RNA–Protein interactions for RNA: ENST00000565636.5

CDH13-207, Transcript of cadherin 13, humanhuman

TSL 5 BASIC

Gene CDH13, Length 810 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-207ENST00000565636 PTPN13Q12923 2485 aa8.37□□□□□ -1.07
CDH13-207ENST00000565636 TSPAN11A1L157 253 aa8.37□□□□□ -1.07
CDH13-207ENST00000565636 NUDT21O43809 227 aaKnown RBP8.37□□□□□ -1.07
CDH13-207ENST00000565636 RAMP2O60895 175 aa8.37□□□□□ -1.07
CDH13-207ENST00000565636 NEBLO76041 1014 aa8.37□□□□□ -1.07
CDH13-207ENST00000565636 IGSF6O95976 241 aa8.37□□□□□ -1.07
CDH13-207ENST00000565636 TNFP01375 233 aa8.37□□□□□ -1.07
CDH13-207ENST00000565636 CTSEP14091 401 aa8.37□□□□□ -1.07
CDH13-207ENST00000565636 TSHRP16473 764 aa8.37□□□□□ -1.07
CDH13-207ENST00000565636 MMP8P22894 467 aa8.37□□□□□ -1.07
CDH13-207ENST00000565636 NFKBIAP25963 317 aa8.37□□□□□ -1.07
CDH13-207ENST00000565636 MAPK1P28482 360 aa8.37□□□□□ -1.07
CDH13-207ENST00000565636 SDC4P31431 198 aa8.37□□□□□ -1.07
CDH13-207ENST00000565636 SLC5A2P31639 672 aa8.37□□□□□ -1.07
CDH13-207ENST00000565636 TRIM23P36406 574 aa8.37□□□□□ -1.07
CDH13-207ENST00000565636 STAT1P42224 750 aa8.37□□□□□ -1.07
CDH13-207ENST00000565636 DNA2P51530 1060 aa8.37□□□□□ -1.07
CDH13-207ENST00000565636 ZNF135P52742 658 aaPredicted RBP8.37□□□□□ -1.07
CDH13-207ENST00000565636 RNASE9P60153 205 aaKnown RBP8.37□□□□□ -1.07
CDH13-207ENST00000565636 IKZF1Q13422 519 aa8.37□□□□□ -1.07
CDH13-207ENST00000565636 MTM1Q13496 603 aa8.37□□□□□ -1.07
CDH13-207ENST00000565636 DEFB133Q30KQ1 61 aa8.37□□□□□ -1.07
CDH13-207ENST00000565636 PARP15Q460N3 678 aa8.37□□□□□ -1.07
CDH13-207ENST00000565636 FAM102AQ5T9C2 384 aaPredicted RBP8.37□□□□□ -1.07
CDH13-207ENST00000565636 ISM2Q6H9L7 571 aa8.37□□□□□ -1.07
CDH13-207ENST00000565636 DPY19L2P1Q6NXN4 242 aa8.37□□□□□ -1.07
CDH13-207ENST00000565636 LINGO4Q6UY18 593 aa8.37□□□□□ -1.07
CDH13-207ENST00000565636 ATG14Q6ZNE5 492 aa8.37□□□□□ -1.07
CDH13-207ENST00000565636 USP53Q70EK8 1073 aa8.37□□□□□ -1.07
CDH13-207ENST00000565636 TFAP2DQ7Z6R9 452 aa8.37□□□□□ -1.07
CDH13-207ENST00000565636 DNAAF5Q86Y56 855 aa8.37□□□□□ -1.07
CDH13-207ENST00000565636 RAVER1Q8IY67 606 aaKnown RBP8.37□□□□□ -1.07
CDH13-207ENST00000565636 UMODL1-AS1Q8N2C9 162 aa8.37□□□□□ -1.07
CDH13-207ENST00000565636 TP53I13Q8NBR0 393 aaPredicted RBP8.37□□□□□ -1.07
CDH13-207ENST00000565636 OR7D4Q8NG98 312 aa8.37□□□□□ -1.07
CDH13-207ENST00000565636 GRIN3AQ8TCU5 1115 aa8.37□□□□□ -1.07
CDH13-207ENST00000565636 VOPP1Q96AW1 172 aa8.37□□□□□ -1.07
CDH13-207ENST00000565636 KLHL32Q96NJ5 620 aa8.37□□□□□ -1.07
CDH13-207ENST00000565636 CMKLR1Q99788 373 aa8.37□□□□□ -1.07
CDH13-207ENST00000565636 LRRC61Q9BV99 259 aa8.37□□□□□ -1.07
CDH13-207ENST00000565636 NAA15Q9BXJ9 866 aaKnown RBP8.37□□□□□ -1.07
CDH13-207ENST00000565636 CLPBQ9H078 707 aa8.37□□□□□ -1.07
CDH13-207ENST00000565636 CDH19Q9H159 772 aa8.37□□□□□ -1.07
CDH13-207ENST00000565636 LRRN3Q9H3W5 708 aa8.37□□□□□ -1.07
CDH13-207ENST00000565636 ZDHHC6Q9H6R6 413 aa8.37□□□□□ -1.07
CDH13-207ENST00000565636 CATSPERBQ9H7T0 1116 aa8.37□□□□□ -1.07
CDH13-207ENST00000565636 FZD3Q9NPG1 666 aa8.37□□□□□ -1.07
CDH13-207ENST00000565636 ACP6Q9NPH0 428 aa8.37□□□□□ -1.07
CDH13-207ENST00000565636 AKAP7Q9P0M2 348 aaPredicted RBP8.37□□□□□ -1.07
CDH13-207ENST00000565636 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.37□□□□□ -1.07
CDH13-207ENST00000565636 A0A1W2PNU3 283 aaPredicted RBP8.36□□□□□ -1.07
CDH13-207ENST00000565636 DBX1A6NMT0 343 aa8.36□□□□□ -1.07
CDH13-207ENST00000565636 D6RAR5 112 aa8.36□□□□□ -1.07
CDH13-207ENST00000565636 KRIT1O00522 736 aa8.36□□□□□ -1.07
CDH13-207ENST00000565636 HGSO14964 777 aaPredicted RBP8.36□□□□□ -1.07
CDH13-207ENST00000565636 MUSKO15146 869 aa8.36□□□□□ -1.07
CDH13-207ENST00000565636 FGF10O15520 208 aaPredicted RBP8.36□□□□□ -1.07
CDH13-207ENST00000565636 NOBOXO60393 691 aa8.36□□□□□ -1.07
CDH13-207ENST00000565636 NTRK1P04629 796 aa8.36□□□□□ -1.07
CDH13-207ENST00000565636 CYP1A1P04798 512 aaPredicted RBP8.36□□□□□ -1.07
CDH13-207ENST00000565636 PLEKP08567 350 aaPredicted RBP8.36□□□□□ -1.07
CDH13-207ENST00000565636 DESP17661 470 aa8.36□□□□□ -1.07
CDH13-207ENST00000565636 TEAD1P28347 426 aa8.36□□□□□ -1.07
CDH13-207ENST00000565636 UGT1A5P35504 534 aa8.36□□□□□ -1.07
CDH13-207ENST00000565636 FLT3P36888 993 aa8.36□□□□□ -1.07
CDH13-207ENST00000565636 CD96P40200 585 aa8.36□□□□□ -1.07
CDH13-207ENST00000565636 GPR3P46089 330 aa8.36□□□□□ -1.07
CDH13-207ENST00000565636 MTIF2P46199 727 aaKnown RBP8.36□□□□□ -1.07
CDH13-207ENST00000565636 NDST2P52849 883 aa8.36□□□□□ -1.07
CDH13-207ENST00000565636 STX17P56962 302 aa8.36□□□□□ -1.07
CDH13-207ENST00000565636 TRA2AQ13595 282 aaKnown RBP eCLIP8.36□□□□□ -1.07
CDH13-207ENST00000565636 DRAP1Q14919 205 aaPredicted RBP8.36□□□□□ -1.07
CDH13-207ENST00000565636 NFATC4Q14934 902 aa8.36□□□□□ -1.07
CDH13-207ENST00000565636 NR1D2Q14995 579 aa8.36□□□□□ -1.07
CDH13-207ENST00000565636 UGP2Q16851 508 aa8.36□□□□□ -1.07
CDH13-207ENST00000565636 VWA3BQ502W6 1294 aa8.36□□□□□ -1.07
CDH13-207ENST00000565636 ZNF542PQ5EBM4 170 aa8.36□□□□□ -1.07
CDH13-207ENST00000565636 KLHDC7AQ5VTJ3 777 aa8.36□□□□□ -1.07
CDH13-207ENST00000565636 ERAP2Q6P179 960 aa8.36□□□□□ -1.07
CDH13-207ENST00000565636 STK35Q8TDR2 534 aa8.36□□□□□ -1.07
CDH13-207ENST00000565636 TBC1D31Q96DN5 1066 aa8.36□□□□□ -1.07
CDH13-207ENST00000565636 MYOCQ99972 504 aa8.36□□□□□ -1.07
CDH13-207ENST00000565636 NCAPGQ9BPX3 1015 aa8.36□□□□□ -1.07
CDH13-207ENST00000565636 TUBGCP2Q9BSJ2 902 aa8.36□□□□□ -1.07
CDH13-207ENST00000565636 APOOQ9BUR5 198 aa8.36□□□□□ -1.07
CDH13-207ENST00000565636 ADAMTS6Q9UKP5 1117 aa8.36□□□□□ -1.07
CDH13-207ENST00000565636 PCDHGA3Q9Y5H0 932 aa8.36□□□□□ -1.07
CDH13-207ENST00000565636 HEMK1Q9Y5R4 338 aaPredicted RBP8.36□□□□□ -1.07
CDH13-207ENST00000565636 BOD1L1Q8NFC6 3051 aa8.36□□□□□ -1.07
CDH13-207ENST00000565636 C2CD4BA6NLJ0 364 aa8.35□□□□□ -1.07
CDH13-207ENST00000565636 SIGLEC16A6NMB1 481 aa8.35□□□□□ -1.07
CDH13-207ENST00000565636 RNF103O00237 685 aa8.35□□□□□ -1.07
CDH13-207ENST00000565636 ARHGAP6O43182 974 aa8.35□□□□□ -1.07
CDH13-207ENST00000565636 SUV39H1O43463 412 aa8.35□□□□□ -1.07
CDH13-207ENST00000565636 LRIG2O94898 1065 aa8.35□□□□□ -1.07
CDH13-207ENST00000565636 UGT2B4P06133 528 aa8.35□□□□□ -1.07
CDH13-207ENST00000565636 UCHL3P15374 230 aa8.35□□□□□ -1.07
CDH13-207ENST00000565636 TFE3P19532 575 aaPredicted RBP8.35□□□□□ -1.07
CDH13-207ENST00000565636 XPAP23025 273 aaPredicted RBP8.35□□□□□ -1.07
CDH13-207ENST00000565636 EEF1GP26641 437 aaKnown RBP8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms