RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 ZNF548Q8NEK5 533 aaPredicted RBP13.77□□□□□ -0.21
PRKCSH-202ENST00000585540 IPMKQ8NFU5 416 aa13.77□□□□□ -0.21
PRKCSH-202ENST00000585540 SCG3Q8WXD2 468 aaKnown RBP13.77□□□□□ -0.21
PRKCSH-202ENST00000585540 FUBP1Q96AE4 644 aaKnown RBP13.77□□□□□ -0.21
PRKCSH-202ENST00000585540 OXNAD1Q96HP4 312 aaPredicted RBP13.77□□□□□ -0.21
PRKCSH-202ENST00000585540 WDR24Q96S15 920 aa13.77□□□□□ -0.21
PRKCSH-202ENST00000585540 GPR63Q9BZJ6 419 aa13.77□□□□□ -0.21
PRKCSH-202ENST00000585540 ABCG8Q9H221 673 aa13.77□□□□□ -0.21
PRKCSH-202ENST00000585540 FAM83DQ9H4H8 585 aa13.77□□□□□ -0.21
PRKCSH-202ENST00000585540 LRRC40Q9H9A6 602 aa13.77□□□□□ -0.21
PRKCSH-202ENST00000585540 RMI1Q9H9A7 625 aa13.77□□□□□ -0.21
PRKCSH-202ENST00000585540 ARNT2Q9HBZ2 717 aa13.77□□□□□ -0.21
PRKCSH-202ENST00000585540 VPS18Q9P253 973 aa13.77□□□□□ -0.21
PRKCSH-202ENST00000585540 PAK5Q9P286 719 aa13.77□□□□□ -0.21
PRKCSH-202ENST00000585540 DRG1Q9Y295 367 aaKnown RBP13.77□□□□□ -0.21
PRKCSH-202ENST00000585540 SPTBN4Q9H254 2564 aa13.76□□□□□ -0.21
PRKCSH-202ENST00000585540 A8MX80 341 aa13.76□□□□□ -0.21
PRKCSH-202ENST00000585540 LMO7DNF2Z398 122 aa13.76□□□□□ -0.21
PRKCSH-202ENST00000585540 AP3B1O00203 1094 aa13.76□□□□□ -0.21
PRKCSH-202ENST00000585540 CEP104O60308 925 aa13.76□□□□□ -0.21
PRKCSH-202ENST00000585540 CLDN7O95471 211 aa13.76□□□□□ -0.21
PRKCSH-202ENST00000585540 IVLP07476 585 aa13.76□□□□□ -0.21
PRKCSH-202ENST00000585540 CTSEP14091 401 aa13.76□□□□□ -0.21
PRKCSH-202ENST00000585540 PSMB4P28070 264 aa13.76□□□□□ -0.21
PRKCSH-202ENST00000585540 RPIAP49247 311 aa13.76□□□□□ -0.21
PRKCSH-202ENST00000585540 SRP54P61011 504 aaKnown RBP13.76□□□□□ -0.21
PRKCSH-202ENST00000585540 SIM1P81133 766 aaPredicted RBP13.76□□□□□ -0.21
PRKCSH-202ENST00000585540 IL9RQ01113 521 aa13.76□□□□□ -0.21
PRKCSH-202ENST00000585540 SIX1Q15475 284 aaPredicted RBP13.76□□□□□ -0.21
PRKCSH-202ENST00000585540 FAXCQ5TGI0 409 aa13.76□□□□□ -0.21
PRKCSH-202ENST00000585540 DENND2CQ68D51 928 aa13.76□□□□□ -0.21
PRKCSH-202ENST00000585540 RANBP10Q6VN20 620 aa13.76□□□□□ -0.21
PRKCSH-202ENST00000585540 GLT6D1Q7Z4J2 308 aa13.76□□□□□ -0.21
PRKCSH-202ENST00000585540 HEATR4Q86WZ0 1026 aa13.76□□□□□ -0.21
PRKCSH-202ENST00000585540 TRAM1L1Q8N609 369 aa13.76□□□□□ -0.21
PRKCSH-202ENST00000585540 CCDC110Q8TBZ0 833 aa13.76□□□□□ -0.21
PRKCSH-202ENST00000585540 ATG4AQ8WYN0 398 aa13.76□□□□□ -0.21
PRKCSH-202ENST00000585540 TMEM121Q9BTD3 319 aa13.76□□□□□ -0.21
PRKCSH-202ENST00000585540 TRNAU1APQ9NX07 287 aaKnown RBP13.76□□□□□ -0.21
PRKCSH-202ENST00000585540 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.76□□□□□ -0.21
PRKCSH-202ENST00000585540 ZNF148Q9UQR1 794 aa13.76□□□□□ -0.21
PRKCSH-202ENST00000585540 PKP3Q9Y446 797 aa13.76□□□□□ -0.21
PRKCSH-202ENST00000585540 OR1A2Q9Y585 309 aa13.76□□□□□ -0.21
PRKCSH-202ENST00000585540 CACNA1AO00555 2505 aa13.76□□□□□ -0.21
PRKCSH-202ENST00000585540 LRP4O75096 1905 aa13.76□□□□□ -0.21
PRKCSH-202ENST00000585540 PRSS38A1L453 326 aa13.75□□□□□ -0.21
PRKCSH-202ENST00000585540 C2orf81A6NN90 581 aa13.75□□□□□ -0.21
PRKCSH-202ENST00000585540 DKK1O94907 266 aa13.75□□□□□ -0.21
PRKCSH-202ENST00000585540 CRTAMO95727 393 aa13.75□□□□□ -0.21
PRKCSH-202ENST00000585540 GAS8O95995 478 aa13.75□□□□□ -0.21
PRKCSH-202ENST00000585540 FGGP02679 453 aa13.75□□□□□ -0.21
PRKCSH-202ENST00000585540 ANXA6P08133 673 aa13.75□□□□□ -0.21
PRKCSH-202ENST00000585540 FTH1P19P0C7X4 201 aa13.75□□□□□ -0.21
PRKCSH-202ENST00000585540 TCP1P17987 556 aaKnown RBP13.75□□□□□ -0.21
PRKCSH-202ENST00000585540 ACP1P24666 158 aa13.75□□□□□ -0.21
PRKCSH-202ENST00000585540 PMLP29590 882 aa13.75□□□□□ -0.21
PRKCSH-202ENST00000585540 ADRA1AP35348 466 aa13.75□□□□□ -0.21
PRKCSH-202ENST00000585540 SHC2P98077 582 aa13.75□□□□□ -0.21
PRKCSH-202ENST00000585540 SEMG2Q02383 582 aa13.75□□□□□ -0.21
PRKCSH-202ENST00000585540 BNIP3Q12983 259 aa13.75□□□□□ -0.21
PRKCSH-202ENST00000585540 LAMB3Q13751 1172 aa13.75□□□□□ -0.21
PRKCSH-202ENST00000585540 LRP8Q14114 963 aa13.75□□□□□ -0.21
PRKCSH-202ENST00000585540 LONRF2Q1L5Z9 754 aa13.75□□□□□ -0.21
PRKCSH-202ENST00000585540 ALG11Q2TAA5 492 aa13.75□□□□□ -0.21
PRKCSH-202ENST00000585540 SIRPB2Q5JXA9 342 aa13.75□□□□□ -0.21
PRKCSH-202ENST00000585540 LYSMD3Q7Z3D4 306 aa13.75□□□□□ -0.21
PRKCSH-202ENST00000585540 GATAD2AQ86YP4 633 aa13.75□□□□□ -0.21
PRKCSH-202ENST00000585540 CCDC89Q8N998 374 aa13.75□□□□□ -0.21
PRKCSH-202ENST00000585540 FAM71DQ8N9W8 422 aa13.75□□□□□ -0.21
PRKCSH-202ENST00000585540 PLA2G15Q8NCC3 412 aa13.75□□□□□ -0.21
PRKCSH-202ENST00000585540 OR6C4Q8NGE1 309 aa13.75□□□□□ -0.21
PRKCSH-202ENST00000585540 COG1Q8WTW3 980 aa13.75□□□□□ -0.21
PRKCSH-202ENST00000585540 ADAMTS14Q8WXS8 1223 aa13.75□□□□□ -0.21
PRKCSH-202ENST00000585540 SCARF2Q96GP6 870 aaPredicted RBP13.75□□□□□ -0.21
PRKCSH-202ENST00000585540 COX14Q96I36 57 aa13.75□□□□□ -0.21
PRKCSH-202ENST00000585540 HIC2Q96JB3 615 aa13.75□□□□□ -0.21
PRKCSH-202ENST00000585540 CNDP2Q96KP4 475 aaKnown RBP13.75□□□□□ -0.21
PRKCSH-202ENST00000585540 VPS35Q96QK1 796 aa13.75□□□□□ -0.21
PRKCSH-202ENST00000585540 OSBPL9Q96SU4 736 aa13.75□□□□□ -0.21
PRKCSH-202ENST00000585540 LRRC61Q9BV99 259 aa13.75□□□□□ -0.21
PRKCSH-202ENST00000585540 FRMD8Q9BZ67 464 aaPredicted RBP13.75□□□□□ -0.21
PRKCSH-202ENST00000585540 SMARCAL1Q9NZC9 954 aa13.75□□□□□ -0.21
PRKCSH-202ENST00000585540 UBP1Q9NZI7 540 aa13.75□□□□□ -0.21
PRKCSH-202ENST00000585540 SNX12Q9UMY4 172 aa13.75□□□□□ -0.21
PRKCSH-202ENST00000585540 DOLKQ9UPQ8 538 aa13.75□□□□□ -0.21
PRKCSH-202ENST00000585540 SLC17A4Q9Y2C5 497 aa13.75□□□□□ -0.21
PRKCSH-202ENST00000585540 GOLGA6L10A0A0M3HER8 536 aa13.74□□□□□ -0.21
PRKCSH-202ENST00000585540 AP2A1O95782 977 aa13.74□□□□□ -0.21
PRKCSH-202ENST00000585540 GP1BAP07359 652 aa13.74□□□□□ -0.21
PRKCSH-202ENST00000585540 CKMT2P17540 419 aa13.74□□□□□ -0.21
PRKCSH-202ENST00000585540 SPAM1P38567 509 aa13.74□□□□□ -0.21
PRKCSH-202ENST00000585540 HADHAP40939 763 aa13.74□□□□□ -0.21
PRKCSH-202ENST00000585540 ITGA9Q13797 1035 aa13.74□□□□□ -0.21
PRKCSH-202ENST00000585540 TAF1AQ15573 450 aaPredicted RBP13.74□□□□□ -0.21
PRKCSH-202ENST00000585540 PROX2Q3B8N5 592 aa13.74□□□□□ -0.21
PRKCSH-202ENST00000585540 PRRT3Q5FWE3 981 aa13.74□□□□□ -0.21
PRKCSH-202ENST00000585540 C6orf132Q5T0Z8 1188 aa13.74□□□□□ -0.21
PRKCSH-202ENST00000585540 ARMC3Q5W041 872 aa13.74□□□□□ -0.21
PRKCSH-202ENST00000585540 KCTD11Q693B1 232 aa13.74□□□□□ -0.21
PRKCSH-202ENST00000585540 PHYKPLQ8IUZ5 450 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms