RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 FECHP22830 423 aa17.36■□□□□ 0.37
SMG6-214ENST00000573827 ACTN2P35609 894 aa17.36■□□□□ 0.37
SMG6-214ENST00000573827 CD86P42081 329 aa17.36■□□□□ 0.37
SMG6-214ENST00000573827 NOP2P46087 812 aaKnown RBP17.36■□□□□ 0.37
SMG6-214ENST00000573827 CCL7P80098 99 aa17.36■□□□□ 0.37
SMG6-214ENST00000573827 RAET1GQ6H3X3 334 aa17.36■□□□□ 0.37
SMG6-214ENST00000573827 TAF8Q7Z7C8 310 aa17.36■□□□□ 0.37
SMG6-214ENST00000573827 RHOT1Q8IXI2 618 aa17.36■□□□□ 0.37
SMG6-214ENST00000573827 CCNYQ8ND76 341 aa17.36■□□□□ 0.37
SMG6-214ENST00000573827 FAM46DQ8NEK8 389 aa17.36■□□□□ 0.37
SMG6-214ENST00000573827 LPCAT1Q8NF37 534 aa17.36■□□□□ 0.37
SMG6-214ENST00000573827 RNF25Q96BH1 459 aaPredicted RBP17.36■□□□□ 0.37
SMG6-214ENST00000573827 AP2M1Q96CW1 435 aa17.36■□□□□ 0.37
SMG6-214ENST00000573827 IMP4Q96G21 291 aaKnown RBP17.36■□□□□ 0.37
SMG6-214ENST00000573827 ZNF578Q96N58 590 aaPredicted RBP17.36■□□□□ 0.37
SMG6-214ENST00000573827 DCBLD2Q96PD2 775 aa17.36■□□□□ 0.37
SMG6-214ENST00000573827 CEP41Q9BYV8 373 aa17.36■□□□□ 0.37
SMG6-214ENST00000573827 CARS2Q9HA77 564 aaKnown RBP17.36■□□□□ 0.37
SMG6-214ENST00000573827 SATB2Q9UPW6 733 aa17.36■□□□□ 0.37
SMG6-214ENST00000573827 SSUH2Q9Y2M2 353 aa17.36■□□□□ 0.37
SMG6-214ENST00000573827 TTLL3Q9Y4R7 772 aa17.36■□□□□ 0.37
SMG6-214ENST00000573827 PCDHGA8Q9Y5G5 932 aa17.36■□□□□ 0.37
SMG6-214ENST00000573827 PCYT1BQ9Y5K3 369 aaPredicted RBP17.36■□□□□ 0.37
SMG6-214ENST00000573827 ALG6Q9Y672 507 aa17.36■□□□□ 0.37
SMG6-214ENST00000573827 RNF215Q9Y6U7 377 aa17.36■□□□□ 0.37
SMG6-214ENST00000573827 D6RAR5 112 aa17.35■□□□□ 0.37
SMG6-214ENST00000573827 FGF1P05230 155 aa17.35■□□□□ 0.37
SMG6-214ENST00000573827 MARCKSL1P49006 195 aa17.35■□□□□ 0.37
SMG6-214ENST00000573827 ERVPABLB-1P60509 514 aa17.35■□□□□ 0.37
SMG6-214ENST00000573827 TLE3Q04726 772 aa17.35■□□□□ 0.37
SMG6-214ENST00000573827 PDK1Q15118 436 aa17.35■□□□□ 0.37
SMG6-214ENST00000573827 PRKD1Q15139 912 aaPredicted RBP17.35■□□□□ 0.37
SMG6-214ENST00000573827 C14orf28Q4W4Y0 310 aa17.35■□□□□ 0.37
SMG6-214ENST00000573827 ZNF438Q7Z4V0 828 aa17.35■□□□□ 0.37
SMG6-214ENST00000573827 TRIM74Q86UV6 250 aa17.35■□□□□ 0.37
SMG6-214ENST00000573827 NRSN1Q8IZ57 195 aa17.35■□□□□ 0.37
SMG6-214ENST00000573827 OR6C4Q8NGE1 309 aa17.35■□□□□ 0.37
SMG6-214ENST00000573827 SLC46A1Q96NT5 459 aa17.35■□□□□ 0.37
SMG6-214ENST00000573827 BBC3Q96PG8 261 aaPredicted RBP17.35■□□□□ 0.37
SMG6-214ENST00000573827 RIOK2Q9BVS4 552 aaKnown RBP17.35■□□□□ 0.37
SMG6-214ENST00000573827 TRIM5Q9C035 493 aa17.35■□□□□ 0.37
SMG6-214ENST00000573827 BRD8Q9H0E9 1235 aa17.35■□□□□ 0.37
SMG6-214ENST00000573827 PRORYQ9H606 182 aa17.35■□□□□ 0.37
SMG6-214ENST00000573827 PLEKHM1Q9Y4G2 1056 aa17.35■□□□□ 0.37
SMG6-214ENST00000573827 ANKRD66B4E2M5 251 aa17.34■□□□□ 0.37
SMG6-214ENST00000573827 PSTPIP1O43586 416 aa17.34■□□□□ 0.37
SMG6-214ENST00000573827 RPLP0P05388 317 aaKnown RBP17.34■□□□□ 0.37
SMG6-214ENST00000573827 PNLIPP16233 465 aa17.34■□□□□ 0.37
SMG6-214ENST00000573827 GLB1P16278 677 aa17.34■□□□□ 0.37
SMG6-214ENST00000573827 PECAM1P16284 738 aaPredicted RBP17.34■□□□□ 0.37
SMG6-214ENST00000573827 AK4P27144 223 aaPredicted RBP17.34■□□□□ 0.37
SMG6-214ENST00000573827 ADCY8P40145 1251 aa17.34■□□□□ 0.37
SMG6-214ENST00000573827 MAGEA1P43355 309 aa17.34■□□□□ 0.37
SMG6-214ENST00000573827 ABCG1P45844 678 aa17.34■□□□□ 0.37
SMG6-214ENST00000573827 GPR1P46091 355 aa17.34■□□□□ 0.37
SMG6-214ENST00000573827 GNPDA1P46926 289 aa17.34■□□□□ 0.37
SMG6-214ENST00000573827 B4GALNT1Q00973 533 aa17.34■□□□□ 0.37
SMG6-214ENST00000573827 CTBSQ01459 385 aa17.34■□□□□ 0.37
SMG6-214ENST00000573827 SPIDRQ14159 915 aa17.34■□□□□ 0.37
SMG6-214ENST00000573827 NR1D2Q14995 579 aa17.34■□□□□ 0.37
SMG6-214ENST00000573827 SOWAHCQ53LP3 525 aaPredicted RBP17.34■□□□□ 0.37
SMG6-214ENST00000573827 C3orf38Q5JPI3 329 aa17.34■□□□□ 0.37
SMG6-214ENST00000573827 ZFYVE27Q5T4F4 411 aa17.34■□□□□ 0.37
SMG6-214ENST00000573827 HENMT1Q5T8I9 393 aaKnown RBP17.34■□□□□ 0.37
SMG6-214ENST00000573827 B4GALNT4Q76KP1 1039 aa17.34■□□□□ 0.37
SMG6-214ENST00000573827 TMPRSS9Q7Z410 1059 aa17.34■□□□□ 0.37
SMG6-214ENST00000573827 SPRED1Q7Z699 444 aa17.34■□□□□ 0.37
SMG6-214ENST00000573827 SPACA3Q8IXA5 215 aa17.34■□□□□ 0.37
SMG6-214ENST00000573827 LSMEM2Q8N112 164 aa17.34■□□□□ 0.37
SMG6-214ENST00000573827 NDUFAF2Q8N183 169 aa17.34■□□□□ 0.37
SMG6-214ENST00000573827 LIN37Q96GY3 246 aaPredicted RBP17.34■□□□□ 0.37
SMG6-214ENST00000573827 ZNF830Q96NB3 372 aaPredicted RBP17.34■□□□□ 0.37
SMG6-214ENST00000573827 RBSNQ9H1K0 784 aa17.34■□□□□ 0.37
SMG6-214ENST00000573827 SLC25A51Q9H1U9 297 aa17.34■□□□□ 0.37
SMG6-214ENST00000573827 LRRN3Q9H3W5 708 aa17.34■□□□□ 0.37
SMG6-214ENST00000573827 DDX56Q9NY93 547 aaKnown RBP17.34■□□□□ 0.37
SMG6-214ENST00000573827 TAAR2Q9P1P5 351 aa17.34■□□□□ 0.37
SMG6-214ENST00000573827 SAE1Q9UBE0 346 aaPredicted RBP17.34■□□□□ 0.37
SMG6-214ENST00000573827 DNPEPQ9ULA0 475 aa17.34■□□□□ 0.37
SMG6-214ENST00000573827 TMEM98Q9Y2Y6 226 aa17.34■□□□□ 0.37
SMG6-214ENST00000573827 RCCD1A6NED2 376 aa17.33■□□□□ 0.36
SMG6-214ENST00000573827 FADS2P1A8MWK0 482 aa17.33■□□□□ 0.36
SMG6-214ENST00000573827 CDRT15L2A8MXV6 281 aa17.33■□□□□ 0.36
SMG6-214ENST00000573827 B4DGG1 531 aa17.33■□□□□ 0.36
SMG6-214ENST00000573827 NUDT21O43809 227 aaKnown RBP17.33■□□□□ 0.36
SMG6-214ENST00000573827 KRT10P13645 584 aa17.33■□□□□ 0.36
SMG6-214ENST00000573827 ZFXP17010 805 aaPredicted RBP17.33■□□□□ 0.36
SMG6-214ENST00000573827 CD68P34810 354 aaPredicted RBP17.33■□□□□ 0.36
SMG6-214ENST00000573827 SPINT3P49223 89 aa17.33■□□□□ 0.36
SMG6-214ENST00000573827 ZNF75DP51815 510 aa17.33■□□□□ 0.36
SMG6-214ENST00000573827 EPHB1P54762 984 aa17.33■□□□□ 0.36
SMG6-214ENST00000573827 MAZP56270 477 aaKnown RBP17.33■□□□□ 0.36
SMG6-214ENST00000573827 DYNLT1P63172 113 aa17.33■□□□□ 0.36
SMG6-214ENST00000573827 ZFP36L1Q07352 338 aaKnown RBP17.33■□□□□ 0.36
SMG6-214ENST00000573827 AP1B1Q10567 949 aa17.33■□□□□ 0.36
SMG6-214ENST00000573827 WASHC5Q12768 1159 aa17.33■□□□□ 0.36
SMG6-214ENST00000573827 SLC14A2Q15849 920 aa17.33■□□□□ 0.36
SMG6-214ENST00000573827 PYCR3Q53H96 274 aa17.33■□□□□ 0.36
SMG6-214ENST00000573827 SPOCD1Q6ZMY3 1216 aa17.33■□□□□ 0.36
SMG6-214ENST00000573827 RFX6Q8HWS3 928 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms