 aa16.72■□□□□ 0.27
CTDP1-207ENST00000591598 DNAJB14Q8TBM8 379 aa16.72■□□□□ 0.27
CTDP1-207ENST00000591598 BRSK1Q8TDC3 778 aa16.72■□□□□ 0.27
CTDP1-207ENST00000591598 BTBD9Q96Q07 612 aa16.72■□□□□ 0.27
CTDP1-207ENST00000591598 FAM192AQ9GZU8 254 aa16.72■□□□□ 0.27
CTDP1-207ENST00000591598 UPF3AQ9H1J1 476 aaKnown RBP16.72■□□□□ 0.27
CTDP1-207ENST00000591598 ADAM12O43184 909 aa16.71■□□□□ 0.27
CTDP1-207ENST00000591598 PRAMEF11O60813 436 aa16.71■□□□□ 0.27
CTDP1-207ENST00000591598 NIPSNAP2O75323 286 aa16.71■□□□□ 0.27
CTDP1-207ENST00000591598 PAPSS2O95340 614 aaPredicted RBP16.71■□□□□ 0.27
CTDP1-207ENST00000591598 ALDH2P05091 517 aa16.71■□□□□ 0.27
CTDP1-207ENST00000591598 FGF1P05230 155 aa16.71■□□□□ 0.27
CTDP1-207ENST00000591598 XIAPP98170 497 aa16.71■□□□□ 0.27
CTDP1-207ENST00000591598 TAS2R42Q7RTR8 314 aa16.71■□□□□ 0.27
CTDP1-207ENST00000591598 OR6K2Q8NGY2 324 aa16.71■□□□□ 0.27
CTDP1-207ENST00000591598 CANT1Q8WVQ1 401 aa16.71■□□□□ 0.27
CTDP1-207ENST00000591598 CDK15Q96Q40 435 aa16.71■□□□□ 0.27
CTDP1-207ENST00000591598 PTPRDP23468 1912 aa16.71■□□□□ 0.27
CTDP1-207ENST00000591598 IGHA2P01877 340 aa16.71■□□□□ 0.27
CTDP1-207ENST00000591598 MT-ND1P03886 318 aa16.71■□□□□ 0.27
CTDP1-207ENST00000591598 HLA-DPA1P20036 260 aa16.71■□□□□ 0.27
CTDP1-207ENST00000591598 FDXRP22570 491 aa16.71■□□□□ 0.27
CTDP1-207ENST00000591598 SGSHP51688 502 aa16.71■□□□□ 0.27
CTDP1-207ENST00000591598 APLP1P51693 650 aa16.71■□□□□ 0.27
CTDP1-207ENST00000591598 TIAL1Q01085 375 aaKnown RBP eCLIP16.71■□□□□ 0.27
CTDP1-207ENST00000591598 SATB1Q01826 763 aa16.71■□□□□ 0.27
CTDP1-207ENST00000591598 GNA12Q03113 381 aa16.71■□□□□ 0.27
CTDP1-207ENST00000591598 RBBP7Q16576 425 aa16.71■□□□□ 0.27
CTDP1-207ENST00000591598 TRIM71Q2Q1W2 868 aaKnown RBP16.71■□□□□ 0.27
CTDP1-207ENST00000591598 CHSY3Q70JA7 882 aa16.71■□□□□ 0.27
CTDP1-207ENST00000591598 SPPL2CQ8IUH8 684 aa16.71■□□□□ 0.27
CTDP1-207ENST00000591598 RANBP9Q96S59 729 aa16.71■□□□□ 0.27
CTDP1-207ENST00000591598 SLC30A3Q99726 388 aa16.71■□□□□ 0.27
CTDP1-207ENST00000591598 MUC3BQ9H195 1237 aa16.71■□□□□ 0.27
CTDP1-207ENST00000591598 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.71■□□□□ 0.27
CTDP1-207ENST00000591598 NLRC5Q86WI3 1866 aa16.71■□□□□ 0.26
CTDP1-207ENST00000591598 DOCK4Q8N1I0 1966 aa16.7■□□□□ 0.26
CTDP1-207ENST00000591598 PRSS51A0A1B0GVH4 220 aa16.7■□□□□ 0.26
CTDP1-207ENST00000591598 CHRM1P11229 460 aaPredicted RBP16.7■□□□□ 0.26
CTDP1-207ENST00000591598 MTHFD2P13995 350 aa16.7■□□□□ 0.26
CTDP1-207ENST00000591598 ITGB6P18564 788 aa16.7■□□□□ 0.26
CTDP1-207ENST00000591598 DNAJB1P25685 340 aa16.7■□□□□ 0.26
CTDP1-207ENST00000591598 RPL10P27635 214 aaKnown RBP16.7■□□□□ 0.26
CTDP1-207ENST00000591598 STC1P52823 247 aa16.7■□□□□ 0.26
CTDP1-207ENST00000591598 DHFR2Q86XF0 187 aa16.7■□□□□ 0.26
CTDP1-207ENST00000591598 APLFQ8IW19 511 aaPredicted RBP16.7■□□□□ 0.26
CTDP1-207ENST00000591598 SIDT2Q8NBJ9 832 aaKnown RBP16.7■□□□□ 0.26
CTDP1-207ENST00000591598 DLG3Q92796 817 aa16.7■□□□□ 0.26
CTDP1-207ENST00000591598 SLC29A1Q99808 456 aa16.7■□□□□ 0.26
CTDP1-207ENST00000591598 LRFN2Q9ULH4 789 aa16.7■□□□□ 0.26
CTDP1-207ENST00000591598 CLGNO14967 610 aa16.7■□□□□ 0.26
CTDP1-207ENST00000591598 HSPA1AP0DMV8 641 aaKnown RBP16.7■□□□□ 0.26
CTDP1-207ENST00000591598 HSPA1BP0DMV9 641 aaKnown RBP16.7■□□□□ 0.26
CTDP1-207ENST00000591598 SLC11A1P49279 550 aa16.7■□□□□ 0.26
CTDP1-207ENST00000591598 OXCT1P55809 520 aa16.7■□□□□ 0.26
CTDP1-207ENST00000591598 NRG1Q02297 640 aaPredicted RBP16.7■□□□□ 0.26
CTDP1-207ENST00000591598 BBS5Q8N3I7 341 aa16.7■□□□□ 0.26
CTDP1-207ENST00000591598 TEX26Q8N6G2 289 aa16.7■□□□□ 0.26
CTDP1-207ENST00000591598 UBA2Q9UBT2 640 aaPredicted RBP16.7■□□□□ 0.26
CTDP1-207ENST00000591598 FKBPLQ9UIM3 349 aa16.7■□□□□ 0.26
CTDP1-207ENST00000591598 PCDHB7Q9Y5E2 793 aa16.7■□□□□ 0.26
CTDP1-207ENST00000591598 TET1Q8NFU7 2136 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms