RNA–Protein interactions for RNA: ENST00000585741.1

HMG20B-215, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-215ENST00000585741 TTC30BQ8N4P2 665 aa16.89■□□□□ 0.29
HMG20B-215ENST00000585741 OR13C4Q8NGS5 318 aa16.89■□□□□ 0.29
HMG20B-215ENST00000585741 OR2T34Q8NGX1 318 aa16.89■□□□□ 0.29
HMG20B-215ENST00000585741 CDKL2Q92772 493 aa16.89■□□□□ 0.29
HMG20B-215ENST00000585741 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.89■□□□□ 0.29
HMG20B-215ENST00000585741 MFSD3Q96ES6 412 aa16.89■□□□□ 0.29
HMG20B-215ENST00000585741 DNAJC1Q96KC8 554 aaKnown RBP16.89■□□□□ 0.29
HMG20B-215ENST00000585741 C1QTNF7Q9BXJ2 289 aa16.89■□□□□ 0.29
HMG20B-215ENST00000585741 C20orf96Q9NUD7 363 aaPredicted RBP16.89■□□□□ 0.29
HMG20B-215ENST00000585741 NLE1Q9NVX2 485 aaPredicted RBP16.89■□□□□ 0.29
HMG20B-215ENST00000585741 NINJ2Q9NZG7 142 aa16.89■□□□□ 0.29
HMG20B-215ENST00000585741 USP36Q9P275 1121 aaKnown RBP16.89■□□□□ 0.29
HMG20B-215ENST00000585741 EBF1Q9UH73 591 aa16.89■□□□□ 0.29
HMG20B-215ENST00000585741 APPL1Q9UKG1 709 aa16.89■□□□□ 0.29
HMG20B-215ENST00000585741 SLC30A1Q9Y6M5 507 aa16.89■□□□□ 0.29
HMG20B-215ENST00000585741 FAM169AQ9Y6X4 670 aa16.89■□□□□ 0.29
HMG20B-215ENST00000585741 A0A0U1RQS6 177 aa16.88■□□□□ 0.29
HMG20B-215ENST00000585741 DCDC2BA2VCK2 349 aa16.88■□□□□ 0.29
HMG20B-215ENST00000585741 RGSL1A5PLK6 1076 aa16.88■□□□□ 0.29
HMG20B-215ENST00000585741 WNT9AO14904 365 aa16.88■□□□□ 0.29
HMG20B-215ENST00000585741 MAP3K13O43283 966 aa16.88■□□□□ 0.29
HMG20B-215ENST00000585741 RNGTTO60942 597 aaKnown RBP16.88■□□□□ 0.29
HMG20B-215ENST00000585741 SEMA4FO95754 770 aa16.88■□□□□ 0.29
HMG20B-215ENST00000585741 C1SP09871 688 aa16.88■□□□□ 0.29
HMG20B-215ENST00000585741 C6P13671 934 aa16.88■□□□□ 0.29
HMG20B-215ENST00000585741 LHCGRP22888 699 aa16.88■□□□□ 0.29
HMG20B-215ENST00000585741 ZNF140P52738 457 aaPredicted RBP16.88■□□□□ 0.29
HMG20B-215ENST00000585741 STC1P52823 247 aa16.88■□□□□ 0.29
HMG20B-215ENST00000585741 PTSQ03393 145 aa16.88■□□□□ 0.29
HMG20B-215ENST00000585741 RALGDSQ12967 914 aa16.88■□□□□ 0.29
HMG20B-215ENST00000585741 CBLBQ13191 982 aa16.88■□□□□ 0.29
HMG20B-215ENST00000585741 MSLNQ13421 630 aaPredicted RBP16.88■□□□□ 0.29
HMG20B-215ENST00000585741 ZNF284Q2VY69 593 aa16.88■□□□□ 0.29
HMG20B-215ENST00000585741 LAIR1Q6GTX8 287 aa16.88■□□□□ 0.29
HMG20B-215ENST00000585741 ESRP1Q6NXG1 681 aaKnown RBP16.88■□□□□ 0.29
HMG20B-215ENST00000585741 NEK5Q6P3R8 708 aa16.88■□□□□ 0.29
HMG20B-215ENST00000585741 TMEM135Q86UB9 458 aa16.88■□□□□ 0.29
HMG20B-215ENST00000585741 CCDC77Q9BR77 488 aa16.88■□□□□ 0.29
HMG20B-215ENST00000585741 RTKNQ9BST9 563 aa16.88■□□□□ 0.29
HMG20B-215ENST00000585741 CDH19Q9H159 772 aa16.88■□□□□ 0.29
HMG20B-215ENST00000585741 IL17CQ9P0M4 197 aa16.88■□□□□ 0.29
HMG20B-215ENST00000585741 GMEB2Q9UKD1 530 aa16.88■□□□□ 0.29
HMG20B-215ENST00000585741 CACNA1BQ00975 2339 aa16.88■□□□□ 0.29
HMG20B-215ENST00000585741 A0A087WUV0 522 aaPredicted RBP16.87■□□□□ 0.29
HMG20B-215ENST00000585741 PFDN6O15212 129 aa16.87■□□□□ 0.29
HMG20B-215ENST00000585741 VAPBO95292 243 aa16.87■□□□□ 0.29
HMG20B-215ENST00000585741 C7P10643 843 aa16.87■□□□□ 0.29
HMG20B-215ENST00000585741 SSTR1P30872 391 aa16.87■□□□□ 0.29
HMG20B-215ENST00000585741 FNTBP49356 437 aa16.87■□□□□ 0.29
HMG20B-215ENST00000585741 TAS2R38P59533 333 aa16.87■□□□□ 0.29
HMG20B-215ENST00000585741 SRSF5Q13243 272 aaKnown RBP16.87■□□□□ 0.29
HMG20B-215ENST00000585741 PTPRCAPQ14761 206 aa16.87■□□□□ 0.29
HMG20B-215ENST00000585741 CDKN3Q16667 212 aa16.87■□□□□ 0.29
HMG20B-215ENST00000585741 ZRANB3Q5FWF4 1079 aa16.87■□□□□ 0.29
HMG20B-215ENST00000585741 ALS2CLQ60I27 953 aa16.87■□□□□ 0.29
HMG20B-215ENST00000585741 PDPK2PQ6A1A2 396 aa16.87■□□□□ 0.29
HMG20B-215ENST00000585741 KIAA0930Q6ICG6 404 aaPredicted RBP16.87■□□□□ 0.29
HMG20B-215ENST00000585741 AFTPHQ6ULP2 937 aa16.87■□□□□ 0.29
HMG20B-215ENST00000585741 KCNMB4Q86W47 210 aa16.87■□□□□ 0.29
HMG20B-215ENST00000585741 HORMAD1Q86X24 394 aa16.87■□□□□ 0.29
HMG20B-215ENST00000585741 RAVER1Q8IY67 606 aaKnown RBP16.87■□□□□ 0.29
HMG20B-215ENST00000585741 NRSN1Q8IZ57 195 aa16.87■□□□□ 0.29
HMG20B-215ENST00000585741 AGGF1Q8N302 714 aaeCLIP16.87■□□□□ 0.29
HMG20B-215ENST00000585741 CBARPQ8N350 705 aaPredicted RBP16.87■□□□□ 0.29
HMG20B-215ENST00000585741 CALML6Q8TD86 181 aa16.87■□□□□ 0.29
HMG20B-215ENST00000585741 HNRNPLLQ8WVV9 542 aaKnown RBP16.87■□□□□ 0.29
HMG20B-215ENST00000585741 HDAC10Q969S8 669 aa16.87■□□□□ 0.29
HMG20B-215ENST00000585741 NUS1Q96E22 293 aa16.87■□□□□ 0.29
HMG20B-215ENST00000585741 TOE1Q96GM8 510 aaKnown RBP16.87■□□□□ 0.29
HMG20B-215ENST00000585741 CDKN2AIPNLQ96HQ2 116 aa16.87■□□□□ 0.29
HMG20B-215ENST00000585741 TBATAQ96M53 351 aa16.87■□□□□ 0.29
HMG20B-215ENST00000585741 ZNF778Q96MU6 729 aa16.87■□□□□ 0.29
HMG20B-215ENST00000585741 TTC1Q99614 292 aa16.87■□□□□ 0.29
HMG20B-215ENST00000585741 C19orf43Q9BQ61 176 aa16.87■□□□□ 0.29
HMG20B-215ENST00000585741 SPATA16Q9BXB7 569 aa16.87■□□□□ 0.29
HMG20B-215ENST00000585741 FAM83DQ9H4H8 585 aa16.87■□□□□ 0.29
HMG20B-215ENST00000585741 LRRC4CQ9HCJ2 640 aa16.87■□□□□ 0.29
HMG20B-215ENST00000585741 SLC2A6Q9UGQ3 507 aa16.87■□□□□ 0.29
HMG20B-215ENST00000585741 FKBPLQ9UIM3 349 aa16.87■□□□□ 0.29
HMG20B-215ENST00000585741 CDV3Q9UKY7 258 aaKnown RBP16.87■□□□□ 0.29
HMG20B-215ENST00000585741 COQ6Q9Y2Z9 468 aa16.87■□□□□ 0.29
HMG20B-215ENST00000585741 GLYATL1P3A0A0U1RQE8 302 aa16.86■□□□□ 0.29
HMG20B-215ENST00000585741 A0A1W2PQU0 124 aa16.86■□□□□ 0.29
HMG20B-215ENST00000585741 IGLON5A6NGN9 336 aa16.86■□□□□ 0.29
HMG20B-215ENST00000585741 RECQL5O94762 991 aaPredicted RBP16.86■□□□□ 0.29
HMG20B-215ENST00000585741 RETP07949 1114 aa16.86■□□□□ 0.29
HMG20B-215ENST00000585741 ITGALP20701 1170 aa16.86■□□□□ 0.29
HMG20B-215ENST00000585741 MC4RP32245 332 aa16.86■□□□□ 0.29
HMG20B-215ENST00000585741 ACSL1P33121 698 aa16.86■□□□□ 0.29
HMG20B-215ENST00000585741 PPARGP37231 505 aaPredicted RBP16.86■□□□□ 0.29
HMG20B-215ENST00000585741 ETV3P41162 512 aa16.86■□□□□ 0.29
HMG20B-215ENST00000585741 SPINT3P49223 89 aa16.86■□□□□ 0.29
HMG20B-215ENST00000585741 SETMARQ53H47 684 aaPredicted RBP16.86■□□□□ 0.29
HMG20B-215ENST00000585741 FASTKD1Q53R41 847 aaKnown RBP16.86■□□□□ 0.29
HMG20B-215ENST00000585741 STEAP4Q687X5 459 aa16.86■□□□□ 0.29
HMG20B-215ENST00000585741 FAM151BQ6UXP7 276 aa16.86■□□□□ 0.29
HMG20B-215ENST00000585741 SLC36A4Q6YBV0 504 aa16.86■□□□□ 0.29
HMG20B-215ENST00000585741 Q6ZVL8 140 aa16.86■□□□□ 0.29
HMG20B-215ENST00000585741 HSD11B1LQ7Z5J1 315 aa16.86■□□□□ 0.29
HMG20B-215ENST00000585741 SDCCAG8Q86SQ7 713 aaPredicted RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms