RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 RRM2BQ7LG56 351 aa3.26□□□□□ -1.89
SMCHD1-206ENST00000581631 GTSCR1Q86UQ5 136 aa3.26□□□□□ -1.89
SMCHD1-206ENST00000581631 FOXRED2Q8IWF2 684 aa3.26□□□□□ -1.89
SMCHD1-206ENST00000581631 METTL27Q8N6F8 245 aaPredicted RBP3.26□□□□□ -1.89
SMCHD1-206ENST00000581631 AGBL3Q8NEM8 1001 aa3.26□□□□□ -1.89
SMCHD1-206ENST00000581631 MYRIPQ8NFW9 859 aa3.26□□□□□ -1.89
SMCHD1-206ENST00000581631 BBS10Q8TAM1 723 aa3.26□□□□□ -1.89
SMCHD1-206ENST00000581631 RND1Q92730 232 aa3.26□□□□□ -1.89
SMCHD1-206ENST00000581631 HVCN1Q96D96 273 aa3.26□□□□□ -1.89
SMCHD1-206ENST00000581631 KIF1BPQ96EK5 621 aa3.26□□□□□ -1.89
SMCHD1-206ENST00000581631 APOPT1Q96IL0 206 aa3.26□□□□□ -1.89
SMCHD1-206ENST00000581631 KLHL15Q96M94 604 aa3.26□□□□□ -1.89
SMCHD1-206ENST00000581631 KXD1Q9BQD3 176 aa3.26□□□□□ -1.89
SMCHD1-206ENST00000581631 FUZQ9BT04 418 aa3.26□□□□□ -1.89
SMCHD1-206ENST00000581631 HAUS8Q9BT25 410 aa3.26□□□□□ -1.89
SMCHD1-206ENST00000581631 PCDH9Q9HC56 1237 aa3.26□□□□□ -1.89
SMCHD1-206ENST00000581631 BPIFA1Q9NP55 256 aa3.26□□□□□ -1.89
SMCHD1-206ENST00000581631 CNGB3Q9NQW8 809 aa3.26□□□□□ -1.89
SMCHD1-206ENST00000581631 TMEM30AQ9NV96 361 aa3.26□□□□□ -1.89
SMCHD1-206ENST00000581631 SAGE1Q9NXZ1 904 aa3.26□□□□□ -1.89
SMCHD1-206ENST00000581631 SLC25A10Q9UBX3 287 aaPredicted RBP3.26□□□□□ -1.89
SMCHD1-206ENST00000581631 RCOR1Q9UKL0 485 aa3.26□□□□□ -1.89
SMCHD1-206ENST00000581631 RALYQ9UKM9 306 aaKnown RBP3.26□□□□□ -1.89
SMCHD1-206ENST00000581631 TBX20Q9UMR3 447 aa3.26□□□□□ -1.89
SMCHD1-206ENST00000581631 LSM4Q9Y4Z0 139 aaKnown RBP3.26□□□□□ -1.89
SMCHD1-206ENST00000581631 AGRNO00468 2067 aa3.26□□□□□ -1.89
SMCHD1-206ENST00000581631 ATXN2Q99700 1313 aaKnown RBP3.25□□□□□ -1.89
SMCHD1-206ENST00000581631 KIAA1210Q9ULL0 1709 aa3.25□□□□□ -1.89
SMCHD1-206ENST00000581631 SNAP23O00161 211 aa3.25□□□□□ -1.89
SMCHD1-206ENST00000581631 NCAM2O15394 837 aa3.25□□□□□ -1.89
SMCHD1-206ENST00000581631 MT-CYBP00156 380 aaPredicted RBP3.25□□□□□ -1.89
SMCHD1-206ENST00000581631 TFP02787 698 aa3.25□□□□□ -1.89
SMCHD1-206ENST00000581631 MMP2P08253 660 aa3.25□□□□□ -1.89
SMCHD1-206ENST00000581631 SHMT1P34896 483 aa3.25□□□□□ -1.89
SMCHD1-206ENST00000581631 CAMK1Q14012 370 aa3.25□□□□□ -1.89
SMCHD1-206ENST00000581631 RNPS1Q15287 305 aaKnown RBP3.25□□□□□ -1.89
SMCHD1-206ENST00000581631 HIST2H2ACQ16777 129 aaPredicted RBP3.25□□□□□ -1.89
SMCHD1-206ENST00000581631 EIF2S3LQ2VIR3 472 aaKnown RBP3.25□□□□□ -1.89
SMCHD1-206ENST00000581631 TXNDC8Q6A555 127 aa3.25□□□□□ -1.89
SMCHD1-206ENST00000581631 HIST2H2BDQ6DRA6 164 aa3.25□□□□□ -1.89
SMCHD1-206ENST00000581631 MTSS1LQ765P7 747 aa3.25□□□□□ -1.89
SMCHD1-206ENST00000581631 ZNF354CQ86Y25 554 aa3.25□□□□□ -1.89
SMCHD1-206ENST00000581631 DSELQ8IZU8 1212 aa3.25□□□□□ -1.89
SMCHD1-206ENST00000581631 CPXCR1Q8N123 301 aa3.25□□□□□ -1.89
SMCHD1-206ENST00000581631 ZBTB2Q8N680 514 aa3.25□□□□□ -1.89
SMCHD1-206ENST00000581631 BEST2Q8NFU1 509 aa3.25□□□□□ -1.89
SMCHD1-206ENST00000581631 ZCCHC10Q8TBK6 192 aa3.25□□□□□ -1.89
SMCHD1-206ENST00000581631 SLC20A1Q8WUM9 679 aa3.25□□□□□ -1.89
SMCHD1-206ENST00000581631 ASCL2Q99929 193 aa3.25□□□□□ -1.89
SMCHD1-206ENST00000581631 GLIS2Q9BZE0 524 aaPredicted RBP3.25□□□□□ -1.89
SMCHD1-206ENST00000581631 TKTL2Q9H0I9 626 aa3.25□□□□□ -1.89
SMCHD1-206ENST00000581631 ESRP2Q9H6T0 727 aaKnown RBP3.25□□□□□ -1.89
SMCHD1-206ENST00000581631 C17orf75Q9HAS0 396 aa3.25□□□□□ -1.89
SMCHD1-206ENST00000581631 MKKSQ9NPJ1 570 aaPredicted RBP3.25□□□□□ -1.89
SMCHD1-206ENST00000581631 TINAGQ9UJW2 476 aa3.25□□□□□ -1.89
SMCHD1-206ENST00000581631 FBXO9Q9UK97 447 aaPredicted RBP3.25□□□□□ -1.89
SMCHD1-206ENST00000581631 STON1Q9Y6Q2 735 aa3.25□□□□□ -1.89
SMCHD1-206ENST00000581631 TMEM202A6NGA9 273 aa3.24□□□□□ -1.89
SMCHD1-206ENST00000581631 TSPAN4O14817 238 aa3.24□□□□□ -1.89
SMCHD1-206ENST00000581631 LDLRAD4O15165 306 aa3.24□□□□□ -1.89
SMCHD1-206ENST00000581631 PYGLP06737 847 aa3.24□□□□□ -1.89
SMCHD1-206ENST00000581631 COX7A2P14406 83 aa3.24□□□□□ -1.89
SMCHD1-206ENST00000581631 ITGA2P17301 1181 aa3.24□□□□□ -1.89
SMCHD1-206ENST00000581631 GNB1P62873 340 aa3.24□□□□□ -1.89
SMCHD1-206ENST00000581631 ZRSR2Q15696 482 aaKnown RBP3.24□□□□□ -1.89
SMCHD1-206ENST00000581631 SLC9B1Q4ZJI4 515 aa3.24□□□□□ -1.89
SMCHD1-206ENST00000581631 SPINK14Q6IE38 97 aa3.24□□□□□ -1.89
SMCHD1-206ENST00000581631 SLC36A4Q6YBV0 504 aa3.24□□□□□ -1.89
SMCHD1-206ENST00000581631 LINGO2Q7L985 606 aa3.24□□□□□ -1.89
SMCHD1-206ENST00000581631 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.24□□□□□ -1.89
SMCHD1-206ENST00000581631 TRIM58Q8NG06 486 aa3.24□□□□□ -1.89
SMCHD1-206ENST00000581631 OR10V1Q8NGI7 309 aa3.24□□□□□ -1.89
SMCHD1-206ENST00000581631 HUS1BQ8NHY5 278 aa3.24□□□□□ -1.89
SMCHD1-206ENST00000581631 HTRA1Q92743 480 aa3.24□□□□□ -1.89
SMCHD1-206ENST00000581631 PABPC5Q96DU9 382 aaKnown RBP3.24□□□□□ -1.89
SMCHD1-206ENST00000581631 VEZTQ9HBM0 779 aa3.24□□□□□ -1.89
SMCHD1-206ENST00000581631 GPR108Q9NPR9 543 aa3.24□□□□□ -1.89
SMCHD1-206ENST00000581631 MCM9Q9NXL9 1143 aa3.24□□□□□ -1.89
SMCHD1-206ENST00000581631 PRSS21Q9Y6M0 314 aa3.24□□□□□ -1.89
SMCHD1-206ENST00000581631 HOXC11O43248 304 aaPredicted RBP3.23□□□□□ -1.89
SMCHD1-206ENST00000581631 IRF1P10914 325 aa3.23□□□□□ -1.89
SMCHD1-206ENST00000581631 DCTP40126 519 aa3.23□□□□□ -1.89
SMCHD1-206ENST00000581631 IL15P40933 162 aaPredicted RBP3.23□□□□□ -1.89
SMCHD1-206ENST00000581631 LUMP51884 338 aaPredicted RBP3.23□□□□□ -1.89
SMCHD1-206ENST00000581631 KRTAP12-2P59991 146 aa3.23□□□□□ -1.89
SMCHD1-206ENST00000581631 VAMP2P63027 116 aa3.23□□□□□ -1.89
SMCHD1-206ENST00000581631 SORDQ00796 357 aa3.23□□□□□ -1.89
SMCHD1-206ENST00000581631 CTF1Q16619 201 aa3.23□□□□□ -1.89
SMCHD1-206ENST00000581631 C2orf68Q2NKX9 166 aa3.23□□□□□ -1.89
SMCHD1-206ENST00000581631 SLC45A4Q5BKX6 768 aa3.23□□□□□ -1.89
SMCHD1-206ENST00000581631 KCNT1Q5JUK3 1230 aa3.23□□□□□ -1.89
SMCHD1-206ENST00000581631 STXBP5Q5T5C0 1151 aa3.23□□□□□ -1.89
SMCHD1-206ENST00000581631 FAM69AQ5T7M9 428 aa3.23□□□□□ -1.89
SMCHD1-206ENST00000581631 SLC9C2Q5TAH2 1124 aa3.23□□□□□ -1.89
SMCHD1-206ENST00000581631 NAA35Q5VZE5 725 aa3.23□□□□□ -1.89
SMCHD1-206ENST00000581631 BSPRYQ5W0U4 402 aa3.23□□□□□ -1.89
SMCHD1-206ENST00000581631 TAOK1Q7L7X3 1001 aa3.23□□□□□ -1.89
SMCHD1-206ENST00000581631 KMT5CQ86Y97 462 aa3.23□□□□□ -1.89
SMCHD1-206ENST00000581631 WDR63Q8IWG1 891 aa3.23□□□□□ -1.89
SMCHD1-206ENST00000581631 C1orf87Q8N0U7 546 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms