RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 LBPP18428 481 aa15.61■□□□□ 0.09
NUP88-207ENST00000573584 FDXRP22570 491 aa15.61■□□□□ 0.09
NUP88-207ENST00000573584 CTBSQ01459 385 aa15.61■□□□□ 0.09
NUP88-207ENST00000573584 OR4D1Q15615 310 aa15.61■□□□□ 0.09
NUP88-207ENST00000573584 ATP6AP1Q15904 470 aa15.61■□□□□ 0.09
NUP88-207ENST00000573584 CYP51A1Q16850 503 aa15.61■□□□□ 0.09
NUP88-207ENST00000573584 SCD5Q86SK9 330 aa15.61■□□□□ 0.09
NUP88-207ENST00000573584 ZNF354CQ86Y25 554 aa15.61■□□□□ 0.09
NUP88-207ENST00000573584 GOLM1Q8NBJ4 401 aa15.61■□□□□ 0.09
NUP88-207ENST00000573584 TRPV3Q8NET8 790 aa15.61■□□□□ 0.09
NUP88-207ENST00000573584 UXTQ9UBK9 157 aaPredicted RBP15.61■□□□□ 0.09
NUP88-207ENST00000573584 BTRCQ9Y297 605 aa15.61■□□□□ 0.09
NUP88-207ENST00000573584 CCL15-CCL14A0A0B4J2E2 113 aa15.61■□□□□ 0.09
NUP88-207ENST00000573584 INPP4BO15327 924 aa15.61■□□□□ 0.09
NUP88-207ENST00000573584 MATN4O95460 622 aa15.61■□□□□ 0.09
NUP88-207ENST00000573584 HAPLN1P10915 354 aaPredicted RBP15.61■□□□□ 0.09
NUP88-207ENST00000573584 GFAPP14136 432 aa15.61■□□□□ 0.09
NUP88-207ENST00000573584 GRIK1P39086 918 aa15.61■□□□□ 0.09
NUP88-207ENST00000573584 CCL15Q16663 113 aa15.61■□□□□ 0.09
NUP88-207ENST00000573584 KANK2Q63ZY3 851 aa15.61■□□□□ 0.09
NUP88-207ENST00000573584 AGMOQ6ZNB7 445 aa15.61■□□□□ 0.09
NUP88-207ENST00000573584 CROCCP3Q8IVE0 287 aa15.61■□□□□ 0.09
NUP88-207ENST00000573584 FNDC8Q8TC99 324 aa15.61■□□□□ 0.09
NUP88-207ENST00000573584 PLGRKTQ9HBL7 147 aa15.61■□□□□ 0.09
NUP88-207ENST00000573584 POLG2Q9UHN1 485 aa15.61■□□□□ 0.09
NUP88-207ENST00000573584 CLOCKO15516 846 aa15.6■□□□□ 0.09
NUP88-207ENST00000573584 LDB2O43679 373 aa15.6■□□□□ 0.09
NUP88-207ENST00000573584 RASAL1O95294 804 aa15.6■□□□□ 0.09
NUP88-207ENST00000573584 MTHFD1P11586 935 aaKnown RBP15.6■□□□□ 0.09
NUP88-207ENST00000573584 MTHFD2P13995 350 aa15.6■□□□□ 0.09
NUP88-207ENST00000573584 ENTPD1P49961 510 aa15.6■□□□□ 0.09
NUP88-207ENST00000573584 DNAJB14Q8TBM8 379 aa15.6■□□□□ 0.09
NUP88-207ENST00000573584 MIPOL1Q8TD10 442 aa15.6■□□□□ 0.09
NUP88-207ENST00000573584 FBXL20Q96IG2 436 aa15.6■□□□□ 0.09
NUP88-207ENST00000573584 PKMYT1Q99640 499 aa15.6■□□□□ 0.09
NUP88-207ENST00000573584 CXorf21Q9HAI6 301 aa15.6■□□□□ 0.09
NUP88-207ENST00000573584 NMUR1Q9HB89 426 aa15.6■□□□□ 0.09
NUP88-207ENST00000573584 PCDHA9Q9Y5H5 950 aa15.6■□□□□ 0.09
NUP88-207ENST00000573584 CROCCQ5TZA2 2017 aa15.6■□□□□ 0.09
NUP88-207ENST00000573584 NYNRINQ9P2P1 1898 aaKnown RBP15.6■□□□□ 0.09
NUP88-207ENST00000573584 WASH4PA8MWX3 477 aa15.6■□□□□ 0.09
NUP88-207ENST00000573584 ZNF701M0R085 212 aaPredicted RBP15.6■□□□□ 0.09
NUP88-207ENST00000573584 EI24O14681 340 aa15.6■□□□□ 0.09
NUP88-207ENST00000573584 ACOX3O15254 700 aa15.6■□□□□ 0.09
NUP88-207ENST00000573584 GLP2RO95838 553 aa15.6■□□□□ 0.09
NUP88-207ENST00000573584 SOX11P35716 441 aa15.6■□□□□ 0.09
NUP88-207ENST00000573584 TIAL1Q01085 375 aaKnown RBP eCLIP15.6■□□□□ 0.09
NUP88-207ENST00000573584 TMTC4Q5T4D3 741 aa15.6■□□□□ 0.09
NUP88-207ENST00000573584 PIK3R6Q5UE93 754 aa15.6■□□□□ 0.09
NUP88-207ENST00000573584 BLOC1S3Q6QNY0 202 aa15.6■□□□□ 0.09
NUP88-207ENST00000573584 UMODL1-AS1Q8N2C9 162 aa15.6■□□□□ 0.09
NUP88-207ENST00000573584 BBS5Q8N3I7 341 aa15.6■□□□□ 0.09
NUP88-207ENST00000573584 SEPT8Q92599 483 aa15.6■□□□□ 0.09
NUP88-207ENST00000573584 MS4A4AQ96JQ5 239 aa15.6■□□□□ 0.09
NUP88-207ENST00000573584 RPL10LQ96L21 214 aaKnown RBP15.6■□□□□ 0.09
NUP88-207ENST00000573584 SGIP1Q9BQI5 828 aa15.6■□□□□ 0.09
NUP88-207ENST00000573584 NPLQ9BXD5 320 aaPredicted RBP15.6■□□□□ 0.09
NUP88-207ENST00000573584 HIPK3Q9H422 1215 aa15.6■□□□□ 0.09
NUP88-207ENST00000573584 SP110Q9HB58 689 aa15.6■□□□□ 0.09
NUP88-207ENST00000573584 CHCHD3Q9NX63 227 aaKnown RBP15.6■□□□□ 0.09
NUP88-207ENST00000573584 M0QZ92 97 aa15.59■□□□□ 0.09
NUP88-207ENST00000573584 CD3EAPO15446 510 aaKnown RBP15.59■□□□□ 0.09
NUP88-207ENST00000573584 CLASP2O75122 1294 aaKnown RBP15.59■□□□□ 0.09
NUP88-207ENST00000573584 GPIP06744 558 aa15.59■□□□□ 0.09
NUP88-207ENST00000573584 IDO1P14902 403 aa15.59■□□□□ 0.09
NUP88-207ENST00000573584 ZNF37AP17032 561 aaPredicted RBP15.59■□□□□ 0.09
NUP88-207ENST00000573584 CPT1AP50416 773 aa15.59■□□□□ 0.09
NUP88-207ENST00000573584 APLP1P51693 650 aa15.59■□□□□ 0.09
NUP88-207ENST00000573584 DIO3P55073 304 aa15.59■□□□□ 0.09
NUP88-207ENST00000573584 PTPRCAPQ14761 206 aa15.59■□□□□ 0.09
NUP88-207ENST00000573584 C16orf72Q14CZ0 275 aa15.59■□□□□ 0.09
NUP88-207ENST00000573584 SPRED1Q7Z699 444 aa15.59■□□□□ 0.09
NUP88-207ENST00000573584 DCP1BQ8IZD4 617 aaKnown RBP15.59■□□□□ 0.09
NUP88-207ENST00000573584 PSMG2Q969U7 264 aa15.59■□□□□ 0.09
NUP88-207ENST00000573584 GIT1Q9Y2X7 761 aa15.59■□□□□ 0.09
NUP88-207ENST00000573584 FADS3Q9Y5Q0 445 aa15.59■□□□□ 0.09
NUP88-207ENST00000573584 A0A1W2PQH9 124 aa15.59■□□□□ 0.09
NUP88-207ENST00000573584 TRIM64A6NGJ6 449 aa15.59■□□□□ 0.09
NUP88-207ENST00000573584 H3BMM5 538 aa15.59■□□□□ 0.09
NUP88-207ENST00000573584 GOT2P00505 430 aaKnown RBP15.59■□□□□ 0.09
NUP88-207ENST00000573584 POMCP01189 267 aa15.59■□□□□ 0.09
NUP88-207ENST00000573584 FCGR1AP12314 374 aa15.59■□□□□ 0.09
NUP88-207ENST00000573584 NFYCQ13952 458 aa15.59■□□□□ 0.09
NUP88-207ENST00000573584 RABL3Q5HYI8 236 aa15.59■□□□□ 0.09
NUP88-207ENST00000573584 ABRAXAS1Q6UWZ7 409 aa15.59■□□□□ 0.09
NUP88-207ENST00000573584 OFCC1Q8IZS5 231 aa15.59■□□□□ 0.09
NUP88-207ENST00000573584 VPS33AQ96AX1 596 aa15.59■□□□□ 0.09
NUP88-207ENST00000573584 C1orf74Q96LT6 269 aa15.59■□□□□ 0.09
NUP88-207ENST00000573584 ALG2Q9H553 416 aa15.59■□□□□ 0.09
NUP88-207ENST00000573584 CD320Q9NPF0 282 aa15.59■□□□□ 0.09
NUP88-207ENST00000573584 FNIP2Q9P278 1114 aa15.59■□□□□ 0.09
NUP88-207ENST00000573584 A0A1B0GTL3 188 aa15.58■□□□□ 0.09
NUP88-207ENST00000573584 GIPC1O14908 333 aa15.58■□□□□ 0.09
NUP88-207ENST00000573584 CRCPO75575 148 aa15.58■□□□□ 0.09
NUP88-207ENST00000573584 GSK3BP49841 420 aa15.58■□□□□ 0.09
NUP88-207ENST00000573584 MRPS6P82932 125 aaKnown RBP15.58■□□□□ 0.09
NUP88-207ENST00000573584 NRG1Q02297 640 aaPredicted RBP15.58■□□□□ 0.09
NUP88-207ENST00000573584 FOXM1Q08050 763 aa15.58■□□□□ 0.09
NUP88-207ENST00000573584 PMS2P3Q13401 168 aa15.58■□□□□ 0.09
NUP88-207ENST00000573584 FUT11Q495W5 492 aa15.58■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms