RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 ZUFSPQ96AP4 578 aa8.93□□□□□ -0.98
NCBP3-204ENST00000574911 CYP2S1Q96SQ9 504 aa8.93□□□□□ -0.98
NCBP3-204ENST00000574911 RBM38Q9H0Z9 239 aaKnown RBP8.93□□□□□ -0.98
NCBP3-204ENST00000574911 TUBB1Q9H4B7 451 aa8.93□□□□□ -0.98
NCBP3-204ENST00000574911 TLR8Q9NR97 1041 aaKnown RBP8.93□□□□□ -0.98
NCBP3-204ENST00000574911 ARMC1Q9NVT9 282 aa8.93□□□□□ -0.98
NCBP3-204ENST00000574911 GMPR2Q9P2T1 348 aaKnown RBP8.93□□□□□ -0.98
NCBP3-204ENST00000574911 PRG3Q9Y2Y8 225 aaPredicted RBP8.93□□□□□ -0.98
NCBP3-204ENST00000574911 NDUFAF1Q9Y375 327 aa8.93□□□□□ -0.98
NCBP3-204ENST00000574911 AK5Q9Y6K8 562 aa8.93□□□□□ -0.98
NCBP3-204ENST00000574911 SOAT2O75908 522 aa8.92□□□□□ -0.98
NCBP3-204ENST00000574911 CSPG5O95196 566 aa8.92□□□□□ -0.98
NCBP3-204ENST00000574911 PSMC3P17980 439 aa8.92□□□□□ -0.98
NCBP3-204ENST00000574911 TACR2P21452 398 aa8.92□□□□□ -0.98
NCBP3-204ENST00000574911 STC1P52823 247 aa8.92□□□□□ -0.98
NCBP3-204ENST00000574911 SH3BGRP55822 239 aaPredicted RBP8.92□□□□□ -0.98
NCBP3-204ENST00000574911 TAF10Q12962 218 aa8.92□□□□□ -0.98
NCBP3-204ENST00000574911 ZNF235Q14590 738 aa8.92□□□□□ -0.98
NCBP3-204ENST00000574911 NRF1Q16656 503 aa8.92□□□□□ -0.98
NCBP3-204ENST00000574911 KIF19Q2TAC6 998 aa8.92□□□□□ -0.98
NCBP3-204ENST00000574911 C5orf22Q49AR2 442 aa8.92□□□□□ -0.98
NCBP3-204ENST00000574911 SETMARQ53H47 684 aaPredicted RBP8.92□□□□□ -0.98
NCBP3-204ENST00000574911 MTX3Q5HYI7 312 aa8.92□□□□□ -0.98
NCBP3-204ENST00000574911 C10orf120Q5SQS8 335 aa8.92□□□□□ -0.98
NCBP3-204ENST00000574911 AP1ARQ63HQ0 302 aa8.92□□□□□ -0.98
NCBP3-204ENST00000574911 PRMT9Q6P2P2 845 aa8.92□□□□□ -0.98
NCBP3-204ENST00000574911 SLC24A5Q71RS6 500 aa8.92□□□□□ -0.98
NCBP3-204ENST00000574911 CARM1Q86X55 608 aa8.92□□□□□ -0.98
NCBP3-204ENST00000574911 MIER2Q8N344 545 aa8.92□□□□□ -0.98
NCBP3-204ENST00000574911 MINDY1Q8N5J2 469 aa8.92□□□□□ -0.98
NCBP3-204ENST00000574911 OR2T34Q8NGX1 318 aa8.92□□□□□ -0.98
NCBP3-204ENST00000574911 OR2T3Q8NH03 318 aa8.92□□□□□ -0.98
NCBP3-204ENST00000574911 KIAA1191Q96A73 305 aa8.92□□□□□ -0.98
NCBP3-204ENST00000574911 CDKN2AIPNLQ96HQ2 116 aa8.92□□□□□ -0.98
NCBP3-204ENST00000574911 LRCH3Q96II8 777 aa8.92□□□□□ -0.98
NCBP3-204ENST00000574911 NSUN5Q96P11 429 aaKnown RBP8.92□□□□□ -0.98
NCBP3-204ENST00000574911 PRPF18Q99633 342 aaKnown RBP8.92□□□□□ -0.98
NCBP3-204ENST00000574911 SLC39A3Q9BRY0 314 aa8.92□□□□□ -0.98
NCBP3-204ENST00000574911 OSBPL11Q9BXB4 747 aa8.92□□□□□ -0.98
NCBP3-204ENST00000574911 RRAGCQ9HB90 399 aa8.92□□□□□ -0.98
NCBP3-204ENST00000574911 INTS10Q9NVR2 710 aaKnown RBP8.92□□□□□ -0.98
NCBP3-204ENST00000574911 NLE1Q9NVX2 485 aaPredicted RBP8.92□□□□□ -0.98
NCBP3-204ENST00000574911 GIMAP2Q9UG22 337 aa8.92□□□□□ -0.98
NCBP3-204ENST00000574911 PTGDR2Q9Y5Y4 395 aa8.92□□□□□ -0.98
NCBP3-204ENST00000574911 MYOCOSA0A1B0GUC4 107 aa8.92□□□□□ -0.98
NCBP3-204ENST00000574911 NR5A2O00482 541 aa8.92□□□□□ -0.98
NCBP3-204ENST00000574911 NME4O00746 187 aa8.92□□□□□ -0.98
NCBP3-204ENST00000574911 KERAO60938 352 aa8.92□□□□□ -0.98
NCBP3-204ENST00000574911 MATN4O95460 622 aa8.92□□□□□ -0.98
NCBP3-204ENST00000574911 NDST3O95803 873 aa8.92□□□□□ -0.98
NCBP3-204ENST00000574911 MYCNP04198 464 aaPredicted RBP8.92□□□□□ -0.98
NCBP3-204ENST00000574911 PRSS56P0CW18 603 aa8.92□□□□□ -0.98
NCBP3-204ENST00000574911 HSPA8P11142 646 aaKnown RBP8.92□□□□□ -0.98
NCBP3-204ENST00000574911 ATP6V1B2P21281 511 aa8.92□□□□□ -0.98
NCBP3-204ENST00000574911 MYLK3Q32MK0 819 aa8.92□□□□□ -0.98
NCBP3-204ENST00000574911 CTXN3Q4LDR2 81 aa8.92□□□□□ -0.98
NCBP3-204ENST00000574911 PITRM1Q5JRX3 1037 aa8.92□□□□□ -0.98
NCBP3-204ENST00000574911 TRAF7Q6Q0C0 670 aa8.92□□□□□ -0.98
NCBP3-204ENST00000574911 TRPC4APQ8TEL6 797 aa8.92□□□□□ -0.98
NCBP3-204ENST00000574911 NMD3Q96D46 503 aaKnown RBP8.92□□□□□ -0.98
NCBP3-204ENST00000574911 SLC29A1Q99808 456 aa8.92□□□□□ -0.98
NCBP3-204ENST00000574911 MGME1Q9BQP7 344 aa8.92□□□□□ -0.98
NCBP3-204ENST00000574911 EFHD1Q9BUP0 239 aa8.92□□□□□ -0.98
NCBP3-204ENST00000574911 ARHGAP39Q9C0H5 1083 aa8.92□□□□□ -0.98
NCBP3-204ENST00000574911 DERL2Q9GZP9 239 aa8.92□□□□□ -0.98
NCBP3-204ENST00000574911 SYTL2Q9HCH5 934 aa8.92□□□□□ -0.98
NCBP3-204ENST00000574911 SLC52A3Q9NQ40 469 aa8.92□□□□□ -0.98
NCBP3-204ENST00000574911 COMMD8Q9NX08 183 aa8.92□□□□□ -0.98
NCBP3-204ENST00000574911 PTTG2Q9NZH5 202 aa8.92□□□□□ -0.98
NCBP3-204ENST00000574911 IKZF3Q9UKT9 509 aa8.92□□□□□ -0.98
NCBP3-204ENST00000574911 MED16Q9Y2X0 877 aa8.92□□□□□ -0.98
NCBP3-204ENST00000574911 SNX13Q9Y5W8 968 aa8.92□□□□□ -0.98
NCBP3-204ENST00000574911 OR6C75A6NL08 312 aa8.91□□□□□ -0.98
NCBP3-204ENST00000574911 ZNF839A8K0R7 811 aa8.91□□□□□ -0.98
NCBP3-204ENST00000574911 CLASP2O75122 1294 aaKnown RBP8.91□□□□□ -0.98
NCBP3-204ENST00000574911 VNN2O95498 520 aa8.91□□□□□ -0.98
NCBP3-204ENST00000574911 SERPINF2P08697 491 aa8.91□□□□□ -0.98
NCBP3-204ENST00000574911 ZDHHC11BP0C7U3 371 aa8.91□□□□□ -0.98
NCBP3-204ENST00000574911 PIRTP0C851 137 aa8.91□□□□□ -0.98
NCBP3-204ENST00000574911 BMP2P12643 396 aa8.91□□□□□ -0.98
NCBP3-204ENST00000574911 LBPP18428 481 aa8.91□□□□□ -0.98
NCBP3-204ENST00000574911 CAPN3P20807 821 aa8.91□□□□□ -0.98
NCBP3-204ENST00000574911 FGFR3P22607 806 aa8.91□□□□□ -0.98
NCBP3-204ENST00000574911 PSMA3P25788 255 aa8.91□□□□□ -0.98
NCBP3-204ENST00000574911 CST5P28325 142 aaPredicted RBP8.91□□□□□ -0.98
NCBP3-204ENST00000574911 ZNF140P52738 457 aaPredicted RBP8.91□□□□□ -0.98
NCBP3-204ENST00000574911 NME5P56597 212 aa8.91□□□□□ -0.98
NCBP3-204ENST00000574911 ADRM1Q16186 407 aa8.91□□□□□ -0.98
NCBP3-204ENST00000574911 GPR162Q16538 588 aa8.91□□□□□ -0.98
NCBP3-204ENST00000574911 KLHDC10Q6PID8 442 aa8.91□□□□□ -0.98
NCBP3-204ENST00000574911 AMIGO2Q86SJ2 522 aa8.91□□□□□ -0.98
NCBP3-204ENST00000574911 STAG3L4Q8TBR4 150 aa8.91□□□□□ -0.98
NCBP3-204ENST00000574911 SPATA17Q96L03 361 aa8.91□□□□□ -0.98
NCBP3-204ENST00000574911 NSMCE3Q96MG7 304 aa8.91□□□□□ -0.98
NCBP3-204ENST00000574911 KCNA7Q96RP8 456 aa8.91□□□□□ -0.98
NCBP3-204ENST00000574911 GRIP2Q9C0E4 1043 aa8.91□□□□□ -0.98
NCBP3-204ENST00000574911 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.91□□□□□ -0.98
NCBP3-204ENST00000574911 NOL11Q9H8H0 719 aaKnown RBP8.91□□□□□ -0.98
NCBP3-204ENST00000574911 CCM2LQ9NUG4 571 aaPredicted RBP8.91□□□□□ -0.98
NCBP3-204ENST00000574911 POLG2Q9UHN1 485 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms