RNA–Protein interactions for RNA: ENST00000566915.5

LPCAT2-208, Transcript of lysophosphatidylcholine acyltransferase 2, humanhuman

TSL 1 (best)

Gene LPCAT2, Length 5,285 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT2-208ENST00000566915 TYMPP19971 482 aa4.35□□□□□ -1.71
LPCAT2-208ENST00000566915 UBA1P22314 1058 aaKnown RBP4.35□□□□□ -1.71
LPCAT2-208ENST00000566915 MYL9P24844 172 aa4.35□□□□□ -1.71
LPCAT2-208ENST00000566915 L1CAMP32004 1257 aa4.35□□□□□ -1.71
LPCAT2-208ENST00000566915 ICAM3P32942 547 aa4.35□□□□□ -1.71
LPCAT2-208ENST00000566915 RCVRNP35243 200 aa4.35□□□□□ -1.71
LPCAT2-208ENST00000566915 ADRA1BP35368 520 aa4.35□□□□□ -1.71
LPCAT2-208ENST00000566915 ATP5C1P36542 298 aaKnown RBP4.35□□□□□ -1.71
LPCAT2-208ENST00000566915 FLT3P36888 993 aa4.35□□□□□ -1.71
LPCAT2-208ENST00000566915 THPOP40225 353 aa4.35□□□□□ -1.71
LPCAT2-208ENST00000566915 GNPDA1P46926 289 aa4.35□□□□□ -1.71
LPCAT2-208ENST00000566915 RPL7AP62424 266 aaKnown RBP4.35□□□□□ -1.71
LPCAT2-208ENST00000566915 SCN1BQ07699 218 aa4.35□□□□□ -1.71
LPCAT2-208ENST00000566915 LCP2Q13094 533 aa4.35□□□□□ -1.71
LPCAT2-208ENST00000566915 SEMA5AQ13591 1074 aa4.35□□□□□ -1.71
LPCAT2-208ENST00000566915 CAPSQ13938 189 aa4.35□□□□□ -1.71
LPCAT2-208ENST00000566915 C5orf22Q49AR2 442 aa4.35□□□□□ -1.71
LPCAT2-208ENST00000566915 AADACL2Q6P093 401 aa4.35□□□□□ -1.71
LPCAT2-208ENST00000566915 ARHGAP36Q6ZRI8 547 aa4.35□□□□□ -1.71
LPCAT2-208ENST00000566915 RAB43Q86YS6 212 aa4.35□□□□□ -1.71
LPCAT2-208ENST00000566915 SLC41A1Q8IVJ1 513 aa4.35□□□□□ -1.71
LPCAT2-208ENST00000566915 CARNMT1Q8N4J0 409 aa4.35□□□□□ -1.71
LPCAT2-208ENST00000566915 PLD5Q8N7P1 536 aa4.35□□□□□ -1.71
LPCAT2-208ENST00000566915 UBR7Q8N806 425 aa4.35□□□□□ -1.71
LPCAT2-208ENST00000566915 OR4L1Q8NH43 312 aa4.35□□□□□ -1.71
LPCAT2-208ENST00000566915 ZNF420Q8TAQ5 688 aaPredicted RBP4.35□□□□□ -1.71
LPCAT2-208ENST00000566915 FBXO30Q8TB52 745 aa4.35□□□□□ -1.71
LPCAT2-208ENST00000566915 EEF1AKMT1Q8WVE0 214 aa4.35□□□□□ -1.71
LPCAT2-208ENST00000566915 BRI3BPQ8WY22 251 aa4.35□□□□□ -1.71
LPCAT2-208ENST00000566915 SLC47A1Q96FL8 570 aa4.35□□□□□ -1.71
LPCAT2-208ENST00000566915 CPB2Q96IY4 423 aa4.35□□□□□ -1.71
LPCAT2-208ENST00000566915 CELF6Q96J87 481 aaKnown RBP4.35□□□□□ -1.71
LPCAT2-208ENST00000566915 SERAC1Q96JX3 654 aa4.35□□□□□ -1.71
LPCAT2-208ENST00000566915 GBA3Q9H227 469 aa4.35□□□□□ -1.71
LPCAT2-208ENST00000566915 CXorf21Q9HAI6 301 aa4.35□□□□□ -1.71
LPCAT2-208ENST00000566915 MKS1Q9NXB0 559 aa4.35□□□□□ -1.71
LPCAT2-208ENST00000566915 TAS2R1Q9NYW7 299 aa4.35□□□□□ -1.71
LPCAT2-208ENST00000566915 CCDC59Q9P031 241 aaKnown RBP4.35□□□□□ -1.71
LPCAT2-208ENST00000566915 KLK14Q9P0G3 267 aa4.35□□□□□ -1.71
LPCAT2-208ENST00000566915 MARCH2Q9P0N8 246 aa4.35□□□□□ -1.71
LPCAT2-208ENST00000566915 TRPC4Q9UBN4 977 aa4.35□□□□□ -1.71
LPCAT2-208ENST00000566915 FAM198AQ9UFP1 575 aa4.35□□□□□ -1.71
LPCAT2-208ENST00000566915 SAMHD1Q9Y3Z3 626 aaKnown RBP4.35□□□□□ -1.71
LPCAT2-208ENST00000566915 IRAK3Q9Y616 596 aa4.35□□□□□ -1.71
LPCAT2-208ENST00000566915 COL2A1P02458 1487 aaPredicted RBP4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 SLC7A4O43246 635 aa4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 TMCC2O75069 709 aa4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 LRCH4O75427 683 aa4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 PIGRP01833 764 aa4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 CSH1P0DML2 217 aa4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 CSH2P0DML3 217 aa4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 DARSP14868 501 aaKnown RBP4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 HPGDP15428 266 aa4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 AOC1P19801 751 aa4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 PSMA1P25786 263 aaKnown RBP4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 EPHA3P29320 983 aa4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 FMO4P31512 558 aa4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 SDC2P34741 201 aa4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 PLK1P53350 603 aa4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 TMEM62Q0P6H9 643 aa4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 ABRQ12979 859 aa4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 ORC1Q13415 861 aa4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 PTGES3Q15185 160 aaKnown RBP4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 ZBED5Q49AG3 693 aa4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 FGD3Q5JSP0 725 aa4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 PLET1Q6UQ28 207 aa4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 CRTC3Q6UUV7 619 aa4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 TIFABQ6ZNK6 161 aa4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 PEG10Q86TG7 708 aaKnown RBP4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 SLCO6A1Q86UG4 719 aa4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 MON1AQ86VX9 555 aa4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 XYLT1Q86Y38 959 aa4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 TRIM48Q8IWZ4 208 aa4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 COLGALT2Q8IYK4 626 aa4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 SLC35B2Q8TB61 432 aa4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 STYXQ8WUJ0 223 aa4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 USP7Q93009 1102 aa4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 ASB9Q96DX5 294 aa4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 REXO5Q96IC2 774 aaKnown RBP4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 TPD52L3Q96J77 140 aa4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 VPS35Q96QK1 796 aa4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 BBS4Q96RK4 519 aa4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 SEMA4BQ9NPR2 832 aaPredicted RBP4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 RPRD1BQ9NQG5 326 aaKnown RBP4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 DDX4Q9NQI0 724 aaKnown RBP4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 INTS10Q9NVR2 710 aaKnown RBP4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 COMMD9Q9P000 198 aa4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 SUCOQ9UBS9 1254 aaKnown RBP4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 KLQ9UEF7 1012 aa4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 ZNF221Q9UK13 617 aa4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 CNTN6Q9UQ52 1028 aa4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 POMPQ9Y244 141 aa4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 KCNE2Q9Y6J6 123 aa4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 SYNDIG1LA6NDD5 238 aa4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 URADA6NGE7 173 aa4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 CAPN8A6NHC0 703 aa4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 OR6C75A6NL08 312 aa4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 RFXANKO14593 260 aa4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 SEPT4O43236 478 aa4.34□□□□□ -1.71
LPCAT2-208ENST00000566915 RPP40O75818 363 aaKnown RBP4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms